RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 ZNF530Q6P9A1 599 aaPredicted RBP22.73■■□□□ 1.23
SMPD1-210ENST00000534405 NOL8Q76FK4 1167 aaKnown RBP22.73■■□□□ 1.23
SMPD1-210ENST00000534405 PI4K2BQ8TCG2 481 aa22.73■■□□□ 1.23
SMPD1-210ENST00000534405 ANKLE2Q86XL3 938 aa22.72■■□□□ 1.23
SMPD1-210ENST00000534405 TRERF1Q96PN7 1200 aa22.72■■□□□ 1.23
SMPD1-210ENST00000534405 ADCY9O60503 1353 aa22.72■■□□□ 1.23
SMPD1-210ENST00000534405 BTBD11A6QL63 1104 aa22.72■■□□□ 1.23
SMPD1-210ENST00000534405 RAB11FIP3O75154 756 aa22.72■■□□□ 1.23
SMPD1-210ENST00000534405 HOXB7P09629 217 aa22.72■■□□□ 1.23
SMPD1-210ENST00000534405 MCCP23508 829 aa22.72■■□□□ 1.23
SMPD1-210ENST00000534405 ANAPC15P60006 121 aa22.72■■□□□ 1.23
SMPD1-210ENST00000534405 RBM6P78332 1123 aaKnown RBP22.72■■□□□ 1.23
SMPD1-210ENST00000534405 USP48Q86UV5 1035 aa22.72■■□□□ 1.23
SMPD1-210ENST00000534405 TMEM87AQ8NBN3 555 aa22.72■■□□□ 1.23
SMPD1-210ENST00000534405 PXDNQ92626 1479 aa22.72■■□□□ 1.23
SMPD1-210ENST00000534405 SLFNL1Q499Z3 407 aa22.71■■□□□ 1.23
SMPD1-210ENST00000534405 AKAP4Q5JQC9 854 aa22.71■■□□□ 1.23
SMPD1-210ENST00000534405 UPF3BQ9BZI7 483 aaKnown RBP22.71■■□□□ 1.23
SMPD1-210ENST00000534405 LMO7Q8WWI1 1683 aa22.71■■□□□ 1.23
SMPD1-210ENST00000534405 TNNT1P13805 278 aa22.71■■□□□ 1.23
SMPD1-210ENST00000534405 TEFQ10587 303 aa22.71■■□□□ 1.23
SMPD1-210ENST00000534405 CUL4AQ13619 759 aa22.71■■□□□ 1.23
SMPD1-210ENST00000534405 FUCA2Q9BTY2 467 aa22.71■■□□□ 1.23
SMPD1-210ENST00000534405 KCNH5Q8NCM2 988 aa22.7■■□□□ 1.22
SMPD1-210ENST00000534405 IL17RAQ96F46 866 aa22.7■■□□□ 1.22
SMPD1-210ENST00000534405 NOL10Q9BSC4 688 aaKnown RBP22.7■■□□□ 1.22
SMPD1-210ENST00000534405 ADGRL3Q9HAR2 1447 aa22.7■■□□□ 1.22
SMPD1-210ENST00000534405 NOP2P46087 812 aaKnown RBP22.7■■□□□ 1.22
SMPD1-210ENST00000534405 PSEN1P49768 467 aa22.7■■□□□ 1.22
SMPD1-210ENST00000534405 TNNT3P45378 269 aaPredicted RBP22.69■■□□□ 1.22
SMPD1-210ENST00000534405 C16orf45Q96MC5 204 aaPredicted RBP22.69■■□□□ 1.22
SMPD1-210ENST00000534405 MCM2P49736 904 aa22.69■■□□□ 1.22
SMPD1-210ENST00000534405 ZBTB9Q96C00 473 aa22.69■■□□□ 1.22
SMPD1-210ENST00000534405 ORAI2Q96SN7 254 aa22.69■■□□□ 1.22
SMPD1-210ENST00000534405 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.69■■□□□ 1.22
SMPD1-210ENST00000534405 SPC24Q8NBT2 197 aa22.68■■□□□ 1.22
SMPD1-210ENST00000534405 PHRF1Q9P1Y6 1649 aaKnown RBP22.68■■□□□ 1.22
SMPD1-210ENST00000534405 GCP02774 474 aa22.68■■□□□ 1.22
SMPD1-210ENST00000534405 PROSER3Q2NL68 480 aa22.68■■□□□ 1.22
SMPD1-210ENST00000534405 ST7Q9NRC1 585 aa22.68■■□□□ 1.22
SMPD1-210ENST00000534405 RNMTO43148 476 aaKnown RBP22.67■■□□□ 1.22
SMPD1-210ENST00000534405 PLCB2Q00722 1185 aa22.67■■□□□ 1.22
SMPD1-210ENST00000534405 PLEKHO1Q53GL0 409 aaPredicted RBP22.67■■□□□ 1.22
SMPD1-210ENST00000534405 INTS4Q96HW7 963 aaKnown RBP22.67■■□□□ 1.22
SMPD1-210ENST00000534405 RSPH14Q9UHP6 348 aa22.67■■□□□ 1.22
SMPD1-210ENST00000534405 PRAMEF22A3QJZ6 481 aa22.67■■□□□ 1.22
SMPD1-210ENST00000534405 HSPA4P34932 840 aa22.67■■□□□ 1.22
SMPD1-210ENST00000534405 MUM1L1Q5H9M0 696 aa22.67■■□□□ 1.22
SMPD1-210ENST00000534405 ARHGEF25Q86VW2 580 aa22.67■■□□□ 1.22
SMPD1-210ENST00000534405 RASSF4Q9H2L5 321 aa22.67■■□□□ 1.22
SMPD1-210ENST00000534405 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.66■■□□□ 1.22
SMPD1-210ENST00000534405 PTGS1P23219 599 aa22.66■■□□□ 1.22
SMPD1-210ENST00000534405 FBXO38Q6PIJ6 1188 aa22.66■■□□□ 1.22
SMPD1-210ENST00000534405 GDPD2Q9HCC8 539 aa22.66■■□□□ 1.22
SMPD1-210ENST00000534405 CTR9Q6PD62 1173 aa22.66■■□□□ 1.22
SMPD1-210ENST00000534405 SGSM2O43147 1006 aa22.65■■□□□ 1.22
SMPD1-210ENST00000534405 DBF4Q9UBU7 674 aaPredicted RBP22.64■■□□□ 1.21
SMPD1-210ENST00000534405 NCAPD2Q15021 1401 aa22.64■■□□□ 1.21
SMPD1-210ENST00000534405 AXIN2Q9Y2T1 843 aa22.63■■□□□ 1.21
SMPD1-210ENST00000534405 MAP3K2Q9Y2U5 619 aa22.63■■□□□ 1.21
SMPD1-210ENST00000534405 DHX16O60231 1041 aaKnown RBP22.63■■□□□ 1.21
SMPD1-210ENST00000534405 GIGYF1O75420 1035 aaPredicted RBP22.63■■□□□ 1.21
SMPD1-210ENST00000534405 AMOTQ4VCS5 1084 aa22.63■■□□□ 1.21
SMPD1-210ENST00000534405 ANKRD24Q8TF21 1146 aa22.63■■□□□ 1.21
SMPD1-210ENST00000534405 HDAC5Q9UQL6 1122 aa22.63■■□□□ 1.21
SMPD1-210ENST00000534405 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.63■■□□□ 1.21
SMPD1-210ENST00000534405 RAD50Q92878 1312 aa22.63■■□□□ 1.21
SMPD1-210ENST00000534405 CLGNO14967 610 aa22.62■■□□□ 1.21
SMPD1-210ENST00000534405 BMS1Q14692 1282 aaKnown RBP22.62■■□□□ 1.21
SMPD1-210ENST00000534405 C1orf141Q5JVX7 400 aa22.62■■□□□ 1.21
SMPD1-210ENST00000534405 LSG1Q9H089 658 aaKnown RBP22.62■■□□□ 1.21
SMPD1-210ENST00000534405 HEG1Q9ULI3 1381 aa22.62■■□□□ 1.21
SMPD1-210ENST00000534405 CWF19L2Q2TBE0 894 aaKnown RBP22.61■■□□□ 1.21
SMPD1-210ENST00000534405 LMOD2Q6P5Q4 547 aa22.61■■□□□ 1.21
SMPD1-210ENST00000534405 CHMP4CQ96CF2 233 aa22.61■■□□□ 1.21
SMPD1-210ENST00000534405 ERO1AQ96HE7 468 aa22.61■■□□□ 1.21
SMPD1-210ENST00000534405 ZNF446Q9NWS9 450 aa22.61■■□□□ 1.21
SMPD1-210ENST00000534405 SLIT3O75094 1523 aa22.61■■□□□ 1.21
SMPD1-210ENST00000534405 EPB41L2O43491 1005 aaKnown RBP22.61■■□□□ 1.21
SMPD1-210ENST00000534405 MTX1Q13505 466 aa22.61■■□□□ 1.21
SMPD1-210ENST00000534405 ZNF215Q9UL58 517 aaPredicted RBP22.61■■□□□ 1.21
SMPD1-210ENST00000534405 UBE2HP62256 183 aa22.6■■□□□ 1.21
SMPD1-210ENST00000534405 CEP135Q66GS9 1140 aa22.6■■□□□ 1.21
SMPD1-210ENST00000534405 RASEFQ8IZ41 740 aa22.6■■□□□ 1.21
SMPD1-210ENST00000534405 CNTROBQ8N137 903 aa22.6■■□□□ 1.21
SMPD1-210ENST00000534405 PA2G4Q9UQ80 394 aaKnown RBP22.6■■□□□ 1.21
SMPD1-210ENST00000534405 SNX14Q9Y5W7 946 aa22.6■■□□□ 1.21
SMPD1-210ENST00000534405 WDR33Q9C0J8 1336 aaKnown RBP22.6■■□□□ 1.21
SMPD1-210ENST00000534405 USP42Q9H9J4 1324 aaKnown RBP22.6■■□□□ 1.21
SMPD1-210ENST00000534405 CRYBG1Q9Y4K1 1723 aa22.6■■□□□ 1.21
SMPD1-210ENST00000534405 NFATC2IPQ8NCF5 419 aa22.6■■□□□ 1.21
SMPD1-210ENST00000534405 RPAP1Q9BWH6 1393 aaPredicted RBP22.6■■□□□ 1.21
SMPD1-210ENST00000534405 ZNF142P52746 1687 aaPredicted RBP22.6■■□□□ 1.21
SMPD1-210ENST00000534405 GTF2A1P52655 376 aaPredicted RBP22.59■■□□□ 1.21
SMPD1-210ENST00000534405 CWC27Q6UX04 472 aaKnown RBP22.59■■□□□ 1.21
SMPD1-210ENST00000534405 OS9Q13438 667 aaPredicted RBP22.59■■□□□ 1.21
SMPD1-210ENST00000534405 HSP90AB4PQ58FF6 505 aa22.59■■□□□ 1.21
SMPD1-210ENST00000534405 AXDND1Q5T1B0 1012 aaPredicted RBP22.59■■□□□ 1.21
SMPD1-210ENST00000534405 RNF20Q5VTR2 975 aa22.59■■□□□ 1.21
SMPD1-210ENST00000534405 KSR2Q6VAB6 950 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms