RNA–Protein interactions for RNA: ENST00000535191.5

NEK4-207, Transcript of NIMA related kinase 4, humanhuman

TSL 2 BASIC

Gene NEK4, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-207ENST00000535191 PRPF40BQ6NWY9 871 aaKnown RBP16.68■□□□□ 0.26
NEK4-207ENST00000535191 NBPF26B4DH59 902 aa16.67■□□□□ 0.26
NEK4-207ENST00000535191 CASTP20810 708 aaKnown RBP16.67■□□□□ 0.26
NEK4-207ENST00000535191 NMIQ13287 307 aaPredicted RBP16.67■□□□□ 0.26
NEK4-207ENST00000535191 NBPF14Q5TI25 921 aa16.67■□□□□ 0.26
NEK4-207ENST00000535191 NBPF10Q6P3W6 841 aaKnown RBP16.67■□□□□ 0.26
NEK4-207ENST00000535191 NBPF15Q8N660 670 aa16.67■□□□□ 0.26
NEK4-207ENST00000535191 KCNB2Q92953 911 aa16.67■□□□□ 0.26
NEK4-207ENST00000535191 FAM227BQ96M60 508 aa16.67■□□□□ 0.26
NEK4-207ENST00000535191 PKD1L3Q7Z443 1732 aa16.67■□□□□ 0.26
NEK4-207ENST00000535191 SOS2Q07890 1332 aaPredicted RBP16.67■□□□□ 0.26
NEK4-207ENST00000535191 NECTIN1Q15223 517 aa16.67■□□□□ 0.26
NEK4-207ENST00000535191 RUFY3Q7L099 469 aa16.67■□□□□ 0.26
NEK4-207ENST00000535191 GPT2Q8TD30 523 aa16.67■□□□□ 0.26
NEK4-207ENST00000535191 LARP6Q9BRS8 491 aaKnown RBP16.67■□□□□ 0.26
NEK4-207ENST00000535191 XIRP1Q702N8 1843 aaKnown RBP16.66■□□□□ 0.26
NEK4-207ENST00000535191 CPA1P15085 419 aa16.66■□□□□ 0.26
NEK4-207ENST00000535191 ERBB4Q15303 1308 aa16.66■□□□□ 0.26
NEK4-207ENST00000535191 CCDC171Q6TFL3 1326 aa16.66■□□□□ 0.26
NEK4-207ENST00000535191 ZNF445P59923 1031 aa16.65■□□□□ 0.26
NEK4-207ENST00000535191 TFCP2Q12800 502 aa16.65■□□□□ 0.26
NEK4-207ENST00000535191 DDX54Q8TDD1 881 aaKnown RBP16.65■□□□□ 0.26
NEK4-207ENST00000535191 MAP4K1Q92918 833 aa16.65■□□□□ 0.26
NEK4-207ENST00000535191 JAKMIP1Q96N16 626 aaKnown RBP16.65■□□□□ 0.26
NEK4-207ENST00000535191 FSD1Q9BTV5 496 aa16.65■□□□□ 0.26
NEK4-207ENST00000535191 TM6SF1Q9BZW5 370 aa16.65■□□□□ 0.26
NEK4-207ENST00000535191 CASP7P55210 303 aa16.65■□□□□ 0.26
NEK4-207ENST00000535191 NKX1-1Q15270 411 aaPredicted RBP16.65■□□□□ 0.26
NEK4-207ENST00000535191 ADCK5Q3MIX3 580 aa16.65■□□□□ 0.26
NEK4-207ENST00000535191 ZSCAN23Q3MJ62 389 aa16.65■□□□□ 0.26
NEK4-207ENST00000535191 ZSWIM6Q9HCJ5 1215 aa16.65■□□□□ 0.26
NEK4-207ENST00000535191 COL15A1P39059 1388 aa16.65■□□□□ 0.26
NEK4-207ENST00000535191 IL2RBP14784 551 aa16.64■□□□□ 0.26
NEK4-207ENST00000535191 ZKSCAN1P17029 563 aaPredicted RBP16.64■□□□□ 0.26
NEK4-207ENST00000535191 KCNJ4P48050 445 aa16.64■□□□□ 0.26
NEK4-207ENST00000535191 CARD10Q9BWT7 1032 aa16.64■□□□□ 0.26
NEK4-207ENST00000535191 PDRG1Q9NUG6 133 aa16.64■□□□□ 0.26
NEK4-207ENST00000535191 RBM8AQ9Y5S9 174 aaKnown RBP16.64■□□□□ 0.26
NEK4-207ENST00000535191 WDR33Q9C0J8 1336 aaKnown RBP16.64■□□□□ 0.25
NEK4-207ENST00000535191 H7C1W4 665 aa16.64■□□□□ 0.25
NEK4-207ENST00000535191 A1BGP04217 495 aa16.64■□□□□ 0.25
NEK4-207ENST00000535191 TNNI3KQ59H18 835 aa16.64■□□□□ 0.25
NEK4-207ENST00000535191 VPS53Q5VIR6 699 aa16.64■□□□□ 0.25
NEK4-207ENST00000535191 LMBR1LQ6UX01 489 aa16.64■□□□□ 0.25
NEK4-207ENST00000535191 TTLL7Q6ZT98 887 aa16.64■□□□□ 0.25
NEK4-207ENST00000535191 SNRKQ9NRH2 765 aa16.64■□□□□ 0.25
NEK4-207ENST00000535191 CYP46A1Q9Y6A2 500 aa16.64■□□□□ 0.25
NEK4-207ENST00000535191 FPGT-TNNI3KV9GXZ4 949 aa16.64■□□□□ 0.25
NEK4-207ENST00000535191 ATP5JP18859 108 aa16.63■□□□□ 0.25
NEK4-207ENST00000535191 CREB3L3Q68CJ9 461 aa16.63■□□□□ 0.25
NEK4-207ENST00000535191 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.63■□□□□ 0.25
NEK4-207ENST00000535191 EVA1CP58658 441 aa16.63■□□□□ 0.25
NEK4-207ENST00000535191 STRN4Q9NRL3 753 aa16.63■□□□□ 0.25
NEK4-207ENST00000535191 DBNLQ9UJU6 430 aaKnown RBP16.63■□□□□ 0.25
NEK4-207ENST00000535191 A0A0D9SFI3 127 aa16.62■□□□□ 0.25
NEK4-207ENST00000535191 RBM27Q9P2N5 1060 aaKnown RBP16.62■□□□□ 0.25
NEK4-207ENST00000535191 FOXO4P98177 505 aa16.62■□□□□ 0.25
NEK4-207ENST00000535191 EDC3Q96F86 508 aaKnown RBP16.61■□□□□ 0.25
NEK4-207ENST00000535191 ZSCAN31Q96LW9 406 aaPredicted RBP16.61■□□□□ 0.25
NEK4-207ENST00000535191 CWC25Q9NXE8 425 aaPredicted RBP16.61■□□□□ 0.25
NEK4-207ENST00000535191 NSFL1CQ9UNZ2 370 aaKnown RBP16.61■□□□□ 0.25
NEK4-207ENST00000535191 SLC27A2O14975 620 aa16.61■□□□□ 0.25
NEK4-207ENST00000535191 MBD3O95983 291 aa16.61■□□□□ 0.25
NEK4-207ENST00000535191 FOXD4L6Q3SYB3 417 aaPredicted RBP16.61■□□□□ 0.25
NEK4-207ENST00000535191 FOXD4L3Q6VB84 417 aaPredicted RBP16.61■□□□□ 0.25
NEK4-207ENST00000535191 RRAGDQ9NQL2 400 aaPredicted RBP16.61■□□□□ 0.25
NEK4-207ENST00000535191 SMC3Q9UQE7 1217 aa16.61■□□□□ 0.25
NEK4-207ENST00000535191 CHMP3Q9Y3E7 222 aa16.61■□□□□ 0.25
NEK4-207ENST00000535191 ZNF335Q9H4Z2 1342 aaPredicted RBP16.61■□□□□ 0.25
NEK4-207ENST00000535191 PARP4Q9UKK3 1724 aaKnown RBP16.61■□□□□ 0.25
NEK4-207ENST00000535191 NASPP49321 788 aaPredicted RBP16.6■□□□□ 0.25
NEK4-207ENST00000535191 COL5A2P05997 1499 aaPredicted RBP16.6■□□□□ 0.25
NEK4-207ENST00000535191 PSMA5P28066 241 aa16.6■□□□□ 0.25
NEK4-207ENST00000535191 DBNDD2Q9BQY9 259 aa16.6■□□□□ 0.25
NEK4-207ENST00000535191 TMEM63CQ9P1W3 806 aa16.6■□□□□ 0.25
NEK4-207ENST00000535191 LARGE1O95461 756 aa16.59■□□□□ 0.25
NEK4-207ENST00000535191 RNF20Q5VTR2 975 aa16.59■□□□□ 0.25
NEK4-207ENST00000535191 ZBTB3Q9H5J0 574 aa16.59■□□□□ 0.25
NEK4-207ENST00000535191 SH2B1Q9NRF2 756 aaPredicted RBP16.59■□□□□ 0.25
NEK4-207ENST00000535191 STRCQ7RTU9 1775 aa16.59■□□□□ 0.25
NEK4-207ENST00000535191 SYT1P21579 422 aa16.59■□□□□ 0.25
NEK4-207ENST00000535191 CCDC83Q8IWF9 413 aa16.59■□□□□ 0.25
NEK4-207ENST00000535191 RPAP1Q9BWH6 1393 aaPredicted RBP16.59■□□□□ 0.25
NEK4-207ENST00000535191 STX6O43752 255 aa16.58■□□□□ 0.25
NEK4-207ENST00000535191 ZSCAN22P10073 491 aaPredicted RBP16.58■□□□□ 0.25
NEK4-207ENST00000535191 ZNF589Q86UQ0 364 aaPredicted RBP16.58■□□□□ 0.25
NEK4-207ENST00000535191 CCDC191Q8NCU4 936 aa16.58■□□□□ 0.25
NEK4-207ENST00000535191 PRIM1P49642 420 aaKnown RBP16.58■□□□□ 0.24
NEK4-207ENST00000535191 TAF5LO75529 589 aa16.57■□□□□ 0.24
NEK4-207ENST00000535191 USP48Q86UV5 1035 aa16.57■□□□□ 0.24
NEK4-207ENST00000535191 DNAJC2Q99543 621 aaKnown RBP16.57■□□□□ 0.24
NEK4-207ENST00000535191 HAUS7Q99871 368 aa16.57■□□□□ 0.24
NEK4-207ENST00000535191 NDUFB9Q9Y6M9 179 aa16.57■□□□□ 0.24
NEK4-207ENST00000535191 MED23Q9ULK4 1368 aa16.57■□□□□ 0.24
NEK4-207ENST00000535191 ATG9AQ7Z3C6 839 aa16.57■□□□□ 0.24
NEK4-207ENST00000535191 ANP32BQ92688 251 aaKnown RBP16.57■□□□□ 0.24
NEK4-207ENST00000535191 GDPD2Q9HCC8 539 aa16.57■□□□□ 0.24
NEK4-207ENST00000535191 ME3Q16798 604 aa16.56■□□□□ 0.24
NEK4-207ENST00000535191 RBSNQ9H1K0 784 aa16.56■□□□□ 0.24
NEK4-207ENST00000535191 LAMB4A4D0S4 1761 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms