RNA–Protein interactions for RNA: ENST00000537062.1

NPIPA1-205, Transcript of nuclear pore complex interacting protein family member A1, human

TSL 2

Gene NPIPA1, Length 568 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPA1-205	ENST00000537062	CHAMP1	Q96JM3	812 aa		11.16	□□□□□ -0.62
NPIPA1-205	ENST00000537062	GDPD2	Q9HCC8	539 aa		11.16	□□□□□ -0.62
NPIPA1-205	ENST00000537062	DDX19A	Q9NUU7	478 aa	Known RBP	11.16	□□□□□ -0.62
NPIPA1-205	ENST00000537062	UTY	O14607	1347 aa		11.15	□□□□□ -0.62
NPIPA1-205	ENST00000537062	FIBP	O43427	364 aa		11.15	□□□□□ -0.62
NPIPA1-205	ENST00000537062	MAP4K4	O95819	1239 aa	Predicted RBP	11.15	□□□□□ -0.62
NPIPA1-205	ENST00000537062	NBPF7	P0C2Y1	421 aa	Predicted RBP	11.15	□□□□□ -0.62
NPIPA1-205	ENST00000537062	TSGA10IP	Q3SY00	556 aa		11.15	□□□□□ -0.62
NPIPA1-205	ENST00000537062	CREB3L3	Q68CJ9	461 aa		11.15	□□□□□ -0.62
NPIPA1-205	ENST00000537062	PRPF40B	Q6NWY9	871 aa	Known RBP	11.15	□□□□□ -0.62
NPIPA1-205	ENST00000537062	BLOC1S2	Q6QNY1	142 aa		11.15	□□□□□ -0.62
NPIPA1-205	ENST00000537062	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	11.15	□□□□□ -0.62
NPIPA1-205	ENST00000537062	CCDC83	Q8IWF9	413 aa		11.15	□□□□□ -0.62
NPIPA1-205	ENST00000537062	LINS1	Q8NG48	757 aa		11.15	□□□□□ -0.62
NPIPA1-205	ENST00000537062	FAM200A	Q8TCP9	573 aa		11.15	□□□□□ -0.62
NPIPA1-205	ENST00000537062	PKNOX2	Q96KN3	472 aa		11.15	□□□□□ -0.62
NPIPA1-205	ENST00000537062	CCDC94	Q9BW85	323 aa	Predicted RBP	11.15	□□□□□ -0.62
NPIPA1-205	ENST00000537062	CHPF2	Q9P2E5	772 aa		11.15	□□□□□ -0.62
NPIPA1-205	ENST00000537062	SPG7	Q9UQ90	795 aa		11.15	□□□□□ -0.62
NPIPA1-205	ENST00000537062	KIF3A	Q9Y496	699 aa		11.15	□□□□□ -0.62
NPIPA1-205	ENST00000537062	PHRF1	Q9P1Y6	1649 aa	Known RBP	11.15	□□□□□ -0.62
NPIPA1-205	ENST00000537062	KIF13A	Q9H1H9	1805 aa		11.14	□□□□□ -0.63
NPIPA1-205	ENST00000537062	GIGYF1	O75420	1035 aa	Predicted RBP	11.14	□□□□□ -0.63
NPIPA1-205	ENST00000537062	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	11.14	□□□□□ -0.63
NPIPA1-205	ENST00000537062	C1orf141	Q5JVX7	400 aa		11.14	□□□□□ -0.63
NPIPA1-205	ENST00000537062	FOXD4L3	Q6VB84	417 aa	Predicted RBP	11.14	□□□□□ -0.63
NPIPA1-205	ENST00000537062	LTV1	Q96GA3	475 aa	Predicted RBP	11.14	□□□□□ -0.63
NPIPA1-205	ENST00000537062	NUP62CL	Q9H1M0	184 aa		11.14	□□□□□ -0.63
NPIPA1-205	ENST00000537062	RBM8A	Q9Y5S9	174 aa	Known RBP	11.14	□□□□□ -0.63
NPIPA1-205	ENST00000537062	VPS37C	A5D8V6	355 aa	Predicted RBP	11.13	□□□□□ -0.63
NPIPA1-205	ENST00000537062	DNM1	Q05193	864 aa	Known RBP	11.13	□□□□□ -0.63
NPIPA1-205	ENST00000537062	SYCP1	Q15431	976 aa		11.13	□□□□□ -0.63
NPIPA1-205	ENST00000537062	ATL3	Q6DD88	541 aa		11.13	□□□□□ -0.63
NPIPA1-205	ENST00000537062	AACS	Q86V21	672 aa		11.13	□□□□□ -0.63
NPIPA1-205	ENST00000537062	KIAA1524	Q8TCG1	905 aa		11.13	□□□□□ -0.63
NPIPA1-205	ENST00000537062	IL25	Q9H293	177 aa		11.13	□□□□□ -0.63
NPIPA1-205	ENST00000537062	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	11.13	□□□□□ -0.63
NPIPA1-205	ENST00000537062	CFAP45	Q9UL16	551 aa		11.13	□□□□□ -0.63
NPIPA1-205	ENST00000537062	PHF8	Q9UPP1	1060 aa		11.13	□□□□□ -0.63
NPIPA1-205	ENST00000537062	RFX7	Q2KHR2	1363 aa		11.13	□□□□□ -0.63
NPIPA1-205	ENST00000537062	LMTK3	Q96Q04	1460 aa		11.12	□□□□□ -0.63
NPIPA1-205	ENST00000537062	NPHP3	Q7Z494	1330 aa		11.12	□□□□□ -0.63
NPIPA1-205	ENST00000537062	GRM8	O00222	908 aa		11.12	□□□□□ -0.63
NPIPA1-205	ENST00000537062	SLC27A2	O14975	620 aa		11.12	□□□□□ -0.63
NPIPA1-205	ENST00000537062	CTAGE5	O15320	804 aa		11.12	□□□□□ -0.63
NPIPA1-205	ENST00000537062	NEMF	O60524	1076 aa		11.12	□□□□□ -0.63
NPIPA1-205	ENST00000537062	RPS6KB1	P23443	525 aa		11.12	□□□□□ -0.63
NPIPA1-205	ENST00000537062	PTH1R	Q03431	593 aa		11.12	□□□□□ -0.63
NPIPA1-205	ENST00000537062	DHX8	Q14562	1220 aa	Known RBP	11.12	□□□□□ -0.63
NPIPA1-205	ENST00000537062	ZNF530	Q6P9A1	599 aa	Predicted RBP	11.12	□□□□□ -0.63
NPIPA1-205	ENST00000537062	GIMAP6	Q6P9H5	292 aa		11.12	□□□□□ -0.63
NPIPA1-205	ENST00000537062	LARP1	Q6PKG0	1096 aa	Known RBP	11.12	□□□□□ -0.63
NPIPA1-205	ENST00000537062	TNMD	Q9H2S6	317 aa		11.12	□□□□□ -0.63
NPIPA1-205	ENST00000537062	MAP3K2	Q9Y2U5	619 aa		11.12	□□□□□ -0.63
NPIPA1-205	ENST00000537062	ADCY9	O60503	1353 aa		11.12	□□□□□ -0.63
NPIPA1-205	ENST00000537062	RNMT	O43148	476 aa	Known RBP	11.11	□□□□□ -0.63
NPIPA1-205	ENST00000537062	HMGB1	P09429	215 aa	Known RBP	11.11	□□□□□ -0.63
NPIPA1-205	ENST00000537062	NEXN	Q0ZGT2	675 aa		11.11	□□□□□ -0.63
NPIPA1-205	ENST00000537062	ME3	Q16798	604 aa		11.11	□□□□□ -0.63
NPIPA1-205	ENST00000537062	SPATA32	Q96LK8	384 aa		11.11	□□□□□ -0.63
NPIPA1-205	ENST00000537062	LLPH	Q9BRT6	129 aa	Known RBP	11.11	□□□□□ -0.63
NPIPA1-205	ENST00000537062	TTC12	Q9H892	705 aa	Predicted RBP	11.11	□□□□□ -0.63
NPIPA1-205	ENST00000537062	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.11	□□□□□ -0.63
NPIPA1-205	ENST00000537062	HEG1	Q9ULI3	1381 aa		11.11	□□□□□ -0.63
NPIPA1-205	ENST00000537062	CDC25B	P30305	580 aa		11.1	□□□□□ -0.63
NPIPA1-205	ENST00000537062	PLCB2	Q00722	1185 aa		11.1	□□□□□ -0.63
NPIPA1-205	ENST00000537062	TYRO3	Q06418	890 aa		11.1	□□□□□ -0.63
NPIPA1-205	ENST00000537062	NMI	Q13287	307 aa	Predicted RBP	11.1	□□□□□ -0.63
NPIPA1-205	ENST00000537062	RBM43	Q6ZSC3	357 aa	Known RBP	11.1	□□□□□ -0.63
NPIPA1-205	ENST00000537062	PDCL2	Q8N4E4	241 aa		11.1	□□□□□ -0.63
NPIPA1-205	ENST00000537062	FSD1	Q9BTV5	496 aa		11.1	□□□□□ -0.63
NPIPA1-205	ENST00000537062	CLSTN2	Q9H4D0	955 aa		11.1	□□□□□ -0.63
NPIPA1-205	ENST00000537062	LGR6	Q9HBX8	967 aa		11.1	□□□□□ -0.63
NPIPA1-205	ENST00000537062	PAXBP1	Q9Y5B6	917 aa		11.1	□□□□□ -0.63
NPIPA1-205	ENST00000537062	JCAD	Q9P266	1359 aa		11.09	□□□□□ -0.63
NPIPA1-205	ENST00000537062	ATP5J	P18859	108 aa		11.09	□□□□□ -0.63
NPIPA1-205	ENST00000537062	PSME1	Q06323	249 aa		11.09	□□□□□ -0.63
NPIPA1-205	ENST00000537062	ADCK5	Q3MIX3	580 aa		11.09	□□□□□ -0.63
NPIPA1-205	ENST00000537062	UTP14C	Q5TAP6	766 aa	Known RBP	11.09	□□□□□ -0.63
NPIPA1-205	ENST00000537062	NBPF6	Q5VWK0	638 aa		11.09	□□□□□ -0.63
NPIPA1-205	ENST00000537062	USPL1	Q5W0Q7	1092 aa		11.09	□□□□□ -0.63
NPIPA1-205	ENST00000537062	C14orf37	Q86TY3	774 aa		11.09	□□□□□ -0.63
NPIPA1-205	ENST00000537062	DRC7	Q8IY82	874 aa		11.09	□□□□□ -0.63
NPIPA1-205	ENST00000537062	TDRD7	Q8NHU6	1098 aa	Known RBP	11.09	□□□□□ -0.63
NPIPA1-205	ENST00000537062	NBPF4	Q96M43	638 aa		11.09	□□□□□ -0.63
NPIPA1-205	ENST00000537062	TPCN1	Q9ULQ1	816 aa		11.09	□□□□□ -0.63
NPIPA1-205	ENST00000537062	NFAT5	O94916	1531 aa		11.09	□□□□□ -0.63
NPIPA1-205	ENST00000537062	LARGE1	O95461	756 aa		11.08	□□□□□ -0.64
NPIPA1-205	ENST00000537062	TTC6	Q86TZ1	520 aa		11.08	□□□□□ -0.64
NPIPA1-205	ENST00000537062	ZNF830	Q96NB3	372 aa	Predicted RBP	11.08	□□□□□ -0.64
NPIPA1-205	ENST00000537062	MRVI1	Q9Y6F6	885 aa		11.08	□□□□□ -0.64
NPIPA1-205	ENST00000537062	SIPA1L3	O60292	1781 aa	Predicted RBP	11.08	□□□□□ -0.64
NPIPA1-205	ENST00000537062	COL15A1	P39059	1388 aa		11.07	□□□□□ -0.64
NPIPA1-205	ENST00000537062	PLEKHG2	Q9H7P9	1386 aa		11.07	□□□□□ -0.64
NPIPA1-205	ENST00000537062	MED23	Q9ULK4	1368 aa		11.07	□□□□□ -0.64
NPIPA1-205	ENST00000537062	GOLGA6L19	H0YKK7	550 aa		11.07	□□□□□ -0.64
NPIPA1-205	ENST00000537062		H3BQV1	296 aa		11.07	□□□□□ -0.64
NPIPA1-205	ENST00000537062	SASH1	O94885	1247 aa		11.07	□□□□□ -0.64
NPIPA1-205	ENST00000537062	CPA1	P15085	419 aa		11.07	□□□□□ -0.64
NPIPA1-205	ENST00000537062	ZNF75D	P51815	510 aa		11.07	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms