RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 TRMT2AQ8IZ69 625 aaKnown RBP17.35■□□□□ 0.37
RPAIN-205ENST00000536255 MASTLQ96GX5 879 aa17.35■□□□□ 0.37
RPAIN-205ENST00000536255 PHAXQ9H814 394 aaKnown RBP17.35■□□□□ 0.37
RPAIN-205ENST00000536255 RIC1Q4ADV7 1423 aa17.35■□□□□ 0.37
RPAIN-205ENST00000536255 ANKRD36CQ5JPF3 1778 aa17.35■□□□□ 0.37
RPAIN-205ENST00000536255 ADCY9O60503 1353 aa17.34■□□□□ 0.37
RPAIN-205ENST00000536255 CT47B1P0C2W7 299 aaPredicted RBP17.34■□□□□ 0.37
RPAIN-205ENST00000536255 ZNF428Q96B54 188 aa17.34■□□□□ 0.37
RPAIN-205ENST00000536255 TNRC6CQ9HCJ0 1690 aaKnown RBP17.33■□□□□ 0.37
RPAIN-205ENST00000536255 RNF123Q5XPI4 1314 aa17.33■□□□□ 0.36
RPAIN-205ENST00000536255 NPR1P16066 1061 aa17.33■□□□□ 0.36
RPAIN-205ENST00000536255 NLRP10Q86W26 655 aa17.33■□□□□ 0.36
RPAIN-205ENST00000536255 CNKSR1Q969H4 720 aa17.33■□□□□ 0.36
RPAIN-205ENST00000536255 UTP14AQ9BVJ6 771 aaKnown RBP17.33■□□□□ 0.36
RPAIN-205ENST00000536255 DDX58O95786 925 aaKnown RBP17.32■□□□□ 0.36
RPAIN-205ENST00000536255 SLC4A2P04920 1241 aa17.32■□□□□ 0.36
RPAIN-205ENST00000536255 CRY2Q49AN0 593 aa17.32■□□□□ 0.36
RPAIN-205ENST00000536255 PRPF40BQ6NWY9 871 aaKnown RBP17.32■□□□□ 0.36
RPAIN-205ENST00000536255 RIC3Q7Z5B4 369 aa17.31■□□□□ 0.36
RPAIN-205ENST00000536255 ARFGEF2Q9Y6D5 1785 aa17.3■□□□□ 0.36
RPAIN-205ENST00000536255 TCERG1O14776 1098 aaKnown RBP17.3■□□□□ 0.36
RPAIN-205ENST00000536255 C21orf2O43822 256 aa17.3■□□□□ 0.36
RPAIN-205ENST00000536255 ISCA1Q9BUE6 129 aa17.3■□□□□ 0.36
RPAIN-205ENST00000536255 TRMT112Q9UI30 125 aaKnown RBP17.3■□□□□ 0.36
RPAIN-205ENST00000536255 ATP5J2-PTCD1G3V325 749 aa17.29■□□□□ 0.36
RPAIN-205ENST00000536255 SLC10A5Q5PT55 438 aa17.29■□□□□ 0.36
RPAIN-205ENST00000536255 ZNF219Q9P2Y4 722 aaPredicted RBP17.29■□□□□ 0.36
RPAIN-205ENST00000536255 SH3TC1Q8TE82 1336 aa17.28■□□□□ 0.36
RPAIN-205ENST00000536255 NFKBIEO00221 500 aa17.28■□□□□ 0.36
RPAIN-205ENST00000536255 ALDH1B1P30837 517 aa17.28■□□□□ 0.36
RPAIN-205ENST00000536255 RASSF7Q02833 373 aa17.28■□□□□ 0.36
RPAIN-205ENST00000536255 TRIM28Q13263 835 aaKnown RBP17.28■□□□□ 0.36
RPAIN-205ENST00000536255 C9orf131Q5VYM1 1079 aa17.28■□□□□ 0.36
RPAIN-205ENST00000536255 C3orf67Q6ZVT6 689 aa17.28■□□□□ 0.36
RPAIN-205ENST00000536255 RPGRQ92834 1020 aaKnown RBP17.28■□□□□ 0.36
RPAIN-205ENST00000536255 SLX4Q8IY92 1834 aa17.28■□□□□ 0.36
RPAIN-205ENST00000536255 HOXA10P31260 410 aaPredicted RBP17.27■□□□□ 0.36
RPAIN-205ENST00000536255 FLIIQ13045 1269 aa17.27■□□□□ 0.36
RPAIN-205ENST00000536255 ALDH1L2Q3SY69 923 aa17.27■□□□□ 0.36
RPAIN-205ENST00000536255 SOGA3Q5TF21 947 aa17.27■□□□□ 0.36
RPAIN-205ENST00000536255 NLRP3Q96P20 1036 aa17.27■□□□□ 0.36
RPAIN-205ENST00000536255 RNF181Q9P0P0 153 aa17.27■□□□□ 0.36
RPAIN-205ENST00000536255 CACNA1FO60840 1977 aa17.26■□□□□ 0.35
RPAIN-205ENST00000536255 KSR2Q6VAB6 950 aa17.26■□□□□ 0.35
RPAIN-205ENST00000536255 G2E3Q7L622 706 aa17.26■□□□□ 0.35
RPAIN-205ENST00000536255 SYNE4Q8N205 404 aa17.26■□□□□ 0.35
RPAIN-205ENST00000536255 C7orf43Q8WVR3 580 aa17.26■□□□□ 0.35
RPAIN-205ENST00000536255 MYD88Q99836 296 aa17.26■□□□□ 0.35
RPAIN-205ENST00000536255 MAP3K2Q9Y2U5 619 aa17.26■□□□□ 0.35
RPAIN-205ENST00000536255 CACNA1SQ13698 1873 aa17.26■□□□□ 0.35
RPAIN-205ENST00000536255 PI4KAP2A4QPH2 592 aa17.25■□□□□ 0.35
RPAIN-205ENST00000536255 HCLS1P14317 486 aaPredicted RBP17.25■□□□□ 0.35
RPAIN-205ENST00000536255 LMNB1P20700 586 aa17.25■□□□□ 0.35
RPAIN-205ENST00000536255 FKBP5Q13451 457 aaPredicted RBP17.25■□□□□ 0.35
RPAIN-205ENST00000536255 PI4KAP1Q8N8J0 262 aa17.25■□□□□ 0.35
RPAIN-205ENST00000536255 RBM17Q96I25 401 aaKnown RBP17.25■□□□□ 0.35
RPAIN-205ENST00000536255 METTL22Q9BUU2 404 aaPredicted RBP17.25■□□□□ 0.35
RPAIN-205ENST00000536255 LTBP3Q9NS15 1303 aa17.24■□□□□ 0.35
RPAIN-205ENST00000536255 PRELPP51888 382 aa17.24■□□□□ 0.35
RPAIN-205ENST00000536255 CCDC93Q567U6 631 aa17.24■□□□□ 0.35
RPAIN-205ENST00000536255 FAM89AQ96GI7 184 aa17.24■□□□□ 0.35
RPAIN-205ENST00000536255 CRAMP1Q96RY5 1269 aa17.24■□□□□ 0.35
RPAIN-205ENST00000536255 NEXNQ0ZGT2 675 aa17.23■□□□□ 0.35
RPAIN-205ENST00000536255 CCDC191Q8NCU4 936 aa17.23■□□□□ 0.35
RPAIN-205ENST00000536255 ZNF526Q8TF50 670 aaPredicted RBP17.23■□□□□ 0.35
RPAIN-205ENST00000536255 SSH1Q8WYL5 1049 aa17.23■□□□□ 0.35
RPAIN-205ENST00000536255 TAOK3Q9H2K8 898 aa17.23■□□□□ 0.35
RPAIN-205ENST00000536255 GPBP1L1Q9HC44 474 aaPredicted RBP17.23■□□□□ 0.35
RPAIN-205ENST00000536255 SMC4Q9NTJ3 1288 aa17.23■□□□□ 0.35
RPAIN-205ENST00000536255 SBF1O95248 1867 aa17.22■□□□□ 0.35
RPAIN-205ENST00000536255 FER1L6Q2WGJ9 1857 aa17.22■□□□□ 0.35
RPAIN-205ENST00000536255 OLFM4Q6UX06 510 aa17.22■□□□□ 0.35
RPAIN-205ENST00000536255 MRPL50Q8N5N7 158 aaKnown RBP17.22■□□□□ 0.35
RPAIN-205ENST00000536255 ZBTB38Q8NAP3 1195 aaPredicted RBP17.22■□□□□ 0.35
RPAIN-205ENST00000536255 CWC25Q9NXE8 425 aaPredicted RBP17.22■□□□□ 0.35
RPAIN-205ENST00000536255 ZC3H4Q9UPT8 1303 aaKnown RBP17.21■□□□□ 0.35
RPAIN-205ENST00000536255 RTL5Q5HYW3 569 aaPredicted RBP17.21■□□□□ 0.35
RPAIN-205ENST00000536255 RTKN2Q8IZC4 609 aa17.21■□□□□ 0.35
RPAIN-205ENST00000536255 DNAAF4Q8WXU2 420 aa17.21■□□□□ 0.35
RPAIN-205ENST00000536255 DDX60Q8IY21 1712 aaKnown RBP17.21■□□□□ 0.35
RPAIN-205ENST00000536255 ABCC4O15439 1325 aa17.21■□□□□ 0.34
RPAIN-205ENST00000536255 PTPRCP08575 1304 aa17.21■□□□□ 0.34
RPAIN-205ENST00000536255 LAMB2P55268 1798 aa17.2■□□□□ 0.34
RPAIN-205ENST00000536255 IRS4O14654 1257 aaPredicted RBP17.2■□□□□ 0.34
RPAIN-205ENST00000536255 PPEF1O14829 653 aaPredicted RBP17.2■□□□□ 0.34
RPAIN-205ENST00000536255 PCCAP05165 728 aaPredicted RBP17.2■□□□□ 0.34
RPAIN-205ENST00000536255 IGKV5-2P06315 115 aa17.2■□□□□ 0.34
RPAIN-205ENST00000536255 RARSP54136 660 aaKnown RBP17.2■□□□□ 0.34
RPAIN-205ENST00000536255 YTHDC1Q96MU7 727 aaKnown RBP17.2■□□□□ 0.34
RPAIN-205ENST00000536255 BCL2L13Q9BXK5 485 aa17.2■□□□□ 0.34
RPAIN-205ENST00000536255 HSP90B1P14625 803 aaKnown RBP17.19■□□□□ 0.34
RPAIN-205ENST00000536255 BRPF1P55201 1214 aaPredicted RBP17.19■□□□□ 0.34
RPAIN-205ENST00000536255 FKBP4Q02790 459 aaKnown RBP eCLIP17.19■□□□□ 0.34
RPAIN-205ENST00000536255 CC2D2BQ6DHV5 1058 aa17.19■□□□□ 0.34
RPAIN-205ENST00000536255 SNED1Q8TER0 1413 aa17.19■□□□□ 0.34
RPAIN-205ENST00000536255 NEURL1BA8MQ27 555 aa17.18■□□□□ 0.34
RPAIN-205ENST00000536255 SF3B3Q15393 1217 aaKnown RBP17.18■□□□□ 0.34
RPAIN-205ENST00000536255 CWF19L2Q2TBE0 894 aaKnown RBP17.18■□□□□ 0.34
RPAIN-205ENST00000536255 DDX46Q7L014 1031 aaKnown RBP17.18■□□□□ 0.34
RPAIN-205ENST00000536255 TIAM2Q8IVF5 1701 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms