RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 METTL22Q9BUU2 404 aaPredicted RBP14.5□□□□□ -0.09
TNFRSF1A-208ENST00000536194 NYXQ9GZU5 481 aa14.5□□□□□ -0.09
TNFRSF1A-208ENST00000536194 RIC1Q4ADV7 1423 aa14.49□□□□□ -0.09
TNFRSF1A-208ENST00000536194 PPP1R42Q7Z4L9 355 aa14.49□□□□□ -0.09
TNFRSF1A-208ENST00000536194 PELP1Q8IZL8 1130 aaKnown RBP14.49□□□□□ -0.09
TNFRSF1A-208ENST00000536194 MRPL50Q8N5N7 158 aaKnown RBP14.49□□□□□ -0.09
TNFRSF1A-208ENST00000536194 UTP14AQ9BVJ6 771 aaKnown RBP14.49□□□□□ -0.09
TNFRSF1A-208ENST00000536194 BCL2L13Q9BXK5 485 aa14.49□□□□□ -0.09
TNFRSF1A-208ENST00000536194 SLX4Q8IY92 1834 aa14.49□□□□□ -0.09
TNFRSF1A-208ENST00000536194 KLRG2A4D1S0 409 aaPredicted RBP14.48□□□□□ -0.09
TNFRSF1A-208ENST00000536194 IGKV5-2P06315 115 aa14.48□□□□□ -0.09
TNFRSF1A-208ENST00000536194 PDE6BP35913 854 aa14.48□□□□□ -0.09
TNFRSF1A-208ENST00000536194 TRIM28Q13263 835 aaKnown RBP14.48□□□□□ -0.09
TNFRSF1A-208ENST00000536194 FKBP5Q13451 457 aaPredicted RBP14.48□□□□□ -0.09
TNFRSF1A-208ENST00000536194 GPR162Q16538 588 aa14.48□□□□□ -0.09
TNFRSF1A-208ENST00000536194 C2CD5Q86YS7 1000 aa14.48□□□□□ -0.09
TNFRSF1A-208ENST00000536194 CHD4Q14839 1912 aa14.47□□□□□ -0.09
TNFRSF1A-208ENST00000536194 F6X3S4 739 aa14.47□□□□□ -0.09
TNFRSF1A-208ENST00000536194 CT47B1P0C2W7 299 aaPredicted RBP14.47□□□□□ -0.09
TNFRSF1A-208ENST00000536194 SRGNP10124 158 aa14.47□□□□□ -0.09
TNFRSF1A-208ENST00000536194 CWF19L2Q2TBE0 894 aaKnown RBP14.47□□□□□ -0.09
TNFRSF1A-208ENST00000536194 C3orf67Q6ZVT6 689 aa14.47□□□□□ -0.09
TNFRSF1A-208ENST00000536194 TRMT112Q9UI30 125 aaKnown RBP14.47□□□□□ -0.09
TNFRSF1A-208ENST00000536194 GOLGB1Q14789 3259 aaKnown RBP14.47□□□□□ -0.09
TNFRSF1A-208ENST00000536194 TAF1P21675 1872 aa14.46□□□□□ -0.09
TNFRSF1A-208ENST00000536194 RNF123Q5XPI4 1314 aa14.46□□□□□ -0.09
TNFRSF1A-208ENST00000536194 H0YIN7 160 aa14.46□□□□□ -0.09
TNFRSF1A-208ENST00000536194 GTF2E1P29083 439 aaPredicted RBP14.46□□□□□ -0.09
TNFRSF1A-208ENST00000536194 ALDH1L2Q3SY69 923 aa14.46□□□□□ -0.09
TNFRSF1A-208ENST00000536194 DNAAF4Q8WXU2 420 aa14.46□□□□□ -0.09
TNFRSF1A-208ENST00000536194 PIM2Q9P1W9 311 aa14.46□□□□□ -0.09
TNFRSF1A-208ENST00000536194 BCS1LQ9Y276 419 aa14.46□□□□□ -0.09
TNFRSF1A-208ENST00000536194 MYH3P11055 1940 aa14.45□□□□□ -0.1
TNFRSF1A-208ENST00000536194 RARSP54136 660 aaKnown RBP14.45□□□□□ -0.1
TNFRSF1A-208ENST00000536194 CRY2Q49AN0 593 aa14.45□□□□□ -0.1
TNFRSF1A-208ENST00000536194 RTL5Q5HYW3 569 aaPredicted RBP14.45□□□□□ -0.1
TNFRSF1A-208ENST00000536194 SLC10A5Q5PT55 438 aa14.45□□□□□ -0.1
TNFRSF1A-208ENST00000536194 CCDC191Q8NCU4 936 aa14.45□□□□□ -0.1
TNFRSF1A-208ENST00000536194 FAM89AQ96GI7 184 aa14.45□□□□□ -0.1
TNFRSF1A-208ENST00000536194 SMC4Q9NTJ3 1288 aa14.45□□□□□ -0.1
TNFRSF1A-208ENST00000536194 COL4A1P02462 1669 aa14.45□□□□□ -0.1
TNFRSF1A-208ENST00000536194 SH3TC1Q8TE82 1336 aa14.44□□□□□ -0.1
TNFRSF1A-208ENST00000536194 NEURL1BA8MQ27 555 aa14.44□□□□□ -0.1
TNFRSF1A-208ENST00000536194 HCLS1P14317 486 aaPredicted RBP14.44□□□□□ -0.1
TNFRSF1A-208ENST00000536194 ZBTB38Q8NAP3 1195 aaPredicted RBP14.44□□□□□ -0.1
TNFRSF1A-208ENST00000536194 JARID2Q92833 1246 aaPredicted RBP14.44□□□□□ -0.1
TNFRSF1A-208ENST00000536194 ZNF622Q969S3 477 aaKnown RBP eCLIP14.44□□□□□ -0.1
TNFRSF1A-208ENST00000536194 CWC25Q9NXE8 425 aaPredicted RBP14.44□□□□□ -0.1
TNFRSF1A-208ENST00000536194 PDZRN3Q9UPQ7 1066 aa14.44□□□□□ -0.1
TNFRSF1A-208ENST00000536194 BRPF1P55201 1214 aaPredicted RBP14.43□□□□□ -0.1
TNFRSF1A-208ENST00000536194 NEXNQ0ZGT2 675 aa14.43□□□□□ -0.1
TNFRSF1A-208ENST00000536194 DALRD3Q5D0E6 543 aaKnown RBP14.43□□□□□ -0.1
TNFRSF1A-208ENST00000536194 BEND3Q5T5X7 828 aa14.43□□□□□ -0.1
TNFRSF1A-208ENST00000536194 STYK1Q6J9G0 422 aa14.43□□□□□ -0.1
TNFRSF1A-208ENST00000536194 TTLL6Q8N841 843 aa14.43□□□□□ -0.1
TNFRSF1A-208ENST00000536194 MASTLQ96GX5 879 aa14.43□□□□□ -0.1
TNFRSF1A-208ENST00000536194 FER1L6Q2WGJ9 1857 aa14.43□□□□□ -0.1
TNFRSF1A-208ENST00000536194 SBF1O95248 1867 aa14.42□□□□□ -0.1
TNFRSF1A-208ENST00000536194 DCAF8L1A6NGE4 600 aa14.42□□□□□ -0.1
TNFRSF1A-208ENST00000536194 PCCAP05165 728 aaPredicted RBP14.42□□□□□ -0.1
TNFRSF1A-208ENST00000536194 NPR1P16066 1061 aa14.42□□□□□ -0.1
TNFRSF1A-208ENST00000536194 LINS1Q8NG48 757 aa14.42□□□□□ -0.1
TNFRSF1A-208ENST00000536194 UTRNP46939 3433 aa14.42□□□□□ -0.1
TNFRSF1A-208ENST00000536194 PTPRCP08575 1304 aa14.41□□□□□ -0.1
TNFRSF1A-208ENST00000536194 IRS4O14654 1257 aaPredicted RBP14.41□□□□□ -0.1
TNFRSF1A-208ENST00000536194 PRPF40BQ6NWY9 871 aaKnown RBP14.41□□□□□ -0.1
TNFRSF1A-208ENST00000536194 CCDC88AQ3V6T2 1871 aa14.41□□□□□ -0.1
TNFRSF1A-208ENST00000536194 H7C1W4 665 aa14.4□□□□□ -0.1
TNFRSF1A-208ENST00000536194 GRIN3BO60391 1043 aa14.4□□□□□ -0.1
TNFRSF1A-208ENST00000536194 BCAR3O75815 825 aa14.4□□□□□ -0.1
TNFRSF1A-208ENST00000536194 HOXA10P31260 410 aaPredicted RBP14.4□□□□□ -0.1
TNFRSF1A-208ENST00000536194 CASP7P55210 303 aa14.4□□□□□ -0.1
TNFRSF1A-208ENST00000536194 GCKRQ14397 625 aa14.4□□□□□ -0.1
TNFRSF1A-208ENST00000536194 SLC51AQ86UW1 340 aa14.4□□□□□ -0.1
TNFRSF1A-208ENST00000536194 CNKSR1Q969H4 720 aa14.4□□□□□ -0.1
TNFRSF1A-208ENST00000536194 NLRP3Q96P20 1036 aa14.4□□□□□ -0.1
TNFRSF1A-208ENST00000536194 NOB1Q9ULX3 412 aaKnown RBP14.4□□□□□ -0.1
TNFRSF1A-208ENST00000536194 CDHR2Q9BYE9 1310 aa14.4□□□□□ -0.1
TNFRSF1A-208ENST00000536194 SLC4A10Q6U841 1118 aa14.39□□□□□ -0.11
TNFRSF1A-208ENST00000536194 UBE3BQ7Z3V4 1068 aa14.39□□□□□ -0.11
TNFRSF1A-208ENST00000536194 C7orf43Q8WVR3 580 aa14.39□□□□□ -0.11
TNFRSF1A-208ENST00000536194 SPEF2Q9C093 1822 aa14.38□□□□□ -0.11
TNFRSF1A-208ENST00000536194 C21orf2O43822 256 aa14.38□□□□□ -0.11
TNFRSF1A-208ENST00000536194 OLFM4Q6UX06 510 aa14.38□□□□□ -0.11
TNFRSF1A-208ENST00000536194 RPGRQ92834 1020 aaKnown RBP14.38□□□□□ -0.11
TNFRSF1A-208ENST00000536194 CRAMP1Q96RY5 1269 aa14.38□□□□□ -0.11
TNFRSF1A-208ENST00000536194 ZNF219Q9P2Y4 722 aaPredicted RBP14.38□□□□□ -0.11
TNFRSF1A-208ENST00000536194 SNED1Q8TER0 1413 aa14.38□□□□□ -0.11
TNFRSF1A-208ENST00000536194 ABCC4O15439 1325 aa14.38□□□□□ -0.11
TNFRSF1A-208ENST00000536194 LRRC37AA6NMS7 1700 aa14.38□□□□□ -0.11
TNFRSF1A-208ENST00000536194 ALDH1L1O75891 902 aa14.37□□□□□ -0.11
TNFRSF1A-208ENST00000536194 ALDH1B1P30837 517 aa14.37□□□□□ -0.11
TNFRSF1A-208ENST00000536194 SF3B3Q15393 1217 aaKnown RBP14.37□□□□□ -0.11
TNFRSF1A-208ENST00000536194 YTHDC1Q96MU7 727 aaKnown RBP14.37□□□□□ -0.11
TNFRSF1A-208ENST00000536194 SRCIN1Q9C0H9 1055 aa14.37□□□□□ -0.11
TNFRSF1A-208ENST00000536194 TNNQ9UQP3 1299 aa14.37□□□□□ -0.11
TNFRSF1A-208ENST00000536194 KIF16BQ96L93 1317 aa14.37□□□□□ -0.11
TNFRSF1A-208ENST00000536194 PDE8AO60658 829 aa14.36□□□□□ -0.11
TNFRSF1A-208ENST00000536194 PRELPP51888 382 aa14.36□□□□□ -0.11
TNFRSF1A-208ENST00000536194 RASSF7Q02833 373 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms