RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 BAG4O95429 457 aaKnown RBP16.19■□□□□ 0.18
VPS33B-202ENST00000535906 EVI5LQ96CN4 794 aa16.19■□□□□ 0.18
VPS33B-202ENST00000535906 COPRSQ9NQ92 184 aa16.19■□□□□ 0.18
VPS33B-202ENST00000535906 PAPPAQ13219 1627 aa16.19■□□□□ 0.18
VPS33B-202ENST00000535906 NOL8Q76FK4 1167 aaKnown RBP16.19■□□□□ 0.18
VPS33B-202ENST00000535906 COL15A1P39059 1388 aa16.19■□□□□ 0.18
VPS33B-202ENST00000535906 KIAA1211Q6ZU35 1233 aa16.18■□□□□ 0.18
VPS33B-202ENST00000535906 PANK2Q9BZ23 570 aa16.18■□□□□ 0.18
VPS33B-202ENST00000535906 GRPEL1Q9HAV7 217 aa16.18■□□□□ 0.18
VPS33B-202ENST00000535906 SNX14Q9Y5W7 946 aa16.18■□□□□ 0.18
VPS33B-202ENST00000535906 RASEFQ8IZ41 740 aa16.18■□□□□ 0.18
VPS33B-202ENST00000535906 ZDHHC9Q9Y397 364 aa16.18■□□□□ 0.18
VPS33B-202ENST00000535906 TNS2Q63HR2 1409 aa16.17■□□□□ 0.18
VPS33B-202ENST00000535906 CUL4AQ13619 759 aa16.17■□□□□ 0.18
VPS33B-202ENST00000535906 RUFY2Q8WXA3 655 aa16.17■□□□□ 0.18
VPS33B-202ENST00000535906 BOLA2Q9H3K6 86 aa16.17■□□□□ 0.18
VPS33B-202ENST00000535906 BTG4Q9NY30 223 aa16.17■□□□□ 0.18
VPS33B-202ENST00000535906 TOGARAM1Q9Y4F4 1720 aa16.17■□□□□ 0.18
VPS33B-202ENST00000535906 PTH1RQ03431 593 aa16.17■□□□□ 0.18
VPS33B-202ENST00000535906 H7C1W4 665 aa16.16■□□□□ 0.18
VPS33B-202ENST00000535906 ZBTB3Q9H5J0 574 aa16.16■□□□□ 0.18
VPS33B-202ENST00000535906 NUP188Q5SRE5 1749 aa16.16■□□□□ 0.18
VPS33B-202ENST00000535906 TFCP2Q12800 502 aa16.16■□□□□ 0.18
VPS33B-202ENST00000535906 LMBR1LQ6UX01 489 aa16.16■□□□□ 0.18
VPS33B-202ENST00000535906 FOXO4P98177 505 aa16.15■□□□□ 0.18
VPS33B-202ENST00000535906 FAM227BQ96M60 508 aa16.15■□□□□ 0.18
VPS33B-202ENST00000535906 TMOD3Q9NYL9 352 aa16.15■□□□□ 0.18
VPS33B-202ENST00000535906 KLHL40Q2TBA0 621 aa16.15■□□□□ 0.18
VPS33B-202ENST00000535906 CWC25Q9NXE8 425 aaPredicted RBP16.15■□□□□ 0.18
VPS33B-202ENST00000535906 DBNLQ9UJU6 430 aaKnown RBP16.15■□□□□ 0.18
VPS33B-202ENST00000535906 TNNI3KQ59H18 835 aa16.14■□□□□ 0.17
VPS33B-202ENST00000535906 FPGT-TNNI3KV9GXZ4 949 aa16.14■□□□□ 0.17
VPS33B-202ENST00000535906 MCTP1Q6DN14 999 aa16.14■□□□□ 0.17
VPS33B-202ENST00000535906 INTS4Q96HW7 963 aaKnown RBP16.14■□□□□ 0.17
VPS33B-202ENST00000535906 ASAP1Q9ULH1 1129 aa16.14■□□□□ 0.17
VPS33B-202ENST00000535906 NMIQ13287 307 aaPredicted RBP16.13■□□□□ 0.17
VPS33B-202ENST00000535906 PIGBQ92521 554 aa16.13■□□□□ 0.17
VPS33B-202ENST00000535906 TTC14Q96N46 770 aa16.13■□□□□ 0.17
VPS33B-202ENST00000535906 GAS2L3Q86XJ1 694 aa16.13■□□□□ 0.17
VPS33B-202ENST00000535906 EDC3Q96F86 508 aaKnown RBP16.13■□□□□ 0.17
VPS33B-202ENST00000535906 CHMP3Q9Y3E7 222 aa16.13■□□□□ 0.17
VPS33B-202ENST00000535906 CCDC191Q8NCU4 936 aa16.12■□□□□ 0.17
VPS33B-202ENST00000535906 FSD1Q9BTV5 496 aa16.12■□□□□ 0.17
VPS33B-202ENST00000535906 DDX49Q9Y6V7 483 aaKnown RBP16.12■□□□□ 0.17
VPS33B-202ENST00000535906 TJP1Q07157 1748 aa16.12■□□□□ 0.17
VPS33B-202ENST00000535906 A0A0D9SFI3 127 aa16.11■□□□□ 0.17
VPS33B-202ENST00000535906 HIP1O00291 1037 aa16.11■□□□□ 0.17
VPS33B-202ENST00000535906 CPA1P15085 419 aa16.11■□□□□ 0.17
VPS33B-202ENST00000535906 PRPF40BQ6NWY9 871 aaKnown RBP16.11■□□□□ 0.17
VPS33B-202ENST00000535906 CCDC171Q6TFL3 1326 aa16.11■□□□□ 0.17
VPS33B-202ENST00000535906 ATP5JP18859 108 aa16.11■□□□□ 0.17
VPS33B-202ENST00000535906 NECTIN1Q15223 517 aa16.11■□□□□ 0.17
VPS33B-202ENST00000535906 ADCK5Q3MIX3 580 aa16.11■□□□□ 0.17
VPS33B-202ENST00000535906 RRAGDQ9NQL2 400 aaPredicted RBP16.11■□□□□ 0.17
VPS33B-202ENST00000535906 CASTP20810 708 aaKnown RBP16.1■□□□□ 0.17
VPS33B-202ENST00000535906 AK2P54819 239 aa16.1■□□□□ 0.17
VPS33B-202ENST00000535906 FOXD4L5Q5VV16 416 aaPredicted RBP16.1■□□□□ 0.17
VPS33B-202ENST00000535906 FOXD4L4Q8WXT5 416 aaPredicted RBP16.1■□□□□ 0.17
VPS33B-202ENST00000535906 CHAMP1Q96JM3 812 aa16.1■□□□□ 0.17
VPS33B-202ENST00000535906 DBNDD2Q9BQY9 259 aa16.1■□□□□ 0.17
VPS33B-202ENST00000535906 LARP6Q9BRS8 491 aaKnown RBP16.1■□□□□ 0.17
VPS33B-202ENST00000535906 ATG9AQ7Z3C6 839 aa16.1■□□□□ 0.17
VPS33B-202ENST00000535906 DNAJC10Q8IXB1 793 aa16.1■□□□□ 0.17
VPS33B-202ENST00000535906 MAP4K1Q92918 833 aa16.1■□□□□ 0.17
VPS33B-202ENST00000535906 KCNB2Q92953 911 aa16.1■□□□□ 0.17
VPS33B-202ENST00000535906 SNRKQ9NRH2 765 aa16.1■□□□□ 0.17
VPS33B-202ENST00000535906 ATG3Q9NT62 314 aa16.1■□□□□ 0.17
VPS33B-202ENST00000535906 LMBRD1Q9NUN5 540 aa16.1■□□□□ 0.17
VPS33B-202ENST00000535906 ZNF330Q9Y3S2 320 aaPredicted RBP16.1■□□□□ 0.17
VPS33B-202ENST00000535906 NDUFB9Q9Y6M9 179 aa16.1■□□□□ 0.17
VPS33B-202ENST00000535906 RUFY3Q7L099 469 aa16.09■□□□□ 0.17
VPS33B-202ENST00000535906 BRD1O95696 1058 aa16.09■□□□□ 0.17
VPS33B-202ENST00000535906 RBM8AQ9Y5S9 174 aaKnown RBP16.09■□□□□ 0.17
VPS33B-202ENST00000535906 ITGB4P16144 1822 aa16.09■□□□□ 0.17
VPS33B-202ENST00000535906 DISP2A7MBM2 1401 aa16.08■□□□□ 0.17
VPS33B-202ENST00000535906 ISCA1Q9BUE6 129 aa16.08■□□□□ 0.17
VPS33B-202ENST00000535906 VSIG10Q8N0Z9 540 aa16.08■□□□□ 0.16
VPS33B-202ENST00000535906 JAKMIP1Q96N16 626 aaKnown RBP16.08■□□□□ 0.16
VPS33B-202ENST00000535906 TCIRG1Q13488 830 aa16.07■□□□□ 0.16
VPS33B-202ENST00000535906 CREB3L3Q68CJ9 461 aa16.07■□□□□ 0.16
VPS33B-202ENST00000535906 ZNF589Q86UQ0 364 aaPredicted RBP16.07■□□□□ 0.16
VPS33B-202ENST00000535906 ZNF594Q96JF6 807 aaPredicted RBP16.07■□□□□ 0.16
VPS33B-202ENST00000535906 ZSWIM6Q9HCJ5 1215 aa16.07■□□□□ 0.16
VPS33B-202ENST00000535906 LIMCH1Q9UPQ0 1083 aa16.07■□□□□ 0.16
VPS33B-202ENST00000535906 ROBO1Q9Y6N7 1651 aa16.07■□□□□ 0.16
VPS33B-202ENST00000535906 KAT6BQ8WYB5 2073 aa16.07■□□□□ 0.16
VPS33B-202ENST00000535906 COL14A1Q05707 1796 aaKnown RBP16.07■□□□□ 0.16
VPS33B-202ENST00000535906 MED23Q9ULK4 1368 aa16.07■□□□□ 0.16
VPS33B-202ENST00000535906 TEX13AQ9BXU3 409 aaPredicted RBP16.07■□□□□ 0.16
VPS33B-202ENST00000535906 PRPF40AO75400 957 aaKnown RBP16.06■□□□□ 0.16
VPS33B-202ENST00000535906 KCNJ4P48050 445 aa16.06■□□□□ 0.16
VPS33B-202ENST00000535906 LRRC24Q50LG9 513 aa16.06■□□□□ 0.16
VPS33B-202ENST00000535906 DNAJC2Q99543 621 aaKnown RBP16.06■□□□□ 0.16
VPS33B-202ENST00000535906 TM6SF1Q9BZW5 370 aa16.06■□□□□ 0.16
VPS33B-202ENST00000535906 CCDC9Q9Y3X0 531 aaKnown RBP16.06■□□□□ 0.16
VPS33B-202ENST00000535906 CHGBP05060 677 aa16.06■□□□□ 0.16
VPS33B-202ENST00000535906 ZKSCAN1P17029 563 aaPredicted RBP16.06■□□□□ 0.16
VPS33B-202ENST00000535906 TIMM10P62072 90 aa16.06■□□□□ 0.16
VPS33B-202ENST00000535906 HAUS7Q99871 368 aa16.06■□□□□ 0.16
VPS33B-202ENST00000535906 SLC27A2O14975 620 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms