RNA–Protein interactions for RNA: ENST00000534669.1

GEN1-207, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

TSL 2

Gene GEN1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-207ENST00000534669 KNSTRNQ9Y448 316 aa9.68□□□□□ -0.86
GEN1-207ENST00000534669 KCNQ3O43525 872 aa9.67□□□□□ -0.86
GEN1-207ENST00000534669 C21orf2O43822 256 aa9.67□□□□□ -0.86
GEN1-207ENST00000534669 VEGFAP15692 232 aaPredicted RBP9.67□□□□□ -0.86
GEN1-207ENST00000534669 TNS4Q8IZW8 715 aa9.67□□□□□ -0.86
GEN1-207ENST00000534669 VSIG10Q8N0Z9 540 aa9.67□□□□□ -0.86
GEN1-207ENST00000534669 TBC1D2BQ9UPU7 963 aa9.67□□□□□ -0.86
GEN1-207ENST00000534669 HEG1Q9ULI3 1381 aa9.66□□□□□ -0.86
GEN1-207ENST00000534669 H0YIN7 160 aa9.66□□□□□ -0.86
GEN1-207ENST00000534669 PER1O15534 1290 aaPredicted RBP9.66□□□□□ -0.86
GEN1-207ENST00000534669 A1BGP04217 495 aa9.66□□□□□ -0.86
GEN1-207ENST00000534669 PIP4K2AP48426 406 aaPredicted RBP9.66□□□□□ -0.86
GEN1-207ENST00000534669 CC2D1BQ5T0F9 858 aaKnown RBP9.66□□□□□ -0.86
GEN1-207ENST00000534669 TMEM92Q6UXU6 159 aa9.66□□□□□ -0.86
GEN1-207ENST00000534669 ZNF622Q969S3 477 aaKnown RBP eCLIP9.66□□□□□ -0.86
GEN1-207ENST00000534669 PRAMEF22A3QJZ6 481 aa9.65□□□□□ -0.86
GEN1-207ENST00000534669 DIAPH1O60610 1272 aaKnown RBP9.65□□□□□ -0.86
GEN1-207ENST00000534669 DDNO94850 711 aaPredicted RBP9.65□□□□□ -0.86
GEN1-207ENST00000534669 CAMTA2O94983 1202 aa9.65□□□□□ -0.86
GEN1-207ENST00000534669 BRIP1Q9BX63 1249 aa9.65□□□□□ -0.86
GEN1-207ENST00000534669 ZNF330Q9Y3S2 320 aaPredicted RBP9.65□□□□□ -0.86
GEN1-207ENST00000534669 HOXB3P14651 431 aaPredicted RBP9.64□□□□□ -0.87
GEN1-207ENST00000534669 CNGB1Q14028 1251 aaPredicted RBP9.64□□□□□ -0.87
GEN1-207ENST00000534669 DOK7Q18PE1 504 aa9.64□□□□□ -0.87
GEN1-207ENST00000534669 ERFEQ4G0M1 354 aa9.64□□□□□ -0.87
GEN1-207ENST00000534669 ZNF790Q6PG37 636 aa9.64□□□□□ -0.87
GEN1-207ENST00000534669 OLFM4Q6UX06 510 aa9.64□□□□□ -0.87
GEN1-207ENST00000534669 MKRN1Q9UHC7 482 aaKnown RBP9.64□□□□□ -0.87
GEN1-207ENST00000534669 ADAMTSL1Q8N6G6 1762 aa9.63□□□□□ -0.87
GEN1-207ENST00000534669 STARD3NLO95772 234 aa9.63□□□□□ -0.87
GEN1-207ENST00000534669 PRPF40BQ6NWY9 871 aaKnown RBP9.63□□□□□ -0.87
GEN1-207ENST00000534669 TTC5Q8N0Z6 440 aa9.63□□□□□ -0.87
GEN1-207ENST00000534669 PHACTR3Q96KR7 559 aa9.63□□□□□ -0.87
GEN1-207ENST00000534669 SCN4AP35499 1836 aa9.63□□□□□ -0.87
GEN1-207ENST00000534669 CEMIPQ8WUJ3 1361 aa9.63□□□□□ -0.87
GEN1-207ENST00000534669 ZNF541Q9H0D2 1346 aa9.62□□□□□ -0.87
GEN1-207ENST00000534669 LTBP3Q9NS15 1303 aa9.62□□□□□ -0.87
GEN1-207ENST00000534669 A0A087WZG4 1122 aa9.62□□□□□ -0.87
GEN1-207ENST00000534669 GNAT3A8MTJ3 354 aa9.62□□□□□ -0.87
GEN1-207ENST00000534669 U2SURPO15042 1029 aaKnown RBP9.62□□□□□ -0.87
GEN1-207ENST00000534669 SRGNP10124 158 aa9.62□□□□□ -0.87
GEN1-207ENST00000534669 PDE6BP35913 854 aa9.62□□□□□ -0.87
GEN1-207ENST00000534669 IL6STP40189 918 aaPredicted RBP9.62□□□□□ -0.87
GEN1-207ENST00000534669 SLC51AQ86UW1 340 aa9.62□□□□□ -0.87
GEN1-207ENST00000534669 C7orf43Q8WVR3 580 aa9.62□□□□□ -0.87
GEN1-207ENST00000534669 TAOK3Q9H2K8 898 aa9.62□□□□□ -0.87
GEN1-207ENST00000534669 RYDENQ9NUL5 291 aaKnown RBP9.62□□□□□ -0.87
GEN1-207ENST00000534669 USP16Q9Y5T5 823 aa9.62□□□□□ -0.87
GEN1-207ENST00000534669 COL4A5P29400 1685 aa9.61□□□□□ -0.87
GEN1-207ENST00000534669 TEFQ10587 303 aa9.61□□□□□ -0.87
GEN1-207ENST00000534669 STYK1Q6J9G0 422 aa9.61□□□□□ -0.87
GEN1-207ENST00000534669 CNBD1Q8NA66 436 aa9.61□□□□□ -0.87
GEN1-207ENST00000534669 LTBP1Q14766 1721 aa9.61□□□□□ -0.87
GEN1-207ENST00000534669 PASKQ96RG2 1323 aa9.6□□□□□ -0.87
GEN1-207ENST00000534669 SNED1Q8TER0 1413 aa9.6□□□□□ -0.87
GEN1-207ENST00000534669 NBPF26B4DH59 902 aa9.6□□□□□ -0.87
GEN1-207ENST00000534669 RIMBP2O15034 1052 aa9.6□□□□□ -0.87
GEN1-207ENST00000534669 FOXN1O15353 648 aa9.6□□□□□ -0.87
GEN1-207ENST00000534669 NBPF10Q6P3W6 841 aaKnown RBP9.6□□□□□ -0.87
GEN1-207ENST00000534669 DZIP3Q86Y13 1208 aaKnown RBP9.6□□□□□ -0.87
GEN1-207ENST00000534669 ZNF710Q8N1W2 664 aa9.6□□□□□ -0.87
GEN1-207ENST00000534669 NBPF15Q8N660 670 aa9.6□□□□□ -0.87
GEN1-207ENST00000534669 GAS2L2Q8NHY3 880 aa9.6□□□□□ -0.87
GEN1-207ENST00000534669 FMNL2Q96PY5 1086 aa9.6□□□□□ -0.87
GEN1-207ENST00000534669 SETDB2Q96T68 719 aa9.6□□□□□ -0.87
GEN1-207ENST00000534669 CNTNAP1P78357 1384 aa9.6□□□□□ -0.87
GEN1-207ENST00000534669 LAMB4A4D0S4 1761 aa9.6□□□□□ -0.87
GEN1-207ENST00000534669 DLG5Q8TDM6 1919 aa9.59□□□□□ -0.87
GEN1-207ENST00000534669 PRKAR2BP31323 418 aa9.59□□□□□ -0.87
GEN1-207ENST00000534669 CNKSR1Q969H4 720 aa9.59□□□□□ -0.87
GEN1-207ENST00000534669 MASTLQ96GX5 879 aa9.59□□□□□ -0.87
GEN1-207ENST00000534669 RSPH6AQ9H0K4 717 aa9.59□□□□□ -0.87
GEN1-207ENST00000534669 TAF1DQ9H5J8 278 aaPredicted RBP9.59□□□□□ -0.87
GEN1-207ENST00000534669 ZNF277Q9NRM2 450 aaPredicted RBP9.59□□□□□ -0.87
GEN1-207ENST00000534669 NUP98P52948 1817 aa9.59□□□□□ -0.88
GEN1-207ENST00000534669 BTBD11A6QL63 1104 aa9.58□□□□□ -0.88
GEN1-207ENST00000534669 PPP1R37O75864 691 aa9.58□□□□□ -0.88
GEN1-207ENST00000534669 ITGBL1O95965 494 aaPredicted RBP9.58□□□□□ -0.88
GEN1-207ENST00000534669 EMP3P54852 163 aa9.58□□□□□ -0.88
GEN1-207ENST00000534669 ST5P78524 1137 aa9.58□□□□□ -0.88
GEN1-207ENST00000534669 DCTN1Q14203 1278 aa9.58□□□□□ -0.88
GEN1-207ENST00000534669 MCM10Q7L590 875 aa9.58□□□□□ -0.88
GEN1-207ENST00000534669 MARVELD3Q96A59 401 aa9.58□□□□□ -0.88
GEN1-207ENST00000534669 TEX13AQ9BXU3 409 aaPredicted RBP9.58□□□□□ -0.88
GEN1-207ENST00000534669 ZSWIM6Q9HCJ5 1215 aa9.58□□□□□ -0.88
GEN1-207ENST00000534669 PDZRN3Q9UPQ7 1066 aa9.58□□□□□ -0.88
GEN1-207ENST00000534669 ABCC12Q96J65 1359 aa9.58□□□□□ -0.88
GEN1-207ENST00000534669 KDM3BQ7LBC6 1761 aa9.58□□□□□ -0.88
GEN1-207ENST00000534669 FAM177BA6PVY3 158 aa9.57□□□□□ -0.88
GEN1-207ENST00000534669 VEGFBP49765 207 aa9.57□□□□□ -0.88
GEN1-207ENST00000534669 HLFQ16534 295 aa9.57□□□□□ -0.88
GEN1-207ENST00000534669 CCDC93Q567U6 631 aa9.57□□□□□ -0.88
GEN1-207ENST00000534669 NBPF5PQ86XG9 351 aaPredicted RBP9.57□□□□□ -0.88
GEN1-207ENST00000534669 CDAN1Q8IWY9 1227 aa9.57□□□□□ -0.88
GEN1-207ENST00000534669 NPC1L1Q9UHC9 1359 aa9.57□□□□□ -0.88
GEN1-207ENST00000534669 KLRG2A4D1S0 409 aaPredicted RBP9.56□□□□□ -0.88
GEN1-207ENST00000534669 NPHP1O15259 732 aa9.56□□□□□ -0.88
GEN1-207ENST00000534669 HOXB1P14653 301 aaPredicted RBP9.56□□□□□ -0.88
GEN1-207ENST00000534669 FKBP4Q02790 459 aaKnown RBP eCLIP9.56□□□□□ -0.88
GEN1-207ENST00000534669 FMR1Q06787 632 aaKnown RBP eCLIP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms