RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 PUS3Q9BZE2 481 aaKnown RBP9.96□□□□□ -0.82
ABCA4-207ENST00000536513 FMN2Q9NZ56 1722 aa9.96□□□□□ -0.82
ABCA4-207ENST00000536513 GSPT1P15170 499 aaKnown RBP9.95□□□□□ -0.82
ABCA4-207ENST00000536513 BRPF1P55201 1214 aaPredicted RBP9.95□□□□□ -0.82
ABCA4-207ENST00000536513 KIF1BPQ96EK5 621 aa9.95□□□□□ -0.82
ABCA4-207ENST00000536513 GPATCH3Q96I76 525 aa9.95□□□□□ -0.82
ABCA4-207ENST00000536513 TOMM22Q9NS69 142 aa9.95□□□□□ -0.82
ABCA4-207ENST00000536513 SRP68Q9UHB9 627 aaKnown RBP9.95□□□□□ -0.82
ABCA4-207ENST00000536513 CCNL1Q9UK58 526 aaPredicted RBP9.95□□□□□ -0.82
ABCA4-207ENST00000536513 CAMTA1Q9Y6Y1 1673 aa9.95□□□□□ -0.82
ABCA4-207ENST00000536513 ERVV-2B6SEH9 535 aa9.95□□□□□ -0.82
ABCA4-207ENST00000536513 TAF5LO75529 589 aa9.95□□□□□ -0.82
ABCA4-207ENST00000536513 CHGBP05060 677 aa9.95□□□□□ -0.82
ABCA4-207ENST00000536513 MON2Q7Z3U7 1717 aa9.95□□□□□ -0.82
ABCA4-207ENST00000536513 SEPT12Q8IYM1 358 aa9.95□□□□□ -0.82
ABCA4-207ENST00000536513 MPHOSPH8Q99549 860 aa9.95□□□□□ -0.82
ABCA4-207ENST00000536513 APPP05067 770 aa9.95□□□□□ -0.82
ABCA4-207ENST00000536513 METTL24Q5JXM2 366 aa9.95□□□□□ -0.82
ABCA4-207ENST00000536513 NRKQ7Z2Y5 1582 aa9.94□□□□□ -0.82
ABCA4-207ENST00000536513 KIF24Q5T7B8 1368 aa9.94□□□□□ -0.82
ABCA4-207ENST00000536513 ZPR1O75312 459 aa9.94□□□□□ -0.82
ABCA4-207ENST00000536513 CRKLP46109 303 aaKnown RBP9.94□□□□□ -0.82
ABCA4-207ENST00000536513 LRRC24Q50LG9 513 aa9.94□□□□□ -0.82
ABCA4-207ENST00000536513 MSL1Q68DK7 614 aa9.94□□□□□ -0.82
ABCA4-207ENST00000536513 KDM6AO15550 1401 aaPredicted RBP9.94□□□□□ -0.82
ABCA4-207ENST00000536513 AAMPQ13685 434 aa9.94□□□□□ -0.82
ABCA4-207ENST00000536513 PDIA6Q15084 440 aa9.94□□□□□ -0.82
ABCA4-207ENST00000536513 RRAGDQ9NQL2 400 aaPredicted RBP9.94□□□□□ -0.82
ABCA4-207ENST00000536513 ADCY9O60503 1353 aa9.94□□□□□ -0.82
ABCA4-207ENST00000536513 NEK4P51957 841 aa9.94□□□□□ -0.82
ABCA4-207ENST00000536513 IFIT5Q13325 482 aaKnown RBP9.94□□□□□ -0.82
ABCA4-207ENST00000536513 VPS37DQ86XT2 251 aa9.94□□□□□ -0.82
ABCA4-207ENST00000536513 CEP126Q9P2H0 1117 aa9.94□□□□□ -0.82
ABCA4-207ENST00000536513 KNDC1Q76NI1 1749 aa9.93□□□□□ -0.82
ABCA4-207ENST00000536513 CPA1P15085 419 aa9.93□□□□□ -0.82
ABCA4-207ENST00000536513 TTC22Q5TAA0 569 aa9.93□□□□□ -0.82
ABCA4-207ENST00000536513 PLBD2Q8NHP8 589 aa9.93□□□□□ -0.82
ABCA4-207ENST00000536513 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.93□□□□□ -0.82
ABCA4-207ENST00000536513 GOLIM4O00461 696 aa9.93□□□□□ -0.82
ABCA4-207ENST00000536513 IRS4O14654 1257 aaPredicted RBP9.93□□□□□ -0.82
ABCA4-207ENST00000536513 DBNDD2Q9BQY9 259 aa9.93□□□□□ -0.82
ABCA4-207ENST00000536513 CEMIPQ8WUJ3 1361 aa9.93□□□□□ -0.82
ABCA4-207ENST00000536513 AK7Q96M32 723 aa9.93□□□□□ -0.82
ABCA4-207ENST00000536513 HDAC5Q9UQL6 1122 aa9.93□□□□□ -0.82
ABCA4-207ENST00000536513 ADGRB2O60241 1585 aa9.93□□□□□ -0.82
ABCA4-207ENST00000536513 RFC4P35249 363 aa9.92□□□□□ -0.82
ABCA4-207ENST00000536513 ABCF2Q9UG63 623 aa9.92□□□□□ -0.82
ABCA4-207ENST00000536513 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.92□□□□□ -0.82
ABCA4-207ENST00000536513 HEG1Q9ULI3 1381 aa9.92□□□□□ -0.82
ABCA4-207ENST00000536513 AKAP12Q02952 1782 aa9.92□□□□□ -0.82
ABCA4-207ENST00000536513 IDH1O75874 414 aaKnown RBP9.92□□□□□ -0.82
ABCA4-207ENST00000536513 EAF2Q96CJ1 260 aaPredicted RBP9.92□□□□□ -0.82
ABCA4-207ENST00000536513 SLC4A9Q96Q91 983 aa9.92□□□□□ -0.82
ABCA4-207ENST00000536513 RGPD2P0DJD1 1756 aa9.92□□□□□ -0.82
ABCA4-207ENST00000536513 HSP90AB4PQ58FF6 505 aa9.92□□□□□ -0.82
ABCA4-207ENST00000536513 PI16Q6UXB8 463 aa9.92□□□□□ -0.82
ABCA4-207ENST00000536513 R3HCC1Q9Y3T6 440 aaKnown RBP9.92□□□□□ -0.82
ABCA4-207ENST00000536513 MED1Q15648 1581 aaPredicted RBP9.91□□□□□ -0.82
ABCA4-207ENST00000536513 SPATA31A1Q5TZJ5 1347 aa9.91□□□□□ -0.82
ABCA4-207ENST00000536513 ESPNB1AK53 854 aa9.91□□□□□ -0.82
ABCA4-207ENST00000536513 TRAK2O60296 914 aa9.91□□□□□ -0.82
ABCA4-207ENST00000536513 USPL1Q5W0Q7 1092 aa9.91□□□□□ -0.82
ABCA4-207ENST00000536513 NBPF5PQ86XG9 351 aaPredicted RBP9.91□□□□□ -0.82
ABCA4-207ENST00000536513 CNTROBQ8N137 903 aa9.91□□□□□ -0.82
ABCA4-207ENST00000536513 PANK2Q9BZ23 570 aa9.91□□□□□ -0.82
ABCA4-207ENST00000536513 SEC31BQ9NQW1 1179 aa9.91□□□□□ -0.82
ABCA4-207ENST00000536513 TFCP2L1Q9NZI6 479 aa9.91□□□□□ -0.82
ABCA4-207ENST00000536513 MTMR7Q9Y216 660 aa9.91□□□□□ -0.82
ABCA4-207ENST00000536513 COL5A2P05997 1499 aaPredicted RBP9.91□□□□□ -0.82
ABCA4-207ENST00000536513 DLG5Q8TDM6 1919 aa9.91□□□□□ -0.82
ABCA4-207ENST00000536513 LTN1O94822 1766 aa9.91□□□□□ -0.82
ABCA4-207ENST00000536513 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.91□□□□□ -0.82
ABCA4-207ENST00000536513 ERC2O15083 957 aa9.91□□□□□ -0.82
ABCA4-207ENST00000536513 ALDH1L1O75891 902 aa9.91□□□□□ -0.82
ABCA4-207ENST00000536513 CHAF1AQ13111 956 aaPredicted RBP9.91□□□□□ -0.82
ABCA4-207ENST00000536513 ITPK1Q13572 414 aa9.91□□□□□ -0.82
ABCA4-207ENST00000536513 CCDC129Q6ZRS4 1044 aa9.91□□□□□ -0.82
ABCA4-207ENST00000536513 CCDC87Q9NVE4 849 aa9.91□□□□□ -0.82
ABCA4-207ENST00000536513 STK3Q13188 491 aa9.9□□□□□ -0.82
ABCA4-207ENST00000536513 TTC39AQ5SRH9 613 aa9.9□□□□□ -0.82
ABCA4-207ENST00000536513 GREM2Q9H772 168 aa9.9□□□□□ -0.82
ABCA4-207ENST00000536513 HOXB7P09629 217 aa9.9□□□□□ -0.82
ABCA4-207ENST00000536513 BMP2KLQ5H9B9 411 aa9.9□□□□□ -0.82
ABCA4-207ENST00000536513 GBP4Q96PP9 640 aa9.9□□□□□ -0.82
ABCA4-207ENST00000536513 NFAT5O94916 1531 aa9.9□□□□□ -0.82
ABCA4-207ENST00000536513 STRCP1A6NGW2 1772 aa9.9□□□□□ -0.82
ABCA4-207ENST00000536513 ITGA6P23229 1130 aa9.9□□□□□ -0.83
ABCA4-207ENST00000536513 MRE11P49959 708 aa9.9□□□□□ -0.83
ABCA4-207ENST00000536513 FAM196AQ6ZSG2 479 aa9.9□□□□□ -0.83
ABCA4-207ENST00000536513 RAB11FIP4Q86YS3 637 aa9.9□□□□□ -0.83
ABCA4-207ENST00000536513 REC8O95072 547 aa9.89□□□□□ -0.83
ABCA4-207ENST00000536513 APBA3O96018 575 aa9.89□□□□□ -0.83
ABCA4-207ENST00000536513 MCCP23508 829 aa9.89□□□□□ -0.83
ABCA4-207ENST00000536513 PRPF40BQ6NWY9 871 aaKnown RBP9.89□□□□□ -0.83
ABCA4-207ENST00000536513 GJD4Q96KN9 370 aaPredicted RBP9.89□□□□□ -0.83
ABCA4-207ENST00000536513 FAM227BQ96M60 508 aa9.89□□□□□ -0.83
ABCA4-207ENST00000536513 SEC62Q99442 399 aaKnown RBP9.89□□□□□ -0.83
ABCA4-207ENST00000536513 LRRC2Q9BYS8 371 aa9.89□□□□□ -0.83
ABCA4-207ENST00000536513 TBC1D2Q9BYX2 928 aa9.89□□□□□ -0.83
ABCA4-207ENST00000536513 PRDM10Q9NQV6 1147 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms