RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 EIF4A2Q14240 407 aaKnown RBP13.35□□□□□ -0.27
CPSF7-217ENST00000537162 PSMD1Q99460 953 aa13.35□□□□□ -0.27
CPSF7-217ENST00000537162 COL25A1Q9BXS0 654 aaPredicted RBP13.35□□□□□ -0.27
CPSF7-217ENST00000537162 RANBP2P49792 3224 aaKnown RBP13.35□□□□□ -0.27
CPSF7-217ENST00000537162 UNC80Q8N2C7 3258 aa13.34□□□□□ -0.27
CPSF7-217ENST00000537162 PLEKHO1Q53GL0 409 aaPredicted RBP13.34□□□□□ -0.27
CPSF7-217ENST00000537162 CHRDL2Q6WN34 429 aa13.34□□□□□ -0.27
CPSF7-217ENST00000537162 SETDB2Q96T68 719 aa13.34□□□□□ -0.27
CPSF7-217ENST00000537162 GBA2Q9HCG7 927 aaPredicted RBP13.34□□□□□ -0.27
CPSF7-217ENST00000537162 RBM27Q9P2N5 1060 aaKnown RBP13.34□□□□□ -0.27
CPSF7-217ENST00000537162 POLR2AP24928 1970 aaKnown RBP13.34□□□□□ -0.27
CPSF7-217ENST00000537162 KLRG2A4D1S0 409 aaPredicted RBP13.33□□□□□ -0.28
CPSF7-217ENST00000537162 GMPSP49915 693 aaPredicted RBP13.33□□□□□ -0.28
CPSF7-217ENST00000537162 LARGE2Q8N3Y3 721 aa13.33□□□□□ -0.28
CPSF7-217ENST00000537162 UBR2Q8IWV8 1755 aa13.32□□□□□ -0.28
CPSF7-217ENST00000537162 CEP290O15078 2479 aa13.31□□□□□ -0.28
CPSF7-217ENST00000537162 A0A087WZG4 1122 aa13.31□□□□□ -0.28
CPSF7-217ENST00000537162 GPR25O00155 361 aa13.31□□□□□ -0.28
CPSF7-217ENST00000537162 CAMTA2O94983 1202 aa13.31□□□□□ -0.28
CPSF7-217ENST00000537162 CXCL9Q07325 125 aa13.31□□□□□ -0.28
CPSF7-217ENST00000537162 ZC3H15Q8WU90 426 aaKnown RBP13.31□□□□□ -0.28
CPSF7-217ENST00000537162 R3HDMLQ9H3Y0 253 aa13.31□□□□□ -0.28
CPSF7-217ENST00000537162 ZNF330Q9Y3S2 320 aaPredicted RBP13.31□□□□□ -0.28
CPSF7-217ENST00000537162 NPC1L1Q9UHC9 1359 aa13.31□□□□□ -0.28
CPSF7-217ENST00000537162 ADM5C9JUS6 153 aa13.3□□□□□ -0.28
CPSF7-217ENST00000537162 RASAL3Q86YV0 1011 aa13.3□□□□□ -0.28
CPSF7-217ENST00000537162 C2orf69Q8N8R5 385 aa13.3□□□□□ -0.28
CPSF7-217ENST00000537162 LGR6Q9HBX8 967 aa13.3□□□□□ -0.28
CPSF7-217ENST00000537162 C1orf141Q5JVX7 400 aa13.29□□□□□ -0.28
CPSF7-217ENST00000537162 NIM1KQ8IY84 436 aa13.29□□□□□ -0.28
CPSF7-217ENST00000537162 TESK2Q96S53 571 aa13.29□□□□□ -0.28
CPSF7-217ENST00000537162 CARD11Q9BXL7 1154 aa13.29□□□□□ -0.28
CPSF7-217ENST00000537162 SLC52A2Q9HAB3 445 aa13.29□□□□□ -0.28
CPSF7-217ENST00000537162 POLKQ9UBT6 870 aa13.29□□□□□ -0.28
CPSF7-217ENST00000537162 SOX1O00570 391 aaPredicted RBP13.28□□□□□ -0.28
CPSF7-217ENST00000537162 NBPF5PQ86XG9 351 aaPredicted RBP13.28□□□□□ -0.28
CPSF7-217ENST00000537162 AEBP1Q8IUX7 1158 aa13.28□□□□□ -0.28
CPSF7-217ENST00000537162 AOC3Q16853 763 aa13.27□□□□□ -0.29
CPSF7-217ENST00000537162 AMOTQ4VCS5 1084 aa13.27□□□□□ -0.29
CPSF7-217ENST00000537162 MRC1P22897 1456 aa13.27□□□□□ -0.29
CPSF7-217ENST00000537162 KIAA0100Q14667 2235 aaKnown RBP13.27□□□□□ -0.29
CPSF7-217ENST00000537162 EGFRP00533 1210 aa13.26□□□□□ -0.29
CPSF7-217ENST00000537162 ALDH1B1P30837 517 aa13.26□□□□□ -0.29
CPSF7-217ENST00000537162 NCBP3Q53F19 620 aaKnown RBP13.26□□□□□ -0.29
CPSF7-217ENST00000537162 INTS3Q68E01 1043 aaKnown RBP13.26□□□□□ -0.29
CPSF7-217ENST00000537162 KRT26Q7Z3Y9 468 aa13.26□□□□□ -0.29
CPSF7-217ENST00000537162 VSIG10Q8N0Z9 540 aa13.26□□□□□ -0.29
CPSF7-217ENST00000537162 CARD14Q9BXL6 1004 aa13.26□□□□□ -0.29
CPSF7-217ENST00000537162 FAM177BA6PVY3 158 aa13.25□□□□□ -0.29
CPSF7-217ENST00000537162 PPIP5K2O43314 1243 aa13.25□□□□□ -0.29
CPSF7-217ENST00000537162 LRCH3Q96II8 777 aa13.25□□□□□ -0.29
CPSF7-217ENST00000537162 TCERG1O14776 1098 aaKnown RBP13.24□□□□□ -0.29
CPSF7-217ENST00000537162 FKTNO75072 461 aa13.24□□□□□ -0.29
CPSF7-217ENST00000537162 NOM1Q5C9Z4 860 aaKnown RBP13.24□□□□□ -0.29
CPSF7-217ENST00000537162 SAMD7Q7Z3H4 446 aa13.24□□□□□ -0.29
CPSF7-217ENST00000537162 REM2Q8IYK8 340 aaPredicted RBP13.24□□□□□ -0.29
CPSF7-217ENST00000537162 SIN3AQ96ST3 1273 aa13.24□□□□□ -0.29
CPSF7-217ENST00000537162 PRO3102Q9H379 93 aa13.24□□□□□ -0.29
CPSF7-217ENST00000537162 CNOT7Q9UIV1 285 aaKnown RBP13.24□□□□□ -0.29
CPSF7-217ENST00000537162 RAD17O75943 681 aa13.23□□□□□ -0.29
CPSF7-217ENST00000537162 STARD3NLO95772 234 aa13.23□□□□□ -0.29
CPSF7-217ENST00000537162 A1BGP04217 495 aa13.23□□□□□ -0.29
CPSF7-217ENST00000537162 OTOP1Q7RTM1 612 aa13.23□□□□□ -0.29
CPSF7-217ENST00000537162 BCL2L13Q9BXK5 485 aa13.23□□□□□ -0.29
CPSF7-217ENST00000537162 ZNRF3Q9ULT6 936 aa13.23□□□□□ -0.29
CPSF7-217ENST00000537162 TRIM17Q9Y577 477 aa13.23□□□□□ -0.29
CPSF7-217ENST00000537162 IL6STP40189 918 aaPredicted RBP13.22□□□□□ -0.29
CPSF7-217ENST00000537162 MICALL2Q8IY33 904 aa13.22□□□□□ -0.29
CPSF7-217ENST00000537162 MPNDQ8N594 471 aa13.22□□□□□ -0.29
CPSF7-217ENST00000537162 LAMB4A4D0S4 1761 aa13.22□□□□□ -0.29
CPSF7-217ENST00000537162 CDHR2Q9BYE9 1310 aa13.21□□□□□ -0.29
CPSF7-217ENST00000537162 RNMTO43148 476 aaKnown RBP13.21□□□□□ -0.29
CPSF7-217ENST00000537162 PIP4K2AP48426 406 aaPredicted RBP13.21□□□□□ -0.29
CPSF7-217ENST00000537162 TBC1D10BQ4KMP7 808 aaPredicted RBP13.21□□□□□ -0.29
CPSF7-217ENST00000537162 CC2D2BQ6DHV5 1058 aa13.21□□□□□ -0.29
CPSF7-217ENST00000537162 MOB2Q70IA6 237 aa13.21□□□□□ -0.29
CPSF7-217ENST00000537162 DZIP3Q86Y13 1208 aaKnown RBP13.21□□□□□ -0.29
CPSF7-217ENST00000537162 PRDM6Q9NQX0 595 aa13.21□□□□□ -0.29
CPSF7-217ENST00000537162 SPTBN5Q9NRC6 3674 aaKnown RBP13.21□□□□□ -0.3
CPSF7-217ENST00000537162 ABCC12Q96J65 1359 aa13.2□□□□□ -0.3
CPSF7-217ENST00000537162 ASTN2O75129 1339 aaPredicted RBP13.2□□□□□ -0.3
CPSF7-217ENST00000537162 CRY2Q49AN0 593 aa13.2□□□□□ -0.3
CPSF7-217ENST00000537162 ARMC5Q96C12 935 aa13.2□□□□□ -0.3
CPSF7-217ENST00000537162 ZBTB12Q9Y330 459 aaPredicted RBP13.2□□□□□ -0.3
CPSF7-217ENST00000537162 LAMA3Q16787 3333 aa13.19□□□□□ -0.3
CPSF7-217ENST00000537162 TNNT2P45379 298 aaPredicted RBP13.19□□□□□ -0.3
CPSF7-217ENST00000537162 TM4SF4P48230 202 aa13.19□□□□□ -0.3
CPSF7-217ENST00000537162 MKRN3Q13064 507 aaKnown RBP13.19□□□□□ -0.3
CPSF7-217ENST00000537162 TPTE2Q6XPS3 522 aa13.19□□□□□ -0.3
CPSF7-217ENST00000537162 CDCA5Q96FF9 252 aa13.19□□□□□ -0.3
CPSF7-217ENST00000537162 ZNF496Q96IT1 587 aaPredicted RBP13.19□□□□□ -0.3
CPSF7-217ENST00000537162 RAPGEFL1Q9UHV5 662 aa13.19□□□□□ -0.3
CPSF7-217ENST00000537162 VCANP13611 3396 aa13.18□□□□□ -0.3
CPSF7-217ENST00000537162 YDJCA8MPS7 323 aa13.18□□□□□ -0.3
CPSF7-217ENST00000537162 H7C1D1 291 aa13.18□□□□□ -0.3
CPSF7-217ENST00000537162 CAP1Q01518 475 aa13.18□□□□□ -0.3
CPSF7-217ENST00000537162 PTPN22Q9Y2R2 807 aa13.18□□□□□ -0.3
CPSF7-217ENST00000537162 RBM26Q5T8P6 1007 aaKnown RBP13.17□□□□□ -0.3
CPSF7-217ENST00000537162 DCPSQ96C86 337 aaKnown RBP13.17□□□□□ -0.3
CPSF7-217ENST00000537162 NIP7Q9Y221 180 aaKnown RBP eCLIP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms