RNA–Protein interactions for RNA: ENST00000535021.5

LPCAT3-202, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-202ENST00000535021 CAMKK2Q96RR4 588 aa11.15□□□□□ -0.62
LPCAT3-202ENST00000535021 C9orf78Q9NZ63 289 aaPredicted RBP11.15□□□□□ -0.62
LPCAT3-202ENST00000535021 TUBGCP6Q96RT7 1819 aa11.14□□□□□ -0.63
LPCAT3-202ENST00000535021 CEP85Q6P2H3 762 aa11.14□□□□□ -0.63
LPCAT3-202ENST00000535021 RPAP2Q8IXW5 612 aaPredicted RBP11.14□□□□□ -0.63
LPCAT3-202ENST00000535021 ZNF34Q8IZ26 560 aa11.14□□□□□ -0.63
LPCAT3-202ENST00000535021 ANKRD44Q8N8A2 993 aa11.14□□□□□ -0.63
LPCAT3-202ENST00000535021 CWC25Q9NXE8 425 aaPredicted RBP11.14□□□□□ -0.63
LPCAT3-202ENST00000535021 NARFQ9UHQ1 456 aa11.14□□□□□ -0.63
LPCAT3-202ENST00000535021 IGHDP01880 384 aa11.13□□□□□ -0.63
LPCAT3-202ENST00000535021 SSFA2P28290 1259 aa11.13□□□□□ -0.63
LPCAT3-202ENST00000535021 BAG6P46379 1132 aa11.13□□□□□ -0.63
LPCAT3-202ENST00000535021 CASP7P55210 303 aa11.13□□□□□ -0.63
LPCAT3-202ENST00000535021 TRAPPC3LQ5T215 181 aa11.13□□□□□ -0.63
LPCAT3-202ENST00000535021 CLEC4GQ6UXB4 293 aa11.13□□□□□ -0.63
LPCAT3-202ENST00000535021 CENPQQ7L2Z9 268 aaPredicted RBP11.13□□□□□ -0.63
LPCAT3-202ENST00000535021 SIRT2Q8IXJ6 389 aa11.13□□□□□ -0.63
LPCAT3-202ENST00000535021 ARHGEF1Q92888 912 aaKnown RBP11.13□□□□□ -0.63
LPCAT3-202ENST00000535021 AKT1S1Q96B36 256 aa11.13□□□□□ -0.63
LPCAT3-202ENST00000535021 RWDD1Q9H446 243 aaPredicted RBP11.13□□□□□ -0.63
LPCAT3-202ENST00000535021 BCL2L12Q9HB09 334 aa11.13□□□□□ -0.63
LPCAT3-202ENST00000535021 HDAC5Q9UQL6 1122 aa11.13□□□□□ -0.63
LPCAT3-202ENST00000535021 ZNF652Q9Y2D9 606 aa11.13□□□□□ -0.63
LPCAT3-202ENST00000535021 LRRFIP2Q9Y608 721 aaKnown RBP11.13□□□□□ -0.63
LPCAT3-202ENST00000535021 COL24A1Q17RW2 1714 aa11.12□□□□□ -0.63
LPCAT3-202ENST00000535021 QSER1Q2KHR3 1735 aa11.12□□□□□ -0.63
LPCAT3-202ENST00000535021 USP42Q9H9J4 1324 aaKnown RBP11.12□□□□□ -0.63
LPCAT3-202ENST00000535021 H7C1W4 665 aa11.12□□□□□ -0.63
LPCAT3-202ENST00000535021 EN1Q05925 392 aaPredicted RBP11.12□□□□□ -0.63
LPCAT3-202ENST00000535021 SF3B2Q13435 895 aaKnown RBP11.12□□□□□ -0.63
LPCAT3-202ENST00000535021 EZH2Q15910 746 aaKnown RBP11.12□□□□□ -0.63
LPCAT3-202ENST00000535021 ZNF827Q17R98 1081 aa11.12□□□□□ -0.63
LPCAT3-202ENST00000535021 SMIM5Q71RC9 77 aa11.12□□□□□ -0.63
LPCAT3-202ENST00000535021 NLRP10Q86W26 655 aa11.12□□□□□ -0.63
LPCAT3-202ENST00000535021 CCDC125Q86Z20 511 aa11.12□□□□□ -0.63
LPCAT3-202ENST00000535021 SUCLG2Q96I99 432 aa11.12□□□□□ -0.63
LPCAT3-202ENST00000535021 UBN2Q6ZU65 1347 aa11.11□□□□□ -0.63
LPCAT3-202ENST00000535021 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.11□□□□□ -0.63
LPCAT3-202ENST00000535021 ZPR1O75312 459 aa11.11□□□□□ -0.63
LPCAT3-202ENST00000535021 PCCAP05165 728 aaPredicted RBP11.11□□□□□ -0.63
LPCAT3-202ENST00000535021 GPTP24298 496 aa11.11□□□□□ -0.63
LPCAT3-202ENST00000535021 ATP8B2P98198 1209 aa11.11□□□□□ -0.63
LPCAT3-202ENST00000535021 MTX1Q13505 466 aa11.11□□□□□ -0.63
LPCAT3-202ENST00000535021 PARP10Q53GL7 1025 aa11.11□□□□□ -0.63
LPCAT3-202ENST00000535021 USPL1Q5W0Q7 1092 aa11.11□□□□□ -0.63
LPCAT3-202ENST00000535021 UBE3BQ7Z3V4 1068 aa11.11□□□□□ -0.63
LPCAT3-202ENST00000535021 KAZALD1Q96I82 304 aa11.11□□□□□ -0.63
LPCAT3-202ENST00000535021 SRP68Q9UHB9 627 aaKnown RBP11.11□□□□□ -0.63
LPCAT3-202ENST00000535021 CDHR2Q9BYE9 1310 aa11.1□□□□□ -0.63
LPCAT3-202ENST00000535021 PHF14O94880 888 aa11.1□□□□□ -0.63
LPCAT3-202ENST00000535021 RFC4P35249 363 aa11.1□□□□□ -0.63
LPCAT3-202ENST00000535021 ZBTB38Q8NAP3 1195 aaPredicted RBP11.1□□□□□ -0.63
LPCAT3-202ENST00000535021 LAMB2P55268 1798 aa11.1□□□□□ -0.63
LPCAT3-202ENST00000535021 HMMRO75330 724 aa11.09□□□□□ -0.63
LPCAT3-202ENST00000535021 RABL6Q3YEC7 729 aaPredicted RBP11.09□□□□□ -0.63
LPCAT3-202ENST00000535021 EPHA10Q5JZY3 1008 aa11.09□□□□□ -0.63
LPCAT3-202ENST00000535021 DEFB132Q7Z7B7 95 aa11.09□□□□□ -0.63
LPCAT3-202ENST00000535021 SMC5Q8IY18 1101 aa11.09□□□□□ -0.63
LPCAT3-202ENST00000535021 FLAD1Q8NFF5 587 aa11.09□□□□□ -0.63
LPCAT3-202ENST00000535021 SSH3Q8TE77 659 aa11.09□□□□□ -0.63
LPCAT3-202ENST00000535021 JARID2Q92833 1246 aaPredicted RBP11.09□□□□□ -0.63
LPCAT3-202ENST00000535021 PLA2G12BQ9BX93 195 aa11.09□□□□□ -0.63
LPCAT3-202ENST00000535021 BICC1Q9H694 974 aaKnown RBP11.09□□□□□ -0.63
LPCAT3-202ENST00000535021 NIP7Q9Y221 180 aaKnown RBP eCLIP11.09□□□□□ -0.63
LPCAT3-202ENST00000535021 MYH3P11055 1940 aa11.08□□□□□ -0.64
LPCAT3-202ENST00000535021 PNMA6EA0A0J9YXQ4 647 aa11.08□□□□□ -0.64
LPCAT3-202ENST00000535021 NTSR2O95665 410 aa11.08□□□□□ -0.64
LPCAT3-202ENST00000535021 SUSD4Q5VX71 490 aa11.08□□□□□ -0.64
LPCAT3-202ENST00000535021 TBC1D9BQ66K14 1250 aa11.08□□□□□ -0.64
LPCAT3-202ENST00000535021 PPP1R42Q7Z4L9 355 aa11.08□□□□□ -0.64
LPCAT3-202ENST00000535021 GCC1Q96CN9 775 aa11.08□□□□□ -0.64
LPCAT3-202ENST00000535021 DCTPP1Q9H773 170 aa11.08□□□□□ -0.64
LPCAT3-202ENST00000535021 ANO8Q9HCE9 1232 aaPredicted RBP11.08□□□□□ -0.64
LPCAT3-202ENST00000535021 TFCP2L1Q9NZI6 479 aa11.08□□□□□ -0.64
LPCAT3-202ENST00000535021 TRMT112Q9UI30 125 aaKnown RBP11.08□□□□□ -0.64
LPCAT3-202ENST00000535021 DDX60Q8IY21 1712 aaKnown RBP11.08□□□□□ -0.64
LPCAT3-202ENST00000535021 PNPLA7Q6ZV29 1317 aa11.08□□□□□ -0.64
LPCAT3-202ENST00000535021 GYS1P13807 737 aa11.07□□□□□ -0.64
LPCAT3-202ENST00000535021 FOXO4P98177 505 aa11.07□□□□□ -0.64
LPCAT3-202ENST00000535021 SLC15A2Q16348 729 aa11.07□□□□□ -0.64
LPCAT3-202ENST00000535021 FAM89AQ96GI7 184 aa11.07□□□□□ -0.64
LPCAT3-202ENST00000535021 UTP14AQ9BVJ6 771 aaKnown RBP11.07□□□□□ -0.64
LPCAT3-202ENST00000535021 STK32BQ9NY57 414 aa11.07□□□□□ -0.64
LPCAT3-202ENST00000535021 SH3TC1Q8TE82 1336 aa11.07□□□□□ -0.64
LPCAT3-202ENST00000535021 SRGAP3O43295 1099 aa11.06□□□□□ -0.64
LPCAT3-202ENST00000535021 RTL5Q5HYW3 569 aaPredicted RBP11.06□□□□□ -0.64
LPCAT3-202ENST00000535021 COL23A1Q86Y22 540 aaPredicted RBP11.06□□□□□ -0.64
LPCAT3-202ENST00000535021 SETDB2Q96T68 719 aa11.06□□□□□ -0.64
LPCAT3-202ENST00000535021 CARMIL3Q8ND23 1372 aa11.05□□□□□ -0.64
LPCAT3-202ENST00000535021 IRS4O14654 1257 aaPredicted RBP11.05□□□□□ -0.64
LPCAT3-202ENST00000535021 NFIXQ14938 502 aa11.05□□□□□ -0.64
LPCAT3-202ENST00000535021 BICDL1Q6ZP65 573 aa11.05□□□□□ -0.64
LPCAT3-202ENST00000535021 SYNE4Q8N205 404 aa11.05□□□□□ -0.64
LPCAT3-202ENST00000535021 CASZ1Q86V15 1759 aa11.05□□□□□ -0.64
LPCAT3-202ENST00000535021 CSF1RP07333 972 aa11.04□□□□□ -0.64
LPCAT3-202ENST00000535021 HSP90B1P14625 803 aaKnown RBP11.04□□□□□ -0.64
LPCAT3-202ENST00000535021 RFX5P48382 616 aaPredicted RBP11.04□□□□□ -0.64
LPCAT3-202ENST00000535021 LMBR1LQ6UX01 489 aa11.04□□□□□ -0.64
LPCAT3-202ENST00000535021 SP7Q8TDD2 431 aaPredicted RBP11.04□□□□□ -0.64
LPCAT3-202ENST00000535021 UPF1Q92900 1129 aaKnown RBP eCLIP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms