RNA–Protein interactions for RNA: ENST00000534579.5

CTNND1-237, Transcript of catenin delta 1, humanhuman

TSL 5 BASIC

Gene CTNND1, Length 6,024 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-237ENST00000534579 TSNARE1Q96NA8 513 aa10.23□□□□□ -0.77
CTNND1-237ENST00000534579 GOPCQ9HD26 462 aa10.23□□□□□ -0.77
CTNND1-237ENST00000534579 ECM2O94769 699 aaPredicted RBP10.23□□□□□ -0.77
CTNND1-237ENST00000534579 WASF1Q92558 559 aa10.23□□□□□ -0.77
CTNND1-237ENST00000534579 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.23□□□□□ -0.77
CTNND1-237ENST00000534579 GSTTP1A0A1W2PQM5 241 aa10.23□□□□□ -0.77
CTNND1-237ENST00000534579 ST5P78524 1137 aa10.23□□□□□ -0.77
CTNND1-237ENST00000534579 XAGE3Q8WTP9 111 aa10.23□□□□□ -0.77
CTNND1-237ENST00000534579 ZSCAN31Q96LW9 406 aaPredicted RBP10.23□□□□□ -0.77
CTNND1-237ENST00000534579 BIN2Q9UBW5 565 aaPredicted RBP10.23□□□□□ -0.77
CTNND1-237ENST00000534579 EIF3JO75822 258 aaKnown RBP10.22□□□□□ -0.77
CTNND1-237ENST00000534579 MBD3O95983 291 aa10.22□□□□□ -0.77
CTNND1-237ENST00000534579 UBE4AQ14139 1066 aa10.22□□□□□ -0.77
CTNND1-237ENST00000534579 MTHFSDQ2M296 383 aaKnown RBP10.22□□□□□ -0.77
CTNND1-237ENST00000534579 PRPF40BQ6NWY9 871 aaKnown RBP10.22□□□□□ -0.77
CTNND1-237ENST00000534579 SMARCC1Q92922 1105 aaPredicted RBP10.22□□□□□ -0.77
CTNND1-237ENST00000534579 ARL1P40616 181 aaPredicted RBP10.22□□□□□ -0.77
CTNND1-237ENST00000534579 LMAN1P49257 510 aa10.22□□□□□ -0.77
CTNND1-237ENST00000534579 WDR33Q9C0J8 1336 aaKnown RBP10.22□□□□□ -0.77
CTNND1-237ENST00000534579 TARBP1Q13395 1621 aaKnown RBP10.22□□□□□ -0.77
CTNND1-237ENST00000534579 ZFYVE16Q7Z3T8 1539 aa10.22□□□□□ -0.77
CTNND1-237ENST00000534579 SMC1AQ14683 1233 aaKnown RBP10.22□□□□□ -0.77
CTNND1-237ENST00000534579 SAMD9Q5K651 1589 aa10.22□□□□□ -0.77
CTNND1-237ENST00000534579 TESK2Q96S53 571 aa10.22□□□□□ -0.77
CTNND1-237ENST00000534579 PZPP20742 1482 aa10.22□□□□□ -0.77
CTNND1-237ENST00000534579 KAT6BQ8WYB5 2073 aa10.22□□□□□ -0.77
CTNND1-237ENST00000534579 CCDC178Q5BJE1 867 aa10.21□□□□□ -0.77
CTNND1-237ENST00000534579 COPS6Q7L5N1 327 aa10.21□□□□□ -0.77
CTNND1-237ENST00000534579 CEP131Q9UPN4 1083 aa10.21□□□□□ -0.77
CTNND1-237ENST00000534579 PUF60Q9UHX1 559 aaKnown RBP10.21□□□□□ -0.77
CTNND1-237ENST00000534579 NEO1Q92859 1461 aa10.21□□□□□ -0.77
CTNND1-237ENST00000534579 MYO1BO43795 1136 aa10.21□□□□□ -0.77
CTNND1-237ENST00000534579 ERLIN1O75477 346 aa10.21□□□□□ -0.77
CTNND1-237ENST00000534579 TNNT1P13805 278 aa10.21□□□□□ -0.77
CTNND1-237ENST00000534579 FERMT1Q9BQL6 677 aa10.21□□□□□ -0.77
CTNND1-237ENST00000534579 BTG4Q9NY30 223 aa10.21□□□□□ -0.77
CTNND1-237ENST00000534579 NFATC2IPQ8NCF5 419 aa10.21□□□□□ -0.78
CTNND1-237ENST00000534579 TNMDQ9H2S6 317 aa10.21□□□□□ -0.78
CTNND1-237ENST00000534579 CFAP65Q6ZU64 1925 aaKnown RBP10.21□□□□□ -0.78
CTNND1-237ENST00000534579 HOXC9P31274 260 aa10.21□□□□□ -0.78
CTNND1-237ENST00000534579 SLF2Q8IX21 1173 aa10.21□□□□□ -0.78
CTNND1-237ENST00000534579 SETDB2Q96T68 719 aa10.21□□□□□ -0.78
CTNND1-237ENST00000534579 ARHGEF12Q9NZN5 1544 aa10.21□□□□□ -0.78
CTNND1-237ENST00000534579 CCDC152Q4G0S7 254 aa10.2□□□□□ -0.78
CTNND1-237ENST00000534579 LRRC45Q96CN5 670 aa10.2□□□□□ -0.78
CTNND1-237ENST00000534579 KRT85P78386 507 aa10.2□□□□□ -0.78
CTNND1-237ENST00000534579 ZNF444Q8N0Y2 327 aaPredicted RBP10.2□□□□□ -0.78
CTNND1-237ENST00000534579 DDX11Q96FC9 970 aa10.2□□□□□ -0.78
CTNND1-237ENST00000534579 EYA1Q99502 592 aa10.2□□□□□ -0.78
CTNND1-237ENST00000534579 RRP9O43818 475 aaKnown RBP10.2□□□□□ -0.78
CTNND1-237ENST00000534579 ORAI2Q96SN7 254 aa10.2□□□□□ -0.78
CTNND1-237ENST00000534579 CFAP45Q9UL16 551 aa10.2□□□□□ -0.78
CTNND1-237ENST00000534579 ADGRL2O95490 1459 aa10.2□□□□□ -0.78
CTNND1-237ENST00000534579 GOLIM4O00461 696 aa10.2□□□□□ -0.78
CTNND1-237ENST00000534579 SNRKQ9NRH2 765 aa10.2□□□□□ -0.78
CTNND1-237ENST00000534579 RANBP6O60518 1105 aaKnown RBP10.2□□□□□ -0.78
CTNND1-237ENST00000534579 TAF12Q16514 161 aa10.2□□□□□ -0.78
CTNND1-237ENST00000534579 SAMM50Q9Y512 469 aa10.2□□□□□ -0.78
CTNND1-237ENST00000534579 OTUD6BQ8N6M0 293 aa10.19□□□□□ -0.78
CTNND1-237ENST00000534579 BICD1Q96G01 975 aa10.19□□□□□ -0.78
CTNND1-237ENST00000534579 CARD14Q9BXL6 1004 aa10.19□□□□□ -0.78
CTNND1-237ENST00000534579 ECHDC1Q9NTX5 307 aa10.19□□□□□ -0.78
CTNND1-237ENST00000534579 ZFYVE9O95405 1425 aa10.19□□□□□ -0.78
CTNND1-237ENST00000534579 MAP3K19Q56UN5 1328 aa10.19□□□□□ -0.78
CTNND1-237ENST00000534579 MTERF4Q7Z6M4 381 aaKnown RBP10.19□□□□□ -0.78
CTNND1-237ENST00000534579 IP6K1Q92551 441 aa10.19□□□□□ -0.78
CTNND1-237ENST00000534579 SIRT1Q96EB6 747 aa10.19□□□□□ -0.78
CTNND1-237ENST00000534579 CFAP74Q9C0B2 1584 aa10.19□□□□□ -0.78
CTNND1-237ENST00000534579 ZWINTO95229 277 aa10.19□□□□□ -0.78
CTNND1-237ENST00000534579 TMEM266Q2M3C6 531 aa10.19□□□□□ -0.78
CTNND1-237ENST00000534579 UPF3BQ9BZI7 483 aaKnown RBP10.19□□□□□ -0.78
CTNND1-237ENST00000534579 POLR3AO14802 1390 aaPredicted RBP10.19□□□□□ -0.78
CTNND1-237ENST00000534579 MAP3K5Q99683 1374 aa10.19□□□□□ -0.78
CTNND1-237ENST00000534579 ZNF213O14771 459 aa10.19□□□□□ -0.78
CTNND1-237ENST00000534579 C8orf58Q8NAV2 365 aa10.19□□□□□ -0.78
CTNND1-237ENST00000534579 CCDC148Q8NFR7 591 aa10.19□□□□□ -0.78
CTNND1-237ENST00000534579 RAB3IL1Q8TBN0 382 aa10.19□□□□□ -0.78
CTNND1-237ENST00000534579 MCM4P33991 863 aa10.19□□□□□ -0.78
CTNND1-237ENST00000534579 SPA17Q15506 151 aa10.19□□□□□ -0.78
CTNND1-237ENST00000534579 FKBP15Q5T1M5 1219 aa10.19□□□□□ -0.78
CTNND1-237ENST00000534579 UTP14AQ9BVJ6 771 aaKnown RBP10.19□□□□□ -0.78
CTNND1-237ENST00000534579 NIP7Q9Y221 180 aaKnown RBP eCLIP10.19□□□□□ -0.78
CTNND1-237ENST00000534579 BAG4O95429 457 aaKnown RBP10.18□□□□□ -0.78
CTNND1-237ENST00000534579 TTF1Q15361 905 aaPredicted RBP10.18□□□□□ -0.78
CTNND1-237ENST00000534579 CACNA2D4Q7Z3S7 1137 aa10.18□□□□□ -0.78
CTNND1-237ENST00000534579 VPS36Q86VN1 386 aa10.18□□□□□ -0.78
CTNND1-237ENST00000534579 PCDH11XQ9BZA7 1347 aa10.18□□□□□ -0.78
CTNND1-237ENST00000534579 PCDH11YQ9BZA8 1340 aa10.18□□□□□ -0.78
CTNND1-237ENST00000534579 EVI5LQ96CN4 794 aa10.18□□□□□ -0.78
CTNND1-237ENST00000534579 CABP5Q9NP86 173 aa10.18□□□□□ -0.78
CTNND1-237ENST00000534579 MYO5CQ9NQX4 1742 aa10.18□□□□□ -0.78
CTNND1-237ENST00000534579 PARD3Q8TEW0 1356 aa10.18□□□□□ -0.78
CTNND1-237ENST00000534579 UQCRHP07919 91 aa10.18□□□□□ -0.78
CTNND1-237ENST00000534579 DCAF5Q96JK2 942 aa10.18□□□□□ -0.78
CTNND1-237ENST00000534579 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.18□□□□□ -0.787e-6■□□□□ 8.3
CTNND1-237ENST00000534579 IQCA1Q86XH1 822 aa10.17□□□□□ -0.78
CTNND1-237ENST00000534579 DZIP3Q86Y13 1208 aaKnown RBP10.17□□□□□ -0.78
CTNND1-237ENST00000534579 CCDC83Q8IWF9 413 aa10.17□□□□□ -0.78
CTNND1-237ENST00000534579 MEIS3Q99687 375 aa10.17□□□□□ -0.78
CTNND1-237ENST00000534579 UQCRHLA0A096LP55 91 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms