RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 PHF14O94880 888 aa16.02■□□□□ 0.15
CDK5RAP3-202ENST00000536708 CAMTA2O94983 1202 aa16.02■□□□□ 0.15
CDK5RAP3-202ENST00000536708 GIGYF2Q6Y7W6 1299 aaKnown RBP16.02■□□□□ 0.15
CDK5RAP3-202ENST00000536708 UBE3BQ7Z3V4 1068 aa16.02■□□□□ 0.15
CDK5RAP3-202ENST00000536708 GCC1Q96CN9 775 aa16.02■□□□□ 0.15
CDK5RAP3-202ENST00000536708 PNMA6EA0A0J9YXQ4 647 aa16.01■□□□□ 0.15
CDK5RAP3-202ENST00000536708 ANKRD44Q8N8A2 993 aa16.01■□□□□ 0.15
CDK5RAP3-202ENST00000536708 KAZALD1Q96I82 304 aa16.01■□□□□ 0.15
CDK5RAP3-202ENST00000536708 SUCLG2Q96I99 432 aa16.01■□□□□ 0.15
CDK5RAP3-202ENST00000536708 UBN2Q6ZU65 1347 aa16.01■□□□□ 0.15
CDK5RAP3-202ENST00000536708 TCIRG1Q13488 830 aa16■□□□□ 0.15
CDK5RAP3-202ENST00000536708 ANTXR1Q9H6X2 564 aa16■□□□□ 0.15
CDK5RAP3-202ENST00000536708 UTYO14607 1347 aa16■□□□□ 0.15
CDK5RAP3-202ENST00000536708 COL24A1Q17RW2 1714 aa16■□□□□ 0.15
CDK5RAP3-202ENST00000536708 DDX60Q8IY21 1712 aaKnown RBP16■□□□□ 0.15
CDK5RAP3-202ENST00000536708 A0A087WZG4 1122 aa16■□□□□ 0.15
CDK5RAP3-202ENST00000536708 CHD1LQ86WJ1 897 aa16■□□□□ 0.15
CDK5RAP3-202ENST00000536708 ISCA1Q9BUE6 129 aa16■□□□□ 0.15
CDK5RAP3-202ENST00000536708 SRP68Q9UHB9 627 aaKnown RBP16■□□□□ 0.15
CDK5RAP3-202ENST00000536708 BRPF3Q9ULD4 1205 aa16■□□□□ 0.15
CDK5RAP3-202ENST00000536708 RPS6KA4O75676 772 aa15.99■□□□□ 0.15
CDK5RAP3-202ENST00000536708 RC3H1Q5TC82 1133 aaKnown RBP15.99■□□□□ 0.15
CDK5RAP3-202ENST00000536708 AK7Q96M32 723 aa15.99■□□□□ 0.15
CDK5RAP3-202ENST00000536708 TBC1D2Q9BYX2 928 aa15.99■□□□□ 0.15
CDK5RAP3-202ENST00000536708 CWC25Q9NXE8 425 aaPredicted RBP15.99■□□□□ 0.15
CDK5RAP3-202ENST00000536708 LAMB2P55268 1798 aa15.99■□□□□ 0.15
CDK5RAP3-202ENST00000536708 FRAT2O75474 233 aaPredicted RBP15.98■□□□□ 0.15
CDK5RAP3-202ENST00000536708 EPHA10Q5JZY3 1008 aa15.98■□□□□ 0.15
CDK5RAP3-202ENST00000536708 SLC27A3Q5K4L6 730 aa15.98■□□□□ 0.15
CDK5RAP3-202ENST00000536708 C22orf23Q9BZE7 217 aa15.98■□□□□ 0.15
CDK5RAP3-202ENST00000536708 BICC1Q9H694 974 aaKnown RBP15.98■□□□□ 0.15
CDK5RAP3-202ENST00000536708 CASP7P55210 303 aa15.98■□□□□ 0.15
CDK5RAP3-202ENST00000536708 ZNF827Q17R98 1081 aa15.98■□□□□ 0.15
CDK5RAP3-202ENST00000536708 SYNE4Q8N205 404 aa15.98■□□□□ 0.15
CDK5RAP3-202ENST00000536708 RTCBQ9Y3I0 505 aaKnown RBP15.98■□□□□ 0.15
CDK5RAP3-202ENST00000536708 ERVV-1B6SEH8 477 aa15.97■□□□□ 0.15
CDK5RAP3-202ENST00000536708 PLSCR1O15162 318 aa15.97■□□□□ 0.15
CDK5RAP3-202ENST00000536708 CCDC191Q8NCU4 936 aa15.97■□□□□ 0.15
CDK5RAP3-202ENST00000536708 IBTKQ9P2D0 1353 aaPredicted RBP15.97■□□□□ 0.15
CDK5RAP3-202ENST00000536708 BMP2KLQ5H9B9 411 aa15.96■□□□□ 0.15
CDK5RAP3-202ENST00000536708 PPP1R42Q7Z4L9 355 aa15.96■□□□□ 0.15
CDK5RAP3-202ENST00000536708 NLRP10Q86W26 655 aa15.96■□□□□ 0.15
CDK5RAP3-202ENST00000536708 RPAP2Q8IXW5 612 aaPredicted RBP15.96■□□□□ 0.15
CDK5RAP3-202ENST00000536708 BCL2L12Q9HB09 334 aa15.96■□□□□ 0.15
CDK5RAP3-202ENST00000536708 FAM177BA6PVY3 158 aa15.96■□□□□ 0.15
CDK5RAP3-202ENST00000536708 USPL1Q5W0Q7 1092 aa15.96■□□□□ 0.15
CDK5RAP3-202ENST00000536708 ARHGEF1Q92888 912 aaKnown RBP15.96■□□□□ 0.15
CDK5RAP3-202ENST00000536708 APBB1O00213 710 aa15.95■□□□□ 0.14
CDK5RAP3-202ENST00000536708 EN1Q05925 392 aaPredicted RBP15.95■□□□□ 0.14
CDK5RAP3-202ENST00000536708 ZNF34Q8IZ26 560 aa15.95■□□□□ 0.14
CDK5RAP3-202ENST00000536708 FAM89AQ96GI7 184 aa15.95■□□□□ 0.14
CDK5RAP3-202ENST00000536708 SPEF2Q9C093 1822 aa15.95■□□□□ 0.14
CDK5RAP3-202ENST00000536708 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.95■□□□□ 0.14
CDK5RAP3-202ENST00000536708 SRGAP3O43295 1099 aa15.95■□□□□ 0.14
CDK5RAP3-202ENST00000536708 RBM25P49756 843 aaKnown RBP15.95■□□□□ 0.14
CDK5RAP3-202ENST00000536708 ATP8B2P98198 1209 aa15.95■□□□□ 0.14
CDK5RAP3-202ENST00000536708 EZH2Q15910 746 aaKnown RBP15.95■□□□□ 0.14
CDK5RAP3-202ENST00000536708 LNPKQ9C0E8 428 aa15.95■□□□□ 0.14
CDK5RAP3-202ENST00000536708 EXOC6BQ9Y2D4 811 aa15.95■□□□□ 0.14
CDK5RAP3-202ENST00000536708 H7C1W4 665 aa15.94■□□□□ 0.14
CDK5RAP3-202ENST00000536708 USP42Q9H9J4 1324 aaKnown RBP15.93■□□□□ 0.14
CDK5RAP3-202ENST00000536708 TRIM28Q13263 835 aaKnown RBP15.93■□□□□ 0.14
CDK5RAP3-202ENST00000536708 HSP90AB3PQ58FF7 597 aa15.93■□□□□ 0.14
CDK5RAP3-202ENST00000536708 BICDL1Q6ZP65 573 aa15.93■□□□□ 0.14
CDK5RAP3-202ENST00000536708 DEFB132Q7Z7B7 95 aa15.93■□□□□ 0.14
CDK5RAP3-202ENST00000536708 NARFQ9UHQ1 456 aa15.93■□□□□ 0.14
CDK5RAP3-202ENST00000536708 NIP7Q9Y221 180 aaKnown RBP eCLIP15.93■□□□□ 0.14
CDK5RAP3-202ENST00000536708 MFAP1P55081 439 aaKnown RBP15.93■□□□□ 0.14
CDK5RAP3-202ENST00000536708 TBC1D9BQ66K14 1250 aa15.93■□□□□ 0.14
CDK5RAP3-202ENST00000536708 TAF1P21675 1872 aa15.92■□□□□ 0.14
CDK5RAP3-202ENST00000536708 TNRC6CQ9HCJ0 1690 aaKnown RBP15.92■□□□□ 0.14
CDK5RAP3-202ENST00000536708 MTX1Q13505 466 aa15.92■□□□□ 0.14
CDK5RAP3-202ENST00000536708 POLA2Q14181 598 aa15.92■□□□□ 0.14
CDK5RAP3-202ENST00000536708 SUSD4Q5VX71 490 aa15.92■□□□□ 0.14
CDK5RAP3-202ENST00000536708 KLHDC4Q8TBB5 520 aa15.92■□□□□ 0.14
CDK5RAP3-202ENST00000536708 SSH3Q8TE77 659 aa15.92■□□□□ 0.14
CDK5RAP3-202ENST00000536708 PA2G4Q9UQ80 394 aaKnown RBP15.92■□□□□ 0.14
CDK5RAP3-202ENST00000536708 HMMRO75330 724 aa15.91■□□□□ 0.14
CDK5RAP3-202ENST00000536708 PCCAP05165 728 aaPredicted RBP15.91■□□□□ 0.14
CDK5RAP3-202ENST00000536708 FOXO4P98177 505 aa15.91■□□□□ 0.14
CDK5RAP3-202ENST00000536708 TRAPPC3LQ5T215 181 aa15.91■□□□□ 0.14
CDK5RAP3-202ENST00000536708 ANKRD45Q5TZF3 282 aa15.91■□□□□ 0.14
CDK5RAP3-202ENST00000536708 CAMKK2Q96RR4 588 aa15.91■□□□□ 0.14
CDK5RAP3-202ENST00000536708 DCTPP1Q9H773 170 aa15.91■□□□□ 0.14
CDK5RAP3-202ENST00000536708 TRMT112Q9UI30 125 aaKnown RBP15.91■□□□□ 0.14
CDK5RAP3-202ENST00000536708 SMARCA5O60264 1052 aaPredicted RBP15.91■□□□□ 0.14
CDK5RAP3-202ENST00000536708 ZPR1O75312 459 aa15.91■□□□□ 0.14
CDK5RAP3-202ENST00000536708 RFC4P35249 363 aa15.91■□□□□ 0.14
CDK5RAP3-202ENST00000536708 ZBTB38Q8NAP3 1195 aaPredicted RBP15.91■□□□□ 0.14
CDK5RAP3-202ENST00000536708 AKT1S1Q96B36 256 aa15.91■□□□□ 0.14
CDK5RAP3-202ENST00000536708 ZNF652Q9Y2D9 606 aa15.91■□□□□ 0.14
CDK5RAP3-202ENST00000536708 COL4A1P02462 1669 aa15.91■□□□□ 0.14
CDK5RAP3-202ENST00000536708 NTSR2O95665 410 aa15.9■□□□□ 0.14
CDK5RAP3-202ENST00000536708 NUTM1Q86Y26 1132 aa15.9■□□□□ 0.14
CDK5RAP3-202ENST00000536708 SNX21Q969T3 373 aa15.9■□□□□ 0.14
CDK5RAP3-202ENST00000536708 CCDC85AQ96PX6 553 aaPredicted RBP15.9■□□□□ 0.14
CDK5RAP3-202ENST00000536708 TFCP2L1Q9NZI6 479 aa15.9■□□□□ 0.14
CDK5RAP3-202ENST00000536708 QSER1Q2KHR3 1735 aa15.9■□□□□ 0.14
CDK5RAP3-202ENST00000536708 SSFA2P28290 1259 aa15.89■□□□□ 0.13
CDK5RAP3-202ENST00000536708 RABL6Q3YEC7 729 aaPredicted RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms