RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 KCNA3P22001 575 aa17.96■□□□□ 0.47
VPS11-205ENST00000534551 HSP90AB3PQ58FF7 597 aa17.96■□□□□ 0.47
VPS11-205ENST00000534551 C3orf67Q6ZVT6 689 aa17.96■□□□□ 0.47
VPS11-205ENST00000534551 SPEF2Q9C093 1822 aa17.95■□□□□ 0.46
VPS11-205ENST00000534551 F6X3S4 739 aa17.95■□□□□ 0.46
VPS11-205ENST00000534551 C2CD5Q86YS7 1000 aa17.95■□□□□ 0.46
VPS11-205ENST00000534551 MRPL50Q8N5N7 158 aaKnown RBP17.95■□□□□ 0.46
VPS11-205ENST00000534551 YTHDC1Q96MU7 727 aaKnown RBP17.95■□□□□ 0.46
VPS11-205ENST00000534551 CHD4Q14839 1912 aa17.95■□□□□ 0.46
VPS11-205ENST00000534551 DDX58O95786 925 aaKnown RBP17.94■□□□□ 0.46
VPS11-205ENST00000534551 TGFB2P61812 414 aa17.94■□□□□ 0.46
VPS11-205ENST00000534551 RTL5Q5HYW3 569 aaPredicted RBP17.94■□□□□ 0.46
VPS11-205ENST00000534551 KSR2Q6VAB6 950 aa17.94■□□□□ 0.46
VPS11-205ENST00000534551 METTL22Q9BUU2 404 aaPredicted RBP17.94■□□□□ 0.46
VPS11-205ENST00000534551 RIC1Q4ADV7 1423 aa17.93■□□□□ 0.46
VPS11-205ENST00000534551 IGKV5-2P06315 115 aa17.93■□□□□ 0.46
VPS11-205ENST00000534551 CWF19L2Q2TBE0 894 aaKnown RBP17.93■□□□□ 0.46
VPS11-205ENST00000534551 PARP10Q53GL7 1025 aa17.93■□□□□ 0.46
VPS11-205ENST00000534551 TPTE2Q6XPS3 522 aa17.93■□□□□ 0.46
VPS11-205ENST00000534551 JARID2Q92833 1246 aaPredicted RBP17.93■□□□□ 0.46
VPS11-205ENST00000534551 UTP14AQ9BVJ6 771 aaKnown RBP17.93■□□□□ 0.46
VPS11-205ENST00000534551 BRIP1Q9BX63 1249 aa17.93■□□□□ 0.46
VPS11-205ENST00000534551 CHMP4AQ9BY43 222 aa17.93■□□□□ 0.46
VPS11-205ENST00000534551 NYXQ9GZU5 481 aa17.93■□□□□ 0.46
VPS11-205ENST00000534551 SMC4Q9NTJ3 1288 aa17.93■□□□□ 0.46
VPS11-205ENST00000534551 GTF2E1P29083 439 aaPredicted RBP17.92■□□□□ 0.46
VPS11-205ENST00000534551 CCDC88AQ3V6T2 1871 aa17.91■□□□□ 0.46
VPS11-205ENST00000534551 HCLS1P14317 486 aaPredicted RBP17.91■□□□□ 0.46
VPS11-205ENST00000534551 GPR162Q16538 588 aa17.91■□□□□ 0.46
VPS11-205ENST00000534551 PPP1R42Q7Z4L9 355 aa17.91■□□□□ 0.46
VPS11-205ENST00000534551 SLC51AQ86UW1 340 aa17.91■□□□□ 0.46
VPS11-205ENST00000534551 DNAAF4Q8WXU2 420 aa17.91■□□□□ 0.46
VPS11-205ENST00000534551 TRMT112Q9UI30 125 aaKnown RBP17.91■□□□□ 0.46
VPS11-205ENST00000534551 BCS1LQ9Y276 419 aa17.91■□□□□ 0.46
VPS11-205ENST00000534551 FAM89AQ96GI7 184 aa17.9■□□□□ 0.46
VPS11-205ENST00000534551 SH3TC1Q8TE82 1336 aa17.9■□□□□ 0.46
VPS11-205ENST00000534551 FER1L6Q2WGJ9 1857 aa17.89■□□□□ 0.45
VPS11-205ENST00000534551 NEURL1BA8MQ27 555 aa17.89■□□□□ 0.45
VPS11-205ENST00000534551 H0YIN7 160 aa17.89■□□□□ 0.45
VPS11-205ENST00000534551 PDE6BP35913 854 aa17.89■□□□□ 0.45
VPS11-205ENST00000534551 RARSP54136 660 aaKnown RBP17.89■□□□□ 0.45
VPS11-205ENST00000534551 ZNF622Q969S3 477 aaKnown RBP eCLIP17.89■□□□□ 0.45
VPS11-205ENST00000534551 SRGNP10124 158 aa17.88■□□□□ 0.45
VPS11-205ENST00000534551 ALDH1L2Q3SY69 923 aa17.88■□□□□ 0.45
VPS11-205ENST00000534551 CWC25Q9NXE8 425 aaPredicted RBP17.88■□□□□ 0.45
VPS11-205ENST00000534551 SBF1O95248 1867 aa17.88■□□□□ 0.45
VPS11-205ENST00000534551 CT47B1P0C2W7 299 aaPredicted RBP17.87■□□□□ 0.45
VPS11-205ENST00000534551 SLC4A10Q6U841 1118 aa17.87■□□□□ 0.45
VPS11-205ENST00000534551 PIM2Q9P1W9 311 aa17.87■□□□□ 0.45
VPS11-205ENST00000534551 ZNF219Q9P2Y4 722 aaPredicted RBP17.87■□□□□ 0.45
VPS11-205ENST00000534551 TNNQ9UQP3 1299 aa17.87■□□□□ 0.45
VPS11-205ENST00000534551 BCAR3O75815 825 aa17.86■□□□□ 0.45
VPS11-205ENST00000534551 NEXNQ0ZGT2 675 aa17.86■□□□□ 0.45
VPS11-205ENST00000534551 TRIM28Q13263 835 aaKnown RBP17.86■□□□□ 0.45
VPS11-205ENST00000534551 DALRD3Q5D0E6 543 aaKnown RBP17.86■□□□□ 0.45
VPS11-205ENST00000534551 CCDC191Q8NCU4 936 aa17.86■□□□□ 0.45
VPS11-205ENST00000534551 RNF123Q5XPI4 1314 aa17.86■□□□□ 0.45
VPS11-205ENST00000534551 LRRC37AA6NMS7 1700 aa17.86■□□□□ 0.45
VPS11-205ENST00000534551 KLRG2A4D1S0 409 aaPredicted RBP17.85■□□□□ 0.45
VPS11-205ENST00000534551 CRY2Q49AN0 593 aa17.85■□□□□ 0.45
VPS11-205ENST00000534551 BEND3Q5T5X7 828 aa17.85■□□□□ 0.45
VPS11-205ENST00000534551 PRPF40BQ6NWY9 871 aaKnown RBP17.85■□□□□ 0.45
VPS11-205ENST00000534551 TIAM2Q8IVF5 1701 aa17.85■□□□□ 0.45
VPS11-205ENST00000534551 NOB1Q9ULX3 412 aaKnown RBP17.85■□□□□ 0.45
VPS11-205ENST00000534551 PTPRCP08575 1304 aa17.84■□□□□ 0.45
VPS11-205ENST00000534551 IRS4O14654 1257 aaPredicted RBP17.84■□□□□ 0.45
VPS11-205ENST00000534551 OLFM4Q6UX06 510 aa17.84■□□□□ 0.45
VPS11-205ENST00000534551 ZBTB38Q8NAP3 1195 aaPredicted RBP17.84■□□□□ 0.45
VPS11-205ENST00000534551 MASTLQ96GX5 879 aa17.84■□□□□ 0.45
VPS11-205ENST00000534551 PCCAP05165 728 aaPredicted RBP17.83■□□□□ 0.44
VPS11-205ENST00000534551 NPR1P16066 1061 aa17.83■□□□□ 0.44
VPS11-205ENST00000534551 GCKRQ14397 625 aa17.83■□□□□ 0.44
VPS11-205ENST00000534551 SLC10A5Q5PT55 438 aa17.83■□□□□ 0.44
VPS11-205ENST00000534551 STYK1Q6J9G0 422 aa17.83■□□□□ 0.44
VPS11-205ENST00000534551 UBE3BQ7Z3V4 1068 aa17.83■□□□□ 0.44
VPS11-205ENST00000534551 TTLL6Q8N841 843 aa17.83■□□□□ 0.44
VPS11-205ENST00000534551 LINS1Q8NG48 757 aa17.83■□□□□ 0.44
VPS11-205ENST00000534551 RPGRQ92834 1020 aaKnown RBP17.83■□□□□ 0.44
VPS11-205ENST00000534551 A0A1B0GUL6 1792 aa17.83■□□□□ 0.44
VPS11-205ENST00000534551 ABCC4O15439 1325 aa17.82■□□□□ 0.44
VPS11-205ENST00000534551 RASSF7Q02833 373 aa17.82■□□□□ 0.44
VPS11-205ENST00000534551 CCDC85AQ96PX6 553 aaPredicted RBP17.82■□□□□ 0.44
VPS11-205ENST00000534551 DCAF8L1A6NGE4 600 aa17.81■□□□□ 0.44
VPS11-205ENST00000534551 CASP7P55210 303 aa17.81■□□□□ 0.44
VPS11-205ENST00000534551 NLRP3Q96P20 1036 aa17.81■□□□□ 0.44
VPS11-205ENST00000534551 DICER1Q9UPY3 1922 aaKnown RBP17.8■□□□□ 0.44
VPS11-205ENST00000534551 KIF16BQ96L93 1317 aa17.8■□□□□ 0.44
VPS11-205ENST00000534551 CDHR2Q9BYE9 1310 aa17.8■□□□□ 0.44
VPS11-205ENST00000534551 C21orf2O43822 256 aa17.8■□□□□ 0.44
VPS11-205ENST00000534551 FRAT1Q92837 279 aaPredicted RBP17.8■□□□□ 0.44
VPS11-205ENST00000534551 PDZRN3Q9UPQ7 1066 aa17.8■□□□□ 0.44
VPS11-205ENST00000534551 LTBP1Q14766 1721 aa17.8■□□□□ 0.44
VPS11-205ENST00000534551 SNED1Q8TER0 1413 aa17.8■□□□□ 0.44
VPS11-205ENST00000534551 BRPF1P55201 1214 aaPredicted RBP17.79■□□□□ 0.44
VPS11-205ENST00000534551 CNKSR1Q969H4 720 aa17.79■□□□□ 0.44
VPS11-205ENST00000534551 H7C1W4 665 aa17.78■□□□□ 0.44
VPS11-205ENST00000534551 TRIM27P14373 513 aa17.78■□□□□ 0.44
VPS11-205ENST00000534551 ARHGAP27Q6ZUM4 889 aa17.78■□□□□ 0.44
VPS11-205ENST00000534551 SRCIN1Q9C0H9 1055 aa17.78■□□□□ 0.44
VPS11-205ENST00000534551 DUOX1Q9NRD9 1551 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 172.1 ms