RNA–Protein interactions for RNA: ENST00000535147.5

DDB1-204, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,789 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-204ENST00000535147 SH2B1Q9NRF2 756 aaPredicted RBP12.24□□□□□ -0.45
DDB1-204ENST00000535147 EAF2Q96CJ1 260 aaPredicted RBP12.24□□□□□ -0.45
DDB1-204ENST00000535147 EVI5LQ96CN4 794 aa12.24□□□□□ -0.45
DDB1-204ENST00000535147 ZSCAN31Q96LW9 406 aaPredicted RBP12.24□□□□□ -0.45
DDB1-204ENST00000535147 TM6SF1Q9BZW5 370 aa12.24□□□□□ -0.45
DDB1-204ENST00000535147 SIL1Q9H173 461 aa12.24□□□□□ -0.45
DDB1-204ENST00000535147 KCNF1Q9H3M0 494 aa12.24□□□□□ -0.45
DDB1-204ENST00000535147 DBF4Q9UBU7 674 aaPredicted RBP12.24□□□□□ -0.45
DDB1-204ENST00000535147 PYCARDQ9ULZ3 195 aa12.24□□□□□ -0.45
DDB1-204ENST00000535147 SASH1O94885 1247 aa12.24□□□□□ -0.45
DDB1-204ENST00000535147 HOXB7P09629 217 aa12.24□□□□□ -0.45
DDB1-204ENST00000535147 LIG1P18858 919 aa12.24□□□□□ -0.45
DDB1-204ENST00000535147 DHX37Q8IY37 1157 aaKnown RBP12.24□□□□□ -0.45
DDB1-204ENST00000535147 IP6K1Q92551 441 aa12.24□□□□□ -0.45
DDB1-204ENST00000535147 A0A0D9SFI3 127 aa12.23□□□□□ -0.45
DDB1-204ENST00000535147 AIMP1Q12904 312 aaKnown RBP12.23□□□□□ -0.45
DDB1-204ENST00000535147 KLHDC4Q8TBB5 520 aa12.23□□□□□ -0.45
DDB1-204ENST00000535147 GPATCH3Q96I76 525 aa12.23□□□□□ -0.45
DDB1-204ENST00000535147 BOLA2Q9H3K6 86 aa12.23□□□□□ -0.45
DDB1-204ENST00000535147 TFIP11Q9UBB9 837 aaKnown RBP12.23□□□□□ -0.45
DDB1-204ENST00000535147 MARF1Q9Y4F3 1742 aaKnown RBP12.23□□□□□ -0.45
DDB1-204ENST00000535147 STK3Q13188 491 aa12.23□□□□□ -0.45
DDB1-204ENST00000535147 CKAP2LQ8IYA6 745 aa12.23□□□□□ -0.45
DDB1-204ENST00000535147 ZNF710Q8N1W2 664 aa12.23□□□□□ -0.45
DDB1-204ENST00000535147 KCNB2Q92953 911 aa12.23□□□□□ -0.45
DDB1-204ENST00000535147 KAZALD1Q96I82 304 aa12.23□□□□□ -0.45
DDB1-204ENST00000535147 SUCLG2Q96I99 432 aa12.23□□□□□ -0.45
DDB1-204ENST00000535147 SLC27A2O14975 620 aa12.22□□□□□ -0.45
DDB1-204ENST00000535147 MAP4K1Q92918 833 aa12.22□□□□□ -0.45
DDB1-204ENST00000535147 CRYBG1Q9Y4K1 1723 aa12.22□□□□□ -0.45
DDB1-204ENST00000535147 CCDC192P0DO97 292 aa12.22□□□□□ -0.45
DDB1-204ENST00000535147 KSR2Q6VAB6 950 aa12.22□□□□□ -0.45
DDB1-204ENST00000535147 LUZP1Q86V48 1076 aa12.22□□□□□ -0.45
DDB1-204ENST00000535147 EDC3Q96F86 508 aaKnown RBP12.22□□□□□ -0.45
DDB1-204ENST00000535147 PRIMPOLQ96LW4 560 aa12.22□□□□□ -0.45
DDB1-204ENST00000535147 BICC1Q9H694 974 aaKnown RBP12.22□□□□□ -0.45
DDB1-204ENST00000535147 SPTLC3Q9NUV7 552 aa12.22□□□□□ -0.45
DDB1-204ENST00000535147 GIGYF1O75420 1035 aaPredicted RBP12.21□□□□□ -0.45
DDB1-204ENST00000535147 KRT85P78386 507 aa12.21□□□□□ -0.45
DDB1-204ENST00000535147 KIAA1524Q8TCG1 905 aa12.21□□□□□ -0.45
DDB1-204ENST00000535147 FSD1Q9BTV5 496 aa12.21□□□□□ -0.45
DDB1-204ENST00000535147 AKAP4Q5JQC9 854 aa12.21□□□□□ -0.46
DDB1-204ENST00000535147 MTERF4Q7Z6M4 381 aaKnown RBP12.21□□□□□ -0.46
DDB1-204ENST00000535147 ERC1Q8IUD2 1116 aa12.21□□□□□ -0.46
DDB1-204ENST00000535147 PRDM10Q9NQV6 1147 aa12.21□□□□□ -0.46
DDB1-204ENST00000535147 PHF8Q9UPP1 1060 aa12.21□□□□□ -0.46
DDB1-204ENST00000535147 ALDH1L1O75891 902 aa12.2□□□□□ -0.46
DDB1-204ENST00000535147 G3BP1Q13283 466 aaKnown RBP eCLIP12.2□□□□□ -0.462e-8■■□□□ 12.2
DDB1-204ENST00000535147 LARP1Q6PKG0 1096 aaKnown RBP12.2□□□□□ -0.46
DDB1-204ENST00000535147 BLOC1S2Q6QNY1 142 aa12.2□□□□□ -0.46
DDB1-204ENST00000535147 ZNF589Q86UQ0 364 aaPredicted RBP12.2□□□□□ -0.46
DDB1-204ENST00000535147 NUP62CLQ9H1M0 184 aa12.2□□□□□ -0.46
DDB1-204ENST00000535147 DACT1Q9NYF0 836 aa12.2□□□□□ -0.46
DDB1-204ENST00000535147 GRM8O00222 908 aa12.2□□□□□ -0.46
DDB1-204ENST00000535147 HMGN5P82970 282 aaKnown RBP12.2□□□□□ -0.46
DDB1-204ENST00000535147 MRVI1Q9Y6F6 885 aa12.2□□□□□ -0.46
DDB1-204ENST00000535147 MED1Q15648 1581 aaPredicted RBP12.2□□□□□ -0.46
DDB1-204ENST00000535147 RNMTO43148 476 aaKnown RBP12.19□□□□□ -0.46
DDB1-204ENST00000535147 TYRO3Q06418 890 aa12.19□□□□□ -0.46
DDB1-204ENST00000535147 MAP3K11Q16584 847 aa12.19□□□□□ -0.46
DDB1-204ENST00000535147 SAMD1Q6SPF0 538 aaPredicted RBP12.19□□□□□ -0.46
DDB1-204ENST00000535147 NDUFB9Q9Y6M9 179 aa12.19□□□□□ -0.46
DDB1-204ENST00000535147 CHGBP05060 677 aa12.19□□□□□ -0.46
DDB1-204ENST00000535147 PTGS1P23219 599 aa12.19□□□□□ -0.46
DDB1-204ENST00000535147 TOB2Q14106 344 aaPredicted RBP12.19□□□□□ -0.46
DDB1-204ENST00000535147 FAM200AQ8TCP9 573 aa12.19□□□□□ -0.46
DDB1-204ENST00000535147 KIF3AQ9Y496 699 aa12.19□□□□□ -0.46
DDB1-204ENST00000535147 ANKARQ7Z5J8 1434 aa12.19□□□□□ -0.46
DDB1-204ENST00000535147 PLEKHO1Q53GL0 409 aaPredicted RBP12.18□□□□□ -0.46
DDB1-204ENST00000535147 C1orf141Q5JVX7 400 aa12.18□□□□□ -0.46
DDB1-204ENST00000535147 PXDNQ92626 1479 aa12.18□□□□□ -0.46
DDB1-204ENST00000535147 LTN1O94822 1766 aa12.18□□□□□ -0.46
DDB1-204ENST00000535147 KDM3BQ7LBC6 1761 aa12.18□□□□□ -0.46
DDB1-204ENST00000535147 NPHP4O75161 1426 aaPredicted RBP12.18□□□□□ -0.46
DDB1-204ENST00000535147 GOLGA6L4A6NEF3 574 aa12.18□□□□□ -0.46
DDB1-204ENST00000535147 PSMA5P28066 241 aa12.18□□□□□ -0.46
DDB1-204ENST00000535147 GTF2F1P35269 517 aaKnown RBP eCLIP12.18□□□□□ -0.46
DDB1-204ENST00000535147 LINS1Q8NG48 757 aa12.18□□□□□ -0.46
DDB1-204ENST00000535147 SPATA32Q96LK8 384 aa12.18□□□□□ -0.46
DDB1-204ENST00000535147 TNMDQ9H2S6 317 aa12.18□□□□□ -0.46
DDB1-204ENST00000535147 ARHGAP23Q9P227 1491 aa12.18□□□□□ -0.46
DDB1-204ENST00000535147 JAK2O60674 1132 aa12.18□□□□□ -0.46
DDB1-204ENST00000535147 RPS6KB1P23443 525 aa12.18□□□□□ -0.46
DDB1-204ENST00000535147 ANO6Q4KMQ2 910 aa12.18□□□□□ -0.46
DDB1-204ENST00000535147 THEMISQ8N1K5 641 aaPredicted RBP12.18□□□□□ -0.46
DDB1-204ENST00000535147 DDX11Q96FC9 970 aa12.18□□□□□ -0.46
DDB1-204ENST00000535147 CCDC94Q9BW85 323 aaPredicted RBP12.18□□□□□ -0.46
DDB1-204ENST00000535147 BCL2L12Q9HB09 334 aa12.18□□□□□ -0.46
DDB1-204ENST00000535147 PSME1Q06323 249 aa12.17□□□□□ -0.46
DDB1-204ENST00000535147 LRMPQ12912 555 aa12.17□□□□□ -0.46
DDB1-204ENST00000535147 CBX8Q9HC52 389 aa12.17□□□□□ -0.46
DDB1-204ENST00000535147 NRBP1Q9UHY1 535 aa12.17□□□□□ -0.46
DDB1-204ENST00000535147 SLIT1O75093 1534 aa12.17□□□□□ -0.46
DDB1-204ENST00000535147 RGPD2P0DJD1 1756 aa12.17□□□□□ -0.46
DDB1-204ENST00000535147 RIOK3O14730 519 aaKnown RBP12.17□□□□□ -0.46
DDB1-204ENST00000535147 IGKV5-2P06315 115 aa12.17□□□□□ -0.46
DDB1-204ENST00000535147 PDCP20941 246 aa12.17□□□□□ -0.46
DDB1-204ENST00000535147 ESCO1Q5FWF5 840 aa12.17□□□□□ -0.46
DDB1-204ENST00000535147 EPHA10Q5JZY3 1008 aa12.17□□□□□ -0.46
DDB1-204ENST00000535147 RNF20Q5VTR2 975 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms