RNA–Protein interactions for RNA: ENST00000535707.5

CD4-204, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-204ENST00000535707 ANKRD13DQ6ZTN6 518 aa11.24□□□□□ -0.61
CD4-204ENST00000535707 COPS6Q7L5N1 327 aa11.24□□□□□ -0.61
CD4-204ENST00000535707 DZIP3Q86Y13 1208 aaKnown RBP11.24□□□□□ -0.61
CD4-204ENST00000535707 API5Q9BZZ5 524 aaKnown RBP11.24□□□□□ -0.61
CD4-204ENST00000535707 ANO8Q9HCE9 1232 aaPredicted RBP11.24□□□□□ -0.61
CD4-204ENST00000535707 ZNF652Q9Y2D9 606 aa11.24□□□□□ -0.61
CD4-204ENST00000535707 MAP3K15Q6ZN16 1313 aa11.24□□□□□ -0.61
CD4-204ENST00000535707 USP42Q9H9J4 1324 aaKnown RBP11.24□□□□□ -0.61
CD4-204ENST00000535707 ATP10DQ9P241 1426 aa11.24□□□□□ -0.61
CD4-204ENST00000535707 N4BP2Q86UW6 1770 aaPredicted RBP11.23□□□□□ -0.61
CD4-204ENST00000535707 RFC4P35249 363 aa11.23□□□□□ -0.61
CD4-204ENST00000535707 XAGE3Q8WTP9 111 aa11.23□□□□□ -0.61
CD4-204ENST00000535707 NECTIN2Q92692 538 aa11.23□□□□□ -0.61
CD4-204ENST00000535707 KDM4CQ9H3R0 1056 aa11.23□□□□□ -0.61
CD4-204ENST00000535707 RNF123Q5XPI4 1314 aa11.23□□□□□ -0.61
CD4-204ENST00000535707 PNPLA7Q6ZV29 1317 aa11.23□□□□□ -0.61
CD4-204ENST00000535707 COL24A1Q17RW2 1714 aa11.23□□□□□ -0.61
CD4-204ENST00000535707 CASZ1Q86V15 1759 aa11.23□□□□□ -0.61
CD4-204ENST00000535707 ARFGEF2Q9Y6D5 1785 aa11.23□□□□□ -0.61
CD4-204ENST00000535707 ZPR1O75312 459 aa11.22□□□□□ -0.61
CD4-204ENST00000535707 CAMTA2O94983 1202 aa11.22□□□□□ -0.61
CD4-204ENST00000535707 TRIM28Q13263 835 aaKnown RBP11.22□□□□□ -0.61
CD4-204ENST00000535707 FKBP5Q13451 457 aaPredicted RBP11.22□□□□□ -0.61
CD4-204ENST00000535707 ANKRD36CQ5JPF3 1778 aa11.22□□□□□ -0.61
CD4-204ENST00000535707 ZKSCAN2Q63HK3 967 aa11.22□□□□□ -0.61
CD4-204ENST00000535707 ATF7IPQ6VMQ6 1270 aa11.22□□□□□ -0.61
CD4-204ENST00000535707 GIGYF2Q6Y7W6 1299 aaKnown RBP11.22□□□□□ -0.61
CD4-204ENST00000535707 PHAXQ9H814 394 aaKnown RBP11.22□□□□□ -0.61
CD4-204ENST00000535707 ARIH1Q9Y4X5 557 aaPredicted RBP11.22□□□□□ -0.61
CD4-204ENST00000535707 ADCY9O60503 1353 aa11.21□□□□□ -0.61
CD4-204ENST00000535707 BCAR3O75815 825 aa11.21□□□□□ -0.61
CD4-204ENST00000535707 PDE3AQ14432 1141 aa11.21□□□□□ -0.61
CD4-204ENST00000535707 RBM26Q5T8P6 1007 aaKnown RBP11.21□□□□□ -0.61
CD4-204ENST00000535707 G2E3Q7L622 706 aa11.21□□□□□ -0.61
CD4-204ENST00000535707 COL23A1Q86Y22 540 aaPredicted RBP11.21□□□□□ -0.61
CD4-204ENST00000535707 GPIHBP1Q8IV16 184 aa11.21□□□□□ -0.61
CD4-204ENST00000535707 NLGN1Q8N2Q7 840 aa11.21□□□□□ -0.61
CD4-204ENST00000535707 NOB1Q9ULX3 412 aaKnown RBP11.21□□□□□ -0.61
CD4-204ENST00000535707 ABCC4O15439 1325 aa11.2□□□□□ -0.62
CD4-204ENST00000535707 PI4KAP2A4QPH2 592 aa11.2□□□□□ -0.62
CD4-204ENST00000535707 ANXA1P04083 346 aa11.2□□□□□ -0.62
CD4-204ENST00000535707 PIP4K2AP48426 406 aaPredicted RBP11.2□□□□□ -0.62
CD4-204ENST00000535707 NEXNQ0ZGT2 675 aa11.2□□□□□ -0.62
CD4-204ENST00000535707 TCIRG1Q13488 830 aa11.2□□□□□ -0.62
CD4-204ENST00000535707 MFSD10Q14728 455 aa11.2□□□□□ -0.62
CD4-204ENST00000535707 TTLL7Q6ZT98 887 aa11.2□□□□□ -0.62
CD4-204ENST00000535707 RIC3Q7Z5B4 369 aa11.2□□□□□ -0.62
CD4-204ENST00000535707 AMIGO3Q86WK7 504 aa11.2□□□□□ -0.62
CD4-204ENST00000535707 PI4KAP1Q8N8J0 262 aa11.2□□□□□ -0.62
CD4-204ENST00000535707 LINS1Q8NG48 757 aa11.2□□□□□ -0.62
CD4-204ENST00000535707 DNAAF4Q8WXU2 420 aa11.2□□□□□ -0.62
CD4-204ENST00000535707 METTL22Q9BUU2 404 aaPredicted RBP11.2□□□□□ -0.62
CD4-204ENST00000535707 BCL2L13Q9BXK5 485 aa11.2□□□□□ -0.62
CD4-204ENST00000535707 NUP98P52948 1817 aa11.2□□□□□ -0.62
CD4-204ENST00000535707 TCERG1O14776 1098 aaKnown RBP11.19□□□□□ -0.62
CD4-204ENST00000535707 ALDH1L1O75891 902 aa11.19□□□□□ -0.62
CD4-204ENST00000535707 PHF14O94880 888 aa11.19□□□□□ -0.62
CD4-204ENST00000535707 GYS1P13807 737 aa11.19□□□□□ -0.62
CD4-204ENST00000535707 TRIM27P14373 513 aa11.19□□□□□ -0.62
CD4-204ENST00000535707 CCT4P50991 539 aaKnown RBP11.19□□□□□ -0.62
CD4-204ENST00000535707 AIMP1Q12904 312 aaKnown RBP11.19□□□□□ -0.62
CD4-204ENST00000535707 PARP10Q53GL7 1025 aa11.19□□□□□ -0.62
CD4-204ENST00000535707 USPL1Q5W0Q7 1092 aa11.19□□□□□ -0.62
CD4-204ENST00000535707 INTS3Q68E01 1043 aaKnown RBP11.19□□□□□ -0.62
CD4-204ENST00000535707 ZNF34Q8IZ26 560 aa11.19□□□□□ -0.62
CD4-204ENST00000535707 DDX27Q96GQ7 796 aaKnown RBP11.19□□□□□ -0.62
CD4-204ENST00000535707 ARID3AQ99856 593 aa11.19□□□□□ -0.62
CD4-204ENST00000535707 ISCA1Q9BUE6 129 aa11.19□□□□□ -0.62
CD4-204ENST00000535707 TBC1D2BQ9UPU7 963 aa11.19□□□□□ -0.62
CD4-204ENST00000535707 MAP3K2Q9Y2U5 619 aa11.19□□□□□ -0.62
CD4-204ENST00000535707 ZNF330Q9Y3S2 320 aaPredicted RBP11.19□□□□□ -0.62
CD4-204ENST00000535707 CCDC191Q8NCU4 936 aa11.18□□□□□ -0.62
CD4-204ENST00000535707 ZBTB3Q9H5J0 574 aa11.18□□□□□ -0.62
CD4-204ENST00000535707 BCL2L12Q9HB09 334 aa11.18□□□□□ -0.62
CD4-204ENST00000535707 CARMIL3Q8ND23 1372 aa11.17□□□□□ -0.62
CD4-204ENST00000535707 TM4SF1P30408 202 aa11.17□□□□□ -0.62
CD4-204ENST00000535707 RRP1P56182 461 aaKnown RBP11.17□□□□□ -0.62
CD4-204ENST00000535707 BEND3Q5T5X7 828 aa11.17□□□□□ -0.62
CD4-204ENST00000535707 DZIP1LQ8IYY4 767 aaKnown RBP11.17□□□□□ -0.62
CD4-204ENST00000535707 FRAT1Q92837 279 aaPredicted RBP11.17□□□□□ -0.62
CD4-204ENST00000535707 MTFR1LQ9H019 292 aa11.17□□□□□ -0.62
CD4-204ENST00000535707 CHMP4BQ9H444 224 aaKnown RBP11.17□□□□□ -0.62
CD4-204ENST00000535707 HDAC5Q9UQL6 1122 aa11.17□□□□□ -0.62
CD4-204ENST00000535707 RIC1Q4ADV7 1423 aa11.17□□□□□ -0.62
CD4-204ENST00000535707 NRXN2Q9P2S2 1712 aa11.16□□□□□ -0.62
CD4-204ENST00000535707 PITPNM1O00562 1244 aa11.16□□□□□ -0.62
CD4-204ENST00000535707 TRIM66O15016 1216 aa11.16□□□□□ -0.62
CD4-204ENST00000535707 HSP90B1P14625 803 aaKnown RBP11.16□□□□□ -0.62
CD4-204ENST00000535707 PDE4DQ08499 809 aa11.16□□□□□ -0.62
CD4-204ENST00000535707 AAMPQ13685 434 aa11.16□□□□□ -0.62
CD4-204ENST00000535707 HLFQ16534 295 aa11.16□□□□□ -0.62
CD4-204ENST00000535707 PPP1R42Q7Z4L9 355 aa11.16□□□□□ -0.62
CD4-204ENST00000535707 FTSJ3Q8IY81 847 aaKnown RBP11.16□□□□□ -0.62
CD4-204ENST00000535707 SETDB2Q96T68 719 aa11.16□□□□□ -0.62
CD4-204ENST00000535707 SRCIN1Q9C0H9 1055 aa11.16□□□□□ -0.62
CD4-204ENST00000535707 NYXQ9GZU5 481 aa11.16□□□□□ -0.62
CD4-204ENST00000535707 UTYO14607 1347 aa11.15□□□□□ -0.62
CD4-204ENST00000535707 NEURL1BA8MQ27 555 aa11.15□□□□□ -0.62
CD4-204ENST00000535707 IGKV5-2P06315 115 aa11.15□□□□□ -0.62
CD4-204ENST00000535707 R3HDM1Q15032 1099 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms