RNA–Protein interactions for RNA: ENST00000535466.5

CD4-203, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-203ENST00000535466 ISCA1Q9BUE6 129 aa8.3□□□□□ -1.08
CD4-203ENST00000535466 LRRC37AA6NMS7 1700 aa8.29□□□□□ -1.08
CD4-203ENST00000535466 LTBP1Q14766 1721 aa8.29□□□□□ -1.08
CD4-203ENST00000535466 PRPF40BQ6NWY9 871 aaKnown RBP8.29□□□□□ -1.08
CD4-203ENST00000535466 KIF6Q6ZMV9 814 aa8.29□□□□□ -1.08
CD4-203ENST00000535466 ZNF652Q9Y2D9 606 aa8.29□□□□□ -1.08
CD4-203ENST00000535466 ATP5J2-PTCD1G3V325 749 aa8.28□□□□□ -1.08
CD4-203ENST00000535466 TCIRG1Q13488 830 aa8.28□□□□□ -1.08
CD4-203ENST00000535466 C9orf131Q5VYM1 1079 aa8.28□□□□□ -1.08
CD4-203ENST00000535466 STYK1Q6J9G0 422 aa8.28□□□□□ -1.08
CD4-203ENST00000535466 CCDC88AQ3V6T2 1871 aa8.28□□□□□ -1.08
CD4-203ENST00000535466 KIF3CO14782 793 aa8.27□□□□□ -1.09
CD4-203ENST00000535466 C21orf2O43822 256 aa8.27□□□□□ -1.09
CD4-203ENST00000535466 VAMP4O75379 141 aa8.27□□□□□ -1.09
CD4-203ENST00000535466 IGKV5-2P06315 115 aa8.27□□□□□ -1.09
CD4-203ENST00000535466 ST5P78524 1137 aa8.27□□□□□ -1.09
CD4-203ENST00000535466 EXOSC9Q06265 439 aaKnown RBP8.27□□□□□ -1.09
CD4-203ENST00000535466 ARHGAP27Q6ZUM4 889 aa8.27□□□□□ -1.09
CD4-203ENST00000535466 WDR63Q8IWG1 891 aa8.27□□□□□ -1.09
CD4-203ENST00000535466 MIER1Q8N108 512 aa8.27□□□□□ -1.09
CD4-203ENST00000535466 TTLL6Q8N841 843 aa8.27□□□□□ -1.09
CD4-203ENST00000535466 PLBD2Q8NHP8 589 aa8.27□□□□□ -1.09
CD4-203ENST00000535466 CDCA7LQ96GN5 454 aa8.27□□□□□ -1.09
CD4-203ENST00000535466 ZNF219Q9P2Y4 722 aaPredicted RBP8.27□□□□□ -1.09
CD4-203ENST00000535466 DBF4Q9UBU7 674 aaPredicted RBP8.27□□□□□ -1.09
CD4-203ENST00000535466 DICER1Q9UPY3 1922 aaKnown RBP8.27□□□□□ -1.09
CD4-203ENST00000535466 H0YIN7 160 aa8.26□□□□□ -1.09
CD4-203ENST00000535466 ATXN8OSP0DMR3 200 aa8.26□□□□□ -1.09
CD4-203ENST00000535466 HCLS1P14317 486 aaPredicted RBP8.26□□□□□ -1.09
CD4-203ENST00000535466 PDE6BP35913 854 aa8.26□□□□□ -1.09
CD4-203ENST00000535466 CACNB1Q02641 598 aaPredicted RBP8.26□□□□□ -1.09
CD4-203ENST00000535466 TWISTNBQ3B726 338 aaPredicted RBP8.26□□□□□ -1.09
CD4-203ENST00000535466 SLC10A5Q5PT55 438 aa8.26□□□□□ -1.09
CD4-203ENST00000535466 ZNF526Q8TF50 670 aaPredicted RBP8.26□□□□□ -1.09
CD4-203ENST00000535466 ZNF622Q969S3 477 aaKnown RBP eCLIP8.26□□□□□ -1.09
CD4-203ENST00000535466 MASTLQ96GX5 879 aa8.26□□□□□ -1.09
CD4-203ENST00000535466 ABCC4O15439 1325 aa8.26□□□□□ -1.09
CD4-203ENST00000535466 POTECB2RU33 542 aa8.25□□□□□ -1.09
CD4-203ENST00000535466 CCER2I3L3R5 266 aa8.25□□□□□ -1.09
CD4-203ENST00000535466 NPR1P16066 1061 aa8.25□□□□□ -1.09
CD4-203ENST00000535466 HOXA10P31260 410 aaPredicted RBP8.25□□□□□ -1.09
CD4-203ENST00000535466 CALD1Q05682 793 aaKnown RBP8.25□□□□□ -1.09
CD4-203ENST00000535466 PARP10Q53GL7 1025 aa8.25□□□□□ -1.09
CD4-203ENST00000535466 TPTE2Q6XPS3 522 aa8.25□□□□□ -1.09
CD4-203ENST00000535466 ANKRD13DQ6ZTN6 518 aa8.25□□□□□ -1.09
CD4-203ENST00000535466 JARID2Q92833 1246 aaPredicted RBP8.25□□□□□ -1.09
CD4-203ENST00000535466 NMRK2Q9NPI5 230 aa8.25□□□□□ -1.09
CD4-203ENST00000535466 HYPKQ9NX55 129 aa8.25□□□□□ -1.09
CD4-203ENST00000535466 RNF181Q9P0P0 153 aa8.25□□□□□ -1.09
CD4-203ENST00000535466 LTBP3Q9NS15 1303 aa8.25□□□□□ -1.09
CD4-203ENST00000535466 DCAF8L1A6NGE4 600 aa8.24□□□□□ -1.09
CD4-203ENST00000535466 SLC4A2P04920 1241 aa8.24□□□□□ -1.09
CD4-203ENST00000535466 CASP7P55210 303 aa8.24□□□□□ -1.09
CD4-203ENST00000535466 TRIM28Q13263 835 aaKnown RBP8.24□□□□□ -1.09
CD4-203ENST00000535466 TRMT2AQ8IZ69 625 aaKnown RBP8.24□□□□□ -1.09
CD4-203ENST00000535466 FAM89AQ96GI7 184 aa8.24□□□□□ -1.09
CD4-203ENST00000535466 MYD88Q99836 296 aa8.24□□□□□ -1.09
CD4-203ENST00000535466 UTP14AQ9BVJ6 771 aaKnown RBP8.24□□□□□ -1.09
CD4-203ENST00000535466 ZNF541Q9H0D2 1346 aa8.24□□□□□ -1.09
CD4-203ENST00000535466 WDR90Q96KV7 1748 aa8.23□□□□□ -1.09
CD4-203ENST00000535466 PI4KAP2A4QPH2 592 aa8.23□□□□□ -1.09
CD4-203ENST00000535466 MYCNP04198 464 aaPredicted RBP8.23□□□□□ -1.09
CD4-203ENST00000535466 FLIIQ13045 1269 aa8.23□□□□□ -1.09
CD4-203ENST00000535466 CWF19L2Q2TBE0 894 aaKnown RBP8.23□□□□□ -1.09
CD4-203ENST00000535466 RTL5Q5HYW3 569 aaPredicted RBP8.23□□□□□ -1.09
CD4-203ENST00000535466 PI4KAP1Q8N8J0 262 aa8.23□□□□□ -1.09
CD4-203ENST00000535466 CELF1Q92879 486 aaKnown RBP8.23□□□□□ -1.09
CD4-203ENST00000535466 CNKSR1Q969H4 720 aa8.23□□□□□ -1.09
CD4-203ENST00000535466 METTL22Q9BUU2 404 aaPredicted RBP8.23□□□□□ -1.09
CD4-203ENST00000535466 NYXQ9GZU5 481 aa8.23□□□□□ -1.09
CD4-203ENST00000535466 MAP3K2Q9Y2U5 619 aa8.23□□□□□ -1.09
CD4-203ENST00000535466 RNF123Q5XPI4 1314 aa8.23□□□□□ -1.09
CD4-203ENST00000535466 SH3TC1Q8TE82 1336 aa8.23□□□□□ -1.09
CD4-203ENST00000535466 ZNF646O15015 1829 aaPredicted RBP8.22□□□□□ -1.09
CD4-203ENST00000535466 NEURL1BA8MQ27 555 aa8.22□□□□□ -1.09
CD4-203ENST00000535466 F6X3S4 739 aa8.22□□□□□ -1.09
CD4-203ENST00000535466 SLFN5Q08AF3 891 aa8.22□□□□□ -1.09
CD4-203ENST00000535466 HSP90AB3PQ58FF7 597 aa8.22□□□□□ -1.09
CD4-203ENST00000535466 CCDC30Q5VVM6 783 aa8.22□□□□□ -1.09
CD4-203ENST00000535466 NPM2Q86SE8 214 aaKnown RBP8.22□□□□□ -1.09
CD4-203ENST00000535466 CRAMP1Q96RY5 1269 aa8.22□□□□□ -1.09
CD4-203ENST00000535466 TAOK3Q9H2K8 898 aa8.22□□□□□ -1.09
CD4-203ENST00000535466 SEC31BQ9NQW1 1179 aa8.22□□□□□ -1.09
CD4-203ENST00000535466 ZNF277Q9NRM2 450 aaPredicted RBP8.22□□□□□ -1.09
CD4-203ENST00000535466 TRMT112Q9UI30 125 aaKnown RBP8.22□□□□□ -1.09
CD4-203ENST00000535466 PDZRN3Q9UPQ7 1066 aa8.22□□□□□ -1.09
CD4-203ENST00000535466 CACNA1FO60840 1977 aa8.22□□□□□ -1.09
CD4-203ENST00000535466 ADAMTSL1Q8N6G6 1762 aa8.22□□□□□ -1.09
CD4-203ENST00000535466 SCN9AQ15858 1988 aa8.21□□□□□ -1.09
CD4-203ENST00000535466 A0A1B0GUL6 1792 aa8.21□□□□□ -1.1
CD4-203ENST00000535466 WTIPA6NIX2 430 aaPredicted RBP8.21□□□□□ -1.1
CD4-203ENST00000535466 PPEF1O14829 653 aaPredicted RBP8.21□□□□□ -1.1
CD4-203ENST00000535466 LMNB1P20700 586 aa8.21□□□□□ -1.1
CD4-203ENST00000535466 FKBP4Q02790 459 aaKnown RBP eCLIP8.21□□□□□ -1.1
CD4-203ENST00000535466 GOLGA2Q08379 1002 aa8.21□□□□□ -1.1
CD4-203ENST00000535466 SF3B3Q15393 1217 aaKnown RBP8.21□□□□□ -1.1
CD4-203ENST00000535466 CCDC93Q567U6 631 aa8.21□□□□□ -1.1
CD4-203ENST00000535466 KSR2Q6VAB6 950 aa8.21□□□□□ -1.1
CD4-203ENST00000535466 PPP1R42Q7Z4L9 355 aa8.21□□□□□ -1.1
CD4-203ENST00000535466 SPEF2Q9C093 1822 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms