RNA–Protein interactions for RNA: ENST00000536287.2

RHBDL3-203, Transcript of rhomboid like 3, humanhuman

TSL 2 BASIC

Gene RHBDL3, Length 4,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3-203ENST00000536287 HS1BP3Q53T59 392 aa13.84□□□□□ -0.19
RHBDL3-203ENST00000536287 TAF3Q5VWG9 929 aa13.84□□□□□ -0.19
RHBDL3-203ENST00000536287 DNAJC25Q9H1X3 360 aa13.84□□□□□ -0.19
RHBDL3-203ENST00000536287 GNG11P61952 73 aa13.83□□□□□ -0.2
RHBDL3-203ENST00000536287 RRAGDQ9NQL2 400 aaPredicted RBP13.83□□□□□ -0.2
RHBDL3-203ENST00000536287 TRMT112Q9UI30 125 aaKnown RBP13.83□□□□□ -0.2
RHBDL3-203ENST00000536287 SSRP1Q08945 709 aaKnown RBP13.83□□□□□ -0.2
RHBDL3-203ENST00000536287 ANKRD13DQ6ZTN6 518 aa13.83□□□□□ -0.2
RHBDL3-203ENST00000536287 TAF4BQ92750 862 aa13.83□□□□□ -0.2
RHBDL3-203ENST00000536287 TMOD3Q9NYL9 352 aa13.83□□□□□ -0.2
RHBDL3-203ENST00000536287 GPTP24298 496 aa13.83□□□□□ -0.2
RHBDL3-203ENST00000536287 CEBPAP49715 358 aaPredicted RBP13.83□□□□□ -0.2
RHBDL3-203ENST00000536287 AK2P54819 239 aa13.83□□□□□ -0.2
RHBDL3-203ENST00000536287 TAX1BP1Q86VP1 789 aa13.83□□□□□ -0.2
RHBDL3-203ENST00000536287 PHF23Q9BUL5 403 aaPredicted RBP13.83□□□□□ -0.2
RHBDL3-203ENST00000536287 ZSWIM4Q9H7M6 989 aa13.83□□□□□ -0.2
RHBDL3-203ENST00000536287 NUP88Q99567 741 aaPredicted RBP13.82□□□□□ -0.2
RHBDL3-203ENST00000536287 TCOF1Q13428 1488 aaKnown RBP13.82□□□□□ -0.2
RHBDL3-203ENST00000536287 NEFHP12036 1026 aa13.82□□□□□ -0.2
RHBDL3-203ENST00000536287 TMEM67Q5HYA8 995 aa13.82□□□□□ -0.2
RHBDL3-203ENST00000536287 INTS4Q96HW7 963 aaKnown RBP13.82□□□□□ -0.2
RHBDL3-203ENST00000536287 PA2G4Q9UQ80 394 aaKnown RBP13.82□□□□□ -0.2
RHBDL3-203ENST00000536287 NPHP3Q7Z494 1330 aa13.82□□□□□ -0.2
RHBDL3-203ENST00000536287 KLF18A0A0U1RQI7 1052 aa13.82□□□□□ -0.2
RHBDL3-203ENST00000536287 GTF2F1P35269 517 aaKnown RBP eCLIP13.82□□□□□ -0.2
RHBDL3-203ENST00000536287 RNF41Q9H4P4 317 aaPredicted RBP13.82□□□□□ -0.2
RHBDL3-203ENST00000536287 SEPT11Q9NVA2 429 aaKnown RBP13.82□□□□□ -0.2
RHBDL3-203ENST00000536287 CHMLP26374 656 aa13.82□□□□□ -0.2
RHBDL3-203ENST00000536287 METAP2P50579 478 aaKnown RBP eCLIP13.82□□□□□ -0.2
RHBDL3-203ENST00000536287 MAP9Q49MG5 647 aa13.82□□□□□ -0.2
RHBDL3-203ENST00000536287 MEX3CQ5U5Q3 659 aaKnown RBP13.82□□□□□ -0.2
RHBDL3-203ENST00000536287 PHAXQ9H814 394 aaKnown RBP13.82□□□□□ -0.2
RHBDL3-203ENST00000536287 MKNK2Q9HBH9 465 aa13.82□□□□□ -0.2
RHBDL3-203ENST00000536287 GRM8O00222 908 aa13.81□□□□□ -0.2
RHBDL3-203ENST00000536287 SYKP43405 635 aa13.81□□□□□ -0.2
RHBDL3-203ENST00000536287 TYRO3Q06418 890 aa13.81□□□□□ -0.2
RHBDL3-203ENST00000536287 NCOA7Q8NI08 942 aa13.81□□□□□ -0.2
RHBDL3-203ENST00000536287 OTUD7AQ8TE49 926 aaPredicted RBP13.81□□□□□ -0.2
RHBDL3-203ENST00000536287 PUS7Q96PZ0 661 aaKnown RBP13.81□□□□□ -0.2
RHBDL3-203ENST00000536287 CALCOCO1Q9P1Z2 691 aa13.81□□□□□ -0.2
RHBDL3-203ENST00000536287 BMS1Q14692 1282 aaKnown RBP13.81□□□□□ -0.2
RHBDL3-203ENST00000536287 HSP90AB3PQ58FF7 597 aa13.81□□□□□ -0.2
RHBDL3-203ENST00000536287 FKBP15Q5T1M5 1219 aa13.81□□□□□ -0.2
RHBDL3-203ENST00000536287 CCDC150Q8NCX0 1101 aa13.81□□□□□ -0.2
RHBDL3-203ENST00000536287 ANKRD18BA2A2Z9 1011 aa13.8□□□□□ -0.2
RHBDL3-203ENST00000536287 MTHFSDQ2M296 383 aaKnown RBP13.8□□□□□ -0.2
RHBDL3-203ENST00000536287 CAVIN4Q5BKX8 364 aa13.8□□□□□ -0.2
RHBDL3-203ENST00000536287 CCDC171Q6TFL3 1326 aa13.8□□□□□ -0.2
RHBDL3-203ENST00000536287 MRPS27Q92552 414 aaKnown RBP13.8□□□□□ -0.2
RHBDL3-203ENST00000536287 CWC25Q9NXE8 425 aaPredicted RBP13.8□□□□□ -0.2
RHBDL3-203ENST00000536287 KIF21AQ7Z4S6 1674 aa13.8□□□□□ -0.2
RHBDL3-203ENST00000536287 SYT1P21579 422 aa13.8□□□□□ -0.2
RHBDL3-203ENST00000536287 DNA2P51530 1060 aa13.8□□□□□ -0.2
RHBDL3-203ENST00000536287 HSP90AA4PQ58FG1 418 aa13.8□□□□□ -0.2
RHBDL3-203ENST00000536287 COPS6Q7L5N1 327 aa13.8□□□□□ -0.2
RHBDL3-203ENST00000536287 CACNA2D4Q7Z3S7 1137 aa13.8□□□□□ -0.2
RHBDL3-203ENST00000536287 UBASH3AP57075 661 aa13.8□□□□□ -0.2
RHBDL3-203ENST00000536287 SLC26A6Q9BXS9 759 aa13.8□□□□□ -0.2
RHBDL3-203ENST00000536287 FBXO3Q9UK99 471 aa13.8□□□□□ -0.2
RHBDL3-203ENST00000536287 GOLGA6L9A6NEM1 432 aa13.8□□□□□ -0.2
RHBDL3-203ENST00000536287 YEATS4O95619 227 aa13.8□□□□□ -0.2
RHBDL3-203ENST00000536287 USP8P40818 1118 aa13.8□□□□□ -0.2
RHBDL3-203ENST00000536287 IFNL2Q8IZJ0 200 aa13.8□□□□□ -0.2
RHBDL3-203ENST00000536287 XAGE3Q8WTP9 111 aa13.8□□□□□ -0.2
RHBDL3-203ENST00000536287 CCDC194A0A1B0GVG4 234 aa13.79□□□□□ -0.2
RHBDL3-203ENST00000536287 ALDH1L1O75891 902 aa13.79□□□□□ -0.2
RHBDL3-203ENST00000536287 NLRP5P59047 1200 aa13.79□□□□□ -0.2
RHBDL3-203ENST00000536287 PIP4K2BP78356 416 aa13.79□□□□□ -0.2
RHBDL3-203ENST00000536287 Q6ZUG5 572 aa13.79□□□□□ -0.2
RHBDL3-203ENST00000536287 CCDC12Q8WUD4 166 aaPredicted RBP13.79□□□□□ -0.2
RHBDL3-203ENST00000536287 RBSNQ9H1K0 784 aa13.79□□□□□ -0.2
RHBDL3-203ENST00000536287 DNAI1Q9UI46 699 aa13.79□□□□□ -0.2
RHBDL3-203ENST00000536287 COL17A1Q9UMD9 1497 aaPredicted RBP13.79□□□□□ -0.2
RHBDL3-203ENST00000536287 SLC5A1P13866 664 aa13.79□□□□□ -0.2
RHBDL3-203ENST00000536287 ZSCAN29Q8IWY8 852 aaPredicted RBP13.79□□□□□ -0.2
RHBDL3-203ENST00000536287 KCNG4Q8TDN1 519 aa13.79□□□□□ -0.2
RHBDL3-203ENST00000536287 ARHGEF12Q9NZN5 1544 aa13.79□□□□□ -0.2
RHBDL3-203ENST00000536287 SNRPA1P09661 255 aaKnown RBP13.79□□□□□ -0.2
RHBDL3-203ENST00000536287 PAFAH1B1P43034 410 aa13.79□□□□□ -0.2
RHBDL3-203ENST00000536287 ENOX2Q16206 610 aaKnown RBP13.79□□□□□ -0.2
RHBDL3-203ENST00000536287 AOPEPQ8N6M6 819 aa13.79□□□□□ -0.2
RHBDL3-203ENST00000536287 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.79□□□□□ -0.2
RHBDL3-203ENST00000536287 V9GYY5 206 aaPredicted RBP13.79□□□□□ -0.2
RHBDL3-203ENST00000536287 SOS1Q07889 1333 aaPredicted RBP13.79□□□□□ -0.2
RHBDL3-203ENST00000536287 PZPP20742 1482 aa13.78□□□□□ -0.2
RHBDL3-203ENST00000536287 KSR2Q6VAB6 950 aa13.78□□□□□ -0.2
RHBDL3-203ENST00000536287 NMIQ13287 307 aaPredicted RBP13.78□□□□□ -0.2
RHBDL3-203ENST00000536287 MCMDC2Q4G0Z9 681 aa13.78□□□□□ -0.2
RHBDL3-203ENST00000536287 LMBR1LQ6UX01 489 aa13.78□□□□□ -0.2
RHBDL3-203ENST00000536287 CATIPQ7Z7H3 387 aa13.78□□□□□ -0.2
RHBDL3-203ENST00000536287 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.78□□□□□ -0.2
RHBDL3-203ENST00000536287 PLCH2O75038 1416 aa13.78□□□□□ -0.2
RHBDL3-203ENST00000536287 CPA1P15085 419 aa13.78□□□□□ -0.2
RHBDL3-203ENST00000536287 LMOD1P29536 600 aaPredicted RBP13.78□□□□□ -0.2
RHBDL3-203ENST00000536287 KRT222Q8N1A0 295 aa13.78□□□□□ -0.2
RHBDL3-203ENST00000536287 PTGS1P23219 599 aa13.78□□□□□ -0.2
RHBDL3-203ENST00000536287 SLC39A6Q13433 755 aa13.78□□□□□ -0.2
RHBDL3-203ENST00000536287 TDRD12Q587J7 1177 aaKnown RBP13.78□□□□□ -0.2
RHBDL3-203ENST00000536287 LINS1Q8NG48 757 aa13.78□□□□□ -0.2
RHBDL3-203ENST00000536287 ANKRD24Q8TF21 1146 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms