RNA–Protein interactions for RNA: ENST00000534825.5

CAPRIN1-217, Transcript of cell cycle associated protein 1, humanhuman

TSL 3

Gene CAPRIN1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-217ENST00000534825 SLX4Q8IY92 1834 aa23.11■■□□□ 1.29
CAPRIN1-217ENST00000534825 LMNB1P20700 586 aa23.11■■□□□ 1.29
CAPRIN1-217ENST00000534825 ALDH1B1P30837 517 aa23.11■■□□□ 1.29
CAPRIN1-217ENST00000534825 HOXA10P31260 410 aaPredicted RBP23.11■■□□□ 1.29
CAPRIN1-217ENST00000534825 C3orf67Q6ZVT6 689 aa23.11■■□□□ 1.29
CAPRIN1-217ENST00000534825 SYNE4Q8N205 404 aa23.11■■□□□ 1.29
CAPRIN1-217ENST00000534825 ISCA1Q9BUE6 129 aa23.11■■□□□ 1.29
CAPRIN1-217ENST00000534825 CHMP4AQ9BY43 222 aa23.11■■□□□ 1.29
CAPRIN1-217ENST00000534825 SPINK5Q9NQ38 1064 aaPredicted RBP23.11■■□□□ 1.29
CAPRIN1-217ENST00000534825 RIC1Q4ADV7 1423 aa23.09■■□□□ 1.29
CAPRIN1-217ENST00000534825 CCER2I3L3R5 266 aa23.09■■□□□ 1.29
CAPRIN1-217ENST00000534825 TWISTNBQ3B726 338 aaPredicted RBP23.09■■□□□ 1.29
CAPRIN1-217ENST00000534825 FANCIQ9NVI1 1328 aa23.08■■□□□ 1.29
CAPRIN1-217ENST00000534825 TRIM28Q13263 835 aaKnown RBP23.08■■□□□ 1.29
CAPRIN1-217ENST00000534825 NLRP3Q96P20 1036 aa23.08■■□□□ 1.29
CAPRIN1-217ENST00000534825 TRMT112Q9UI30 125 aaKnown RBP23.08■■□□□ 1.29
CAPRIN1-217ENST00000534825 RNF123Q5XPI4 1314 aa23.08■■□□□ 1.28
CAPRIN1-217ENST00000534825 SBF1O95248 1867 aa23.07■■□□□ 1.28
CAPRIN1-217ENST00000534825 ATP5J2-PTCD1G3V325 749 aa23.07■■□□□ 1.28
CAPRIN1-217ENST00000534825 C1QTNF8P60827 252 aa23.07■■□□□ 1.28
CAPRIN1-217ENST00000534825 SOGA3Q5TF21 947 aa23.07■■□□□ 1.28
CAPRIN1-217ENST00000534825 OLFM4Q6UX06 510 aa23.07■■□□□ 1.28
CAPRIN1-217ENST00000534825 LTBP3Q9NS15 1303 aa23.07■■□□□ 1.28
CAPRIN1-217ENST00000534825 RIC3Q7Z5B4 369 aa23.06■■□□□ 1.28
CAPRIN1-217ENST00000534825 ZNF428Q96B54 188 aa23.06■■□□□ 1.28
CAPRIN1-217ENST00000534825 CRAMP1Q96RY5 1269 aa23.06■■□□□ 1.28
CAPRIN1-217ENST00000534825 TNRC6CQ9HCJ0 1690 aaKnown RBP23.06■■□□□ 1.28
CAPRIN1-217ENST00000534825 TCERG1O14776 1098 aaKnown RBP23.05■■□□□ 1.28
CAPRIN1-217ENST00000534825 KIF3CO14782 793 aa23.05■■□□□ 1.28
CAPRIN1-217ENST00000534825 VAMP4O75379 141 aa23.05■■□□□ 1.28
CAPRIN1-217ENST00000534825 HCLS1P14317 486 aaPredicted RBP23.05■■□□□ 1.28
CAPRIN1-217ENST00000534825 GOLGA2Q08379 1002 aa23.05■■□□□ 1.28
CAPRIN1-217ENST00000534825 DIEXFQ68CQ4 756 aaKnown RBP23.05■■□□□ 1.28
CAPRIN1-217ENST00000534825 ZNF521Q96K83 1311 aa23.05■■□□□ 1.28
CAPRIN1-217ENST00000534825 RPGRQ92834 1020 aaKnown RBP23.04■■□□□ 1.28
CAPRIN1-217ENST00000534825 TAOK3Q9H2K8 898 aa23.04■■□□□ 1.28
CAPRIN1-217ENST00000534825 SH3TC1Q8TE82 1336 aa23.04■■□□□ 1.28
CAPRIN1-217ENST00000534825 EXOSC9Q06265 439 aaKnown RBP23.03■■□□□ 1.28
CAPRIN1-217ENST00000534825 CCDC93Q567U6 631 aa23.03■■□□□ 1.28
CAPRIN1-217ENST00000534825 RBM17Q96I25 401 aaKnown RBP23.03■■□□□ 1.28
CAPRIN1-217ENST00000534825 ZC3H4Q9UPT8 1303 aaKnown RBP23.03■■□□□ 1.28
CAPRIN1-217ENST00000534825 SLC4A2P04920 1241 aa23.02■■□□□ 1.28
CAPRIN1-217ENST00000534825 G2E3Q7L622 706 aa23.02■■□□□ 1.28
CAPRIN1-217ENST00000534825 FAM89AQ96GI7 184 aa23.02■■□□□ 1.28
CAPRIN1-217ENST00000534825 NMRK2Q9NPI5 230 aa23.02■■□□□ 1.28
CAPRIN1-217ENST00000534825 FER1L6Q2WGJ9 1857 aa23.02■■□□□ 1.28
CAPRIN1-217ENST00000534825 RTKN2Q8IZC4 609 aa23.01■■□□□ 1.27
CAPRIN1-217ENST00000534825 METTL22Q9BUU2 404 aaPredicted RBP23.01■■□□□ 1.27
CAPRIN1-217ENST00000534825 STK31Q9BXU1 1019 aa23.01■■□□□ 1.27
CAPRIN1-217ENST00000534825 ANKRD36CQ5JPF3 1778 aa23■■□□□ 1.27
CAPRIN1-217ENST00000534825 ARFGEF2Q9Y6D5 1785 aa23■■□□□ 1.27
CAPRIN1-217ENST00000534825 DDX58O95786 925 aaKnown RBP23■■□□□ 1.27
CAPRIN1-217ENST00000534825 KSR2Q6VAB6 950 aa23■■□□□ 1.27
CAPRIN1-217ENST00000534825 MYD88Q99836 296 aa23■■□□□ 1.27
CAPRIN1-217ENST00000534825 PI4KAP2A4QPH2 592 aa22.99■■□□□ 1.27
CAPRIN1-217ENST00000534825 GLTPD2A6NH11 291 aa22.99■■□□□ 1.27
CAPRIN1-217ENST00000534825 FKBP4Q02790 459 aaKnown RBP eCLIP22.99■■□□□ 1.27
CAPRIN1-217ENST00000534825 CC2D2BQ6DHV5 1058 aa22.99■■□□□ 1.27
CAPRIN1-217ENST00000534825 SLC51AQ86UW1 340 aa22.99■■□□□ 1.27
CAPRIN1-217ENST00000534825 PI4KAP1Q8N8J0 262 aa22.99■■□□□ 1.27
CAPRIN1-217ENST00000534825 MYH16Q9H6N6 1097 aa22.99■■□□□ 1.27
CAPRIN1-217ENST00000534825 MAP3K2Q9Y2U5 619 aa22.99■■□□□ 1.27
CAPRIN1-217ENST00000534825 SNED1Q8TER0 1413 aa22.99■■□□□ 1.27
CAPRIN1-217ENST00000534825 CCDC191Q8NCU4 936 aa22.98■■□□□ 1.27
CAPRIN1-217ENST00000534825 KDM2BQ8NHM5 1336 aa22.98■■□□□ 1.27
CAPRIN1-217ENST00000534825 CACNA1SQ13698 1873 aa22.97■■□□□ 1.27
CAPRIN1-217ENST00000534825 SF3B3Q15393 1217 aaKnown RBP22.97■■□□□ 1.27
CAPRIN1-217ENST00000534825 RTL5Q5HYW3 569 aaPredicted RBP22.97■■□□□ 1.27
CAPRIN1-217ENST00000534825 ZBTB38Q8NAP3 1195 aaPredicted RBP22.97■■□□□ 1.27
CAPRIN1-217ENST00000534825 BBOX1O75936 387 aa22.96■■□□□ 1.27
CAPRIN1-217ENST00000534825 IGKV5-2P06315 115 aa22.96■■□□□ 1.27
CAPRIN1-217ENST00000534825 PSMD1Q99460 953 aa22.96■■□□□ 1.27
CAPRIN1-217ENST00000534825 RRAGCQ9HB90 399 aa22.96■■□□□ 1.27
CAPRIN1-217ENST00000534825 ZNF277Q9NRM2 450 aaPredicted RBP22.96■■□□□ 1.27
CAPRIN1-217ENST00000534825 ABCC4O15439 1325 aa22.96■■□□□ 1.27
CAPRIN1-217ENST00000534825 CCDC88AQ3V6T2 1871 aa22.96■■□□□ 1.27
CAPRIN1-217ENST00000534825 IRS4O14654 1257 aaPredicted RBP22.95■■□□□ 1.26
CAPRIN1-217ENST00000534825 PPEF1O14829 653 aaPredicted RBP22.95■■□□□ 1.26
CAPRIN1-217ENST00000534825 MIER1Q8N108 512 aa22.95■■□□□ 1.26
CAPRIN1-217ENST00000534825 ATP6V0A2Q9Y487 856 aa22.95■■□□□ 1.26
CAPRIN1-217ENST00000534825 FLIIQ13045 1269 aa22.94■■□□□ 1.26
CAPRIN1-217ENST00000534825 GRIPAP1Q4V328 841 aa22.94■■□□□ 1.26
CAPRIN1-217ENST00000534825 DDX46Q7L014 1031 aaKnown RBP22.94■■□□□ 1.26
CAPRIN1-217ENST00000534825 CWC25Q9NXE8 425 aaPredicted RBP22.94■■□□□ 1.26
CAPRIN1-217ENST00000534825 PCCAP05165 728 aaPredicted RBP22.93■■□□□ 1.26
CAPRIN1-217ENST00000534825 DPY19L2Q6NUT2 758 aa22.93■■□□□ 1.26
CAPRIN1-217ENST00000534825 JARID2Q92833 1246 aaPredicted RBP22.93■■□□□ 1.26
CAPRIN1-217ENST00000534825 POTECB2RU33 542 aa22.92■■□□□ 1.26
CAPRIN1-217ENST00000534825 TOMM70O94826 608 aa22.92■■□□□ 1.26
CAPRIN1-217ENST00000534825 GRAPQ13588 217 aa22.92■■□□□ 1.26
CAPRIN1-217ENST00000534825 SP8Q8IXZ3 490 aa22.92■■□□□ 1.26
CAPRIN1-217ENST00000534825 GRAPLQ8TC17 118 aaPredicted RBP22.92■■□□□ 1.26
CAPRIN1-217ENST00000534825 IARSP41252 1262 aaKnown RBP22.91■■□□□ 1.26
CAPRIN1-217ENST00000534825 SLFN5Q08AF3 891 aa22.9■■□□□ 1.26
CAPRIN1-217ENST00000534825 DICER1Q9UPY3 1922 aaKnown RBP22.89■■□□□ 1.25
CAPRIN1-217ENST00000534825 NEURL1BA8MQ27 555 aa22.89■■□□□ 1.25
CAPRIN1-217ENST00000534825 DDNO94850 711 aaPredicted RBP22.89■■□□□ 1.25
CAPRIN1-217ENST00000534825 VEGFAP15692 232 aaPredicted RBP22.89■■□□□ 1.25
CAPRIN1-217ENST00000534825 CWF19L2Q2TBE0 894 aaKnown RBP22.89■■□□□ 1.25
CAPRIN1-217ENST00000534825 CELF1Q92879 486 aaKnown RBP22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms