RNA–Protein interactions for RNA: ENST00000537068.5

SNHG1-204, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 629 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-204ENST00000537068 TBC1D2BQ9UPU7 963 aa7.06□□□□□ -1.28
SNHG1-204ENST00000537068 LAMB4A4D0S4 1761 aa7.05□□□□□ -1.28
SNHG1-204ENST00000537068 ADAMTSL1Q8N6G6 1762 aa7.05□□□□□ -1.28
SNHG1-204ENST00000537068 C21orf2O43822 256 aa7.05□□□□□ -1.28
SNHG1-204ENST00000537068 STYK1Q6J9G0 422 aa7.05□□□□□ -1.28
SNHG1-204ENST00000537068 BICDL1Q6ZP65 573 aa7.05□□□□□ -1.28
SNHG1-204ENST00000537068 SETDB2Q96T68 719 aa7.05□□□□□ -1.28
SNHG1-204ENST00000537068 KDM3BQ7LBC6 1761 aa7.05□□□□□ -1.28
SNHG1-204ENST00000537068 BTBD11A6QL63 1104 aa7.04□□□□□ -1.28
SNHG1-204ENST00000537068 U2SURPO15042 1029 aaKnown RBP7.04□□□□□ -1.28
SNHG1-204ENST00000537068 HTATSF1O43719 755 aaKnown RBP7.04□□□□□ -1.28
SNHG1-204ENST00000537068 PPP1R37O75864 691 aa7.04□□□□□ -1.28
SNHG1-204ENST00000537068 PRKAR2BP31323 418 aa7.04□□□□□ -1.28
SNHG1-204ENST00000537068 ERFEQ4G0M1 354 aa7.04□□□□□ -1.28
SNHG1-204ENST00000537068 DZIP3Q86Y13 1208 aaKnown RBP7.04□□□□□ -1.28
SNHG1-204ENST00000537068 CNKSR1Q969H4 720 aa7.04□□□□□ -1.28
SNHG1-204ENST00000537068 MASTLQ96GX5 879 aa7.04□□□□□ -1.28
SNHG1-204ENST00000537068 PCNTO95613 3336 aa7.03□□□□□ -1.28
SNHG1-204ENST00000537068 PRAMEF22A3QJZ6 481 aa7.03□□□□□ -1.28
SNHG1-204ENST00000537068 NBPF26B4DH59 902 aa7.03□□□□□ -1.28
SNHG1-204ENST00000537068 SNRPA1P09661 255 aaKnown RBP7.03□□□□□ -1.28
SNHG1-204ENST00000537068 SOGA3Q5TF21 947 aa7.03□□□□□ -1.28
SNHG1-204ENST00000537068 ASTLQ6HA08 431 aaPredicted RBP7.03□□□□□ -1.28
SNHG1-204ENST00000537068 PRPF40BQ6NWY9 871 aaKnown RBP7.03□□□□□ -1.28
SNHG1-204ENST00000537068 NBPF10Q6P3W6 841 aaKnown RBP7.03□□□□□ -1.28
SNHG1-204ENST00000537068 CCDC24Q8N4L8 307 aa7.03□□□□□ -1.28
SNHG1-204ENST00000537068 NBPF15Q8N660 670 aa7.03□□□□□ -1.28
SNHG1-204ENST00000537068 CNBD1Q8NA66 436 aa7.03□□□□□ -1.28
SNHG1-204ENST00000537068 ZNF622Q969S3 477 aaKnown RBP eCLIP7.03□□□□□ -1.28
SNHG1-204ENST00000537068 L3MBTL3Q96JM7 780 aaPredicted RBP7.03□□□□□ -1.28
SNHG1-204ENST00000537068 TAOK3Q9H2K8 898 aa7.03□□□□□ -1.28
SNHG1-204ENST00000537068 PASKQ96RG2 1323 aa7.02□□□□□ -1.28
SNHG1-204ENST00000537068 SNED1Q8TER0 1413 aa7.02□□□□□ -1.29
SNHG1-204ENST00000537068 DDNO94850 711 aaPredicted RBP7.02□□□□□ -1.29
SNHG1-204ENST00000537068 ST5P78524 1137 aa7.02□□□□□ -1.29
SNHG1-204ENST00000537068 FBXO22Q8NEZ5 403 aa7.02□□□□□ -1.29
SNHG1-204ENST00000537068 POTEB2H3BUK9 544 aa7.01□□□□□ -1.29
SNHG1-204ENST00000537068 ITGBL1O95965 494 aaPredicted RBP7.01□□□□□ -1.29
SNHG1-204ENST00000537068 POTEJP0CG39 1038 aa7.01□□□□□ -1.29
SNHG1-204ENST00000537068 NPR1P16066 1061 aa7.01□□□□□ -1.29
SNHG1-204ENST00000537068 PPP2R1AP30153 589 aa7.01□□□□□ -1.29
SNHG1-204ENST00000537068 PIP4K2AP48426 406 aaPredicted RBP7.01□□□□□ -1.29
SNHG1-204ENST00000537068 TAF7Q15545 349 aaPredicted RBP7.01□□□□□ -1.29
SNHG1-204ENST00000537068 TPTE2Q6XPS3 522 aa7.01□□□□□ -1.29
SNHG1-204ENST00000537068 MCM10Q7L590 875 aa7.01□□□□□ -1.29
SNHG1-204ENST00000537068 NPM2Q86SE8 214 aaKnown RBP7.01□□□□□ -1.29
SNHG1-204ENST00000537068 KCNV2Q8TDN2 545 aa7.01□□□□□ -1.29
SNHG1-204ENST00000537068 CFAP53Q96M91 514 aa7.01□□□□□ -1.29
SNHG1-204ENST00000537068 WDR70Q9NW82 654 aa7.01□□□□□ -1.29
SNHG1-204ENST00000537068 NUDCQ9Y266 331 aa7.01□□□□□ -1.29
SNHG1-204ENST00000537068 RIC1Q4ADV7 1423 aa7.01□□□□□ -1.29
SNHG1-204ENST00000537068 IQCA1LA6NCM1 817 aa7□□□□□ -1.29
SNHG1-204ENST00000537068 ERVV-1B6SEH8 477 aa7□□□□□ -1.29
SNHG1-204ENST00000537068 FZD9O00144 591 aa7□□□□□ -1.29
SNHG1-204ENST00000537068 HSPA1AP0DMV8 641 aaKnown RBP7□□□□□ -1.29
SNHG1-204ENST00000537068 HSPA1BP0DMV9 641 aaKnown RBP7□□□□□ -1.29
SNHG1-204ENST00000537068 ALDH1B1P30837 517 aa7□□□□□ -1.29
SNHG1-204ENST00000537068 FKBP4Q02790 459 aaKnown RBP eCLIP7□□□□□ -1.29
SNHG1-204ENST00000537068 DCTN1Q14203 1278 aa7□□□□□ -1.29
SNHG1-204ENST00000537068 HLFQ16534 295 aa7□□□□□ -1.29
SNHG1-204ENST00000537068 CRY2Q49AN0 593 aa7□□□□□ -1.29
SNHG1-204ENST00000537068 CCDC93Q567U6 631 aa7□□□□□ -1.29
SNHG1-204ENST00000537068 NBPF5PQ86XG9 351 aaPredicted RBP7□□□□□ -1.29
SNHG1-204ENST00000537068 OTUD5Q96G74 571 aa7□□□□□ -1.29
SNHG1-204ENST00000537068 MS4A3Q96HJ5 214 aa7□□□□□ -1.29
SNHG1-204ENST00000537068 TAF1DQ9H5J8 278 aaPredicted RBP7□□□□□ -1.29
SNHG1-204ENST00000537068 ZNF652Q9Y2D9 606 aa7□□□□□ -1.29
SNHG1-204ENST00000537068 ZNF330Q9Y3S2 320 aaPredicted RBP7□□□□□ -1.29
SNHG1-204ENST00000537068 ANKRD36CQ5JPF3 1778 aa7□□□□□ -1.29
SNHG1-204ENST00000537068 LTBP1Q14766 1721 aa6.99□□□□□ -1.29
SNHG1-204ENST00000537068 TRPM7Q96QT4 1865 aa6.99□□□□□ -1.29
SNHG1-204ENST00000537068 ATMINO43313 823 aaPredicted RBP6.99□□□□□ -1.29
SNHG1-204ENST00000537068 U2AF1L5P0DN76 240 aaPredicted RBP6.99□□□□□ -1.29
SNHG1-204ENST00000537068 U2AF1Q01081 240 aaKnown RBP eCLIP6.99□□□□□ -1.292e-12■■■□□ 16.4
SNHG1-204ENST00000537068 LDHDQ86WU2 507 aa6.99□□□□□ -1.29
SNHG1-204ENST00000537068 RTKN2Q8IZC4 609 aa6.99□□□□□ -1.29
SNHG1-204ENST00000537068 TNS4Q8IZW8 715 aa6.99□□□□□ -1.29
SNHG1-204ENST00000537068 RTF1Q92541 710 aaKnown RBP6.99□□□□□ -1.29
SNHG1-204ENST00000537068 PLEKHF1Q96S99 279 aa6.99□□□□□ -1.29
SNHG1-204ENST00000537068 PSMD1Q99460 953 aa6.99□□□□□ -1.29
SNHG1-204ENST00000537068 TRPC6Q9Y210 931 aa6.99□□□□□ -1.29
SNHG1-204ENST00000537068 NIP7Q9Y221 180 aaKnown RBP eCLIP6.99□□□□□ -1.294e-44■■■■■ 26.8
SNHG1-204ENST00000537068 LAMB2P55268 1798 aa6.99□□□□□ -1.29
SNHG1-204ENST00000537068 CNTNAP1P78357 1384 aa6.98□□□□□ -1.29
SNHG1-204ENST00000537068 IBTKQ9P2D0 1353 aaPredicted RBP6.98□□□□□ -1.29
SNHG1-204ENST00000537068 COL4A5P29400 1685 aa6.98□□□□□ -1.29
SNHG1-204ENST00000537068 C7P10643 843 aa6.98□□□□□ -1.29
SNHG1-204ENST00000537068 HOXA10P31260 410 aaPredicted RBP6.98□□□□□ -1.29
SNHG1-204ENST00000537068 EIF4A1P60842 406 aaKnown RBP6.98□□□□□ -1.29
SNHG1-204ENST00000537068 OLFM4Q6UX06 510 aa6.98□□□□□ -1.29
SNHG1-204ENST00000537068 ZNF34Q8IZ26 560 aa6.98□□□□□ -1.29
SNHG1-204ENST00000537068 PNISRQ8TF01 805 aaKnown RBP6.98□□□□□ -1.29
SNHG1-204ENST00000537068 ZNF541Q9H0D2 1346 aa6.98□□□□□ -1.29
SNHG1-204ENST00000537068 NPHP1O15259 732 aa6.97□□□□□ -1.29
SNHG1-204ENST00000537068 IARSP41252 1262 aaKnown RBP6.97□□□□□ -1.29
SNHG1-204ENST00000537068 GRIPAP1Q4V328 841 aa6.97□□□□□ -1.29
SNHG1-204ENST00000537068 CC2D2BQ6DHV5 1058 aa6.97□□□□□ -1.29
SNHG1-204ENST00000537068 LRP10Q7Z4F1 713 aa6.97□□□□□ -1.29
SNHG1-204ENST00000537068 PNMA8AQ86V59 439 aaPredicted RBP6.97□□□□□ -1.29
SNHG1-204ENST00000537068 GPC2Q8N158 579 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms