RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 AAMPQ13685 434 aa11.53□□□□□ -0.56
CASP4-213ENST00000534356 SLC16A10Q8TF71 515 aa11.53□□□□□ -0.56
CASP4-213ENST00000534356 TRERF1Q96PN7 1200 aa11.53□□□□□ -0.56
CASP4-213ENST00000534356 ATXN7L1Q9ULK2 861 aaPredicted RBP11.53□□□□□ -0.56
CASP4-213ENST00000534356 FZD6O60353 706 aa11.52□□□□□ -0.57
CASP4-213ENST00000534356 VSIG8P0DPA2 414 aa11.52□□□□□ -0.57
CASP4-213ENST00000534356 RGL4Q8IZJ4 473 aa11.52□□□□□ -0.57
CASP4-213ENST00000534356 GPR152Q8TDT2 470 aa11.52□□□□□ -0.57
CASP4-213ENST00000534356 CCDC87Q9NVE4 849 aa11.52□□□□□ -0.57
CASP4-213ENST00000534356 NFX1Q12986 1120 aaKnown RBP11.51□□□□□ -0.57
CASP4-213ENST00000534356 GRIN2CQ14957 1233 aa11.51□□□□□ -0.57
CASP4-213ENST00000534356 EDEM1Q92611 657 aa11.51□□□□□ -0.57
CASP4-213ENST00000534356 PHF24Q9UPV7 400 aa11.51□□□□□ -0.57
CASP4-213ENST00000534356 RTCBQ9Y3I0 505 aaKnown RBP11.51□□□□□ -0.57
CASP4-213ENST00000534356 CD33P20138 364 aa11.5□□□□□ -0.57
CASP4-213ENST00000534356 FGFR3P22607 806 aa11.5□□□□□ -0.57
CASP4-213ENST00000534356 KCNQ4P56696 695 aa11.5□□□□□ -0.57
CASP4-213ENST00000534356 DNM1Q05193 864 aaKnown RBP11.5□□□□□ -0.57
CASP4-213ENST00000534356 LAMC2Q13753 1193 aa11.5□□□□□ -0.57
CASP4-213ENST00000534356 GAS6Q14393 721 aa11.5□□□□□ -0.57
CASP4-213ENST00000534356 ZNF775Q96BV0 537 aaPredicted RBP11.5□□□□□ -0.57
CASP4-213ENST00000534356 MARK1Q9P0L2 795 aa11.5□□□□□ -0.57
CASP4-213ENST00000534356 KCNH4Q9UQ05 1017 aa11.5□□□□□ -0.57
CASP4-213ENST00000534356 CTBSQ01459 385 aa11.49□□□□□ -0.57
CASP4-213ENST00000534356 FAM13BQ9NYF5 915 aa11.49□□□□□ -0.57
CASP4-213ENST00000534356 POLIQ9UNA4 740 aa11.49□□□□□ -0.57
CASP4-213ENST00000534356 EPB42P16452 691 aa11.48□□□□□ -0.57
CASP4-213ENST00000534356 MZF1P28698 734 aaPredicted RBP11.48□□□□□ -0.57
CASP4-213ENST00000534356 LCE2CQ5TA81 110 aa11.48□□□□□ -0.57
CASP4-213ENST00000534356 CMTR1Q8N1G2 835 aaKnown RBP11.48□□□□□ -0.57
CASP4-213ENST00000534356 PIK3R5Q8WYR1 880 aa11.48□□□□□ -0.57
CASP4-213ENST00000534356 IRF7Q92985 503 aa11.48□□□□□ -0.57
CASP4-213ENST00000534356 NUDT16Q96DE0 195 aaKnown RBP11.48□□□□□ -0.57
CASP4-213ENST00000534356 PDGFAP04085 211 aa11.47□□□□□ -0.57
CASP4-213ENST00000534356 COL25A1Q9BXS0 654 aaPredicted RBP11.47□□□□□ -0.57
CASP4-213ENST00000534356 BRPF3Q9ULD4 1205 aa11.47□□□□□ -0.57
CASP4-213ENST00000534356 KCNMB2Q9Y691 235 aa11.47□□□□□ -0.57
CASP4-213ENST00000534356 RNFT1Q5M7Z0 435 aa11.46□□□□□ -0.57
CASP4-213ENST00000534356 C2CD2LO14523 706 aa11.45□□□□□ -0.58
CASP4-213ENST00000534356 TRIP4Q15650 581 aaPredicted RBP11.45□□□□□ -0.58
CASP4-213ENST00000534356 SLC30A3Q99726 388 aa11.45□□□□□ -0.58
CASP4-213ENST00000534356 WFS1O76024 890 aa11.44□□□□□ -0.58
CASP4-213ENST00000534356 FAM182BQ5T319 152 aa11.44□□□□□ -0.58
CASP4-213ENST00000534356 GGNBP2Q9H3C7 697 aa11.44□□□□□ -0.58
CASP4-213ENST00000534356 DCTN4Q9UJW0 460 aa11.44□□□□□ -0.58
CASP4-213ENST00000534356 NDUFB5O43674 189 aa11.43□□□□□ -0.58
CASP4-213ENST00000534356 MX2P20592 715 aa11.43□□□□□ -0.58
CASP4-213ENST00000534356 MARSP56192 900 aaKnown RBP11.43□□□□□ -0.58
CASP4-213ENST00000534356 KRT76Q01546 638 aa11.43□□□□□ -0.58
CASP4-213ENST00000534356 SPEM2Q0P670 501 aa11.43□□□□□ -0.58
CASP4-213ENST00000534356 TMCO4Q5TGY1 634 aa11.43□□□□□ -0.58
CASP4-213ENST00000534356 GSX2Q9BZM3 304 aa11.43□□□□□ -0.58
CASP4-213ENST00000534356 A6NHS1 94 aa11.42□□□□□ -0.58
CASP4-213ENST00000534356 XYLBO75191 536 aa11.42□□□□□ -0.58
CASP4-213ENST00000534356 MAPK1P28482 360 aa11.42□□□□□ -0.58
CASP4-213ENST00000534356 C11orf16Q9NQ32 467 aa11.42□□□□□ -0.58
CASP4-213ENST00000534356 MBIPQ9NS73 344 aa11.42□□□□□ -0.58
CASP4-213ENST00000534356 UBAP1LF5GYI3 381 aa11.41□□□□□ -0.58
CASP4-213ENST00000534356 EGFRP00533 1210 aa11.41□□□□□ -0.58
CASP4-213ENST00000534356 BMP4P12644 408 aa11.41□□□□□ -0.58
CASP4-213ENST00000534356 PCSK2P16519 638 aa11.41□□□□□ -0.58
CASP4-213ENST00000534356 CCINQ13939 588 aa11.41□□□□□ -0.58
CASP4-213ENST00000534356 CCDC27Q2M243 656 aa11.41□□□□□ -0.58
CASP4-213ENST00000534356 C8orf34Q49A92 452 aa11.41□□□□□ -0.58
CASP4-213ENST00000534356 RAB44Q7Z6P3 723 aaPredicted RBP11.41□□□□□ -0.58
CASP4-213ENST00000534356 GJD3Q8N144 294 aa11.41□□□□□ -0.58
CASP4-213ENST00000534356 SASH3O75995 380 aa11.4□□□□□ -0.58
CASP4-213ENST00000534356 GMPRP36959 345 aa11.4□□□□□ -0.58
CASP4-213ENST00000534356 USP5P45974 858 aa11.4□□□□□ -0.58
CASP4-213ENST00000534356 TREML4Q6UXN2 200 aa11.4□□□□□ -0.58
CASP4-213ENST00000534356 CNTNAP3BQ96NU0 1288 aa11.4□□□□□ -0.58
CASP4-213ENST00000534356 RBCK1Q9BYM8 510 aa11.4□□□□□ -0.58
CASP4-213ENST00000534356 CNTNAP3Q9BZ76 1288 aa11.4□□□□□ -0.58
CASP4-213ENST00000534356 FNDC3AQ9Y2H6 1198 aaKnown RBP11.4□□□□□ -0.58
CASP4-213ENST00000534356 RPLP1P05386 114 aaKnown RBP11.39□□□□□ -0.59
CASP4-213ENST00000534356 TARSP26639 723 aaKnown RBP11.39□□□□□ -0.59
CASP4-213ENST00000534356 KRT25Q7Z3Z0 450 aa11.39□□□□□ -0.59
CASP4-213ENST00000534356 TTC16Q8NEE8 873 aa11.38□□□□□ -0.59
CASP4-213ENST00000534356 BHMTQ93088 406 aa11.38□□□□□ -0.59
CASP4-213ENST00000534356 CITED4Q96RK1 184 aa11.38□□□□□ -0.59
CASP4-213ENST00000534356 PRR12Q9ULL5 1215 aa11.38□□□□□ -0.59
CASP4-213ENST00000534356 IGF1RP08069 1367 aa11.38□□□□□ -0.59
CASP4-213ENST00000534356 LCE2AQ5TA79 106 aaPredicted RBP11.37□□□□□ -0.59
CASP4-213ENST00000534356 TMC7Q7Z402 723 aa11.37□□□□□ -0.59
CASP4-213ENST00000534356 TMC1Q8TDI8 760 aa11.37□□□□□ -0.59
CASP4-213ENST00000534356 FAM129BQ96TA1 746 aa11.37□□□□□ -0.59
CASP4-213ENST00000534356 ZFATQ9P243 1243 aa11.37□□□□□ -0.59
CASP4-213ENST00000534356 IGHA2P01877 340 aa11.36□□□□□ -0.59
CASP4-213ENST00000534356 NFKB1P19838 968 aa11.36□□□□□ -0.59
CASP4-213ENST00000534356 NLRP13Q86W25 1043 aa11.36□□□□□ -0.59
CASP4-213ENST00000534356 PNMA5Q96PV4 448 aa11.36□□□□□ -0.59
CASP4-213ENST00000534356 PODXL2Q9NZ53 605 aa11.36□□□□□ -0.59
CASP4-213ENST00000534356 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.36□□□□□ -0.59
CASP4-213ENST00000534356 MAP2K3P46734 347 aa11.35□□□□□ -0.59
CASP4-213ENST00000534356 MFAP1P55081 439 aaKnown RBP11.35□□□□□ -0.59
CASP4-213ENST00000534356 SRSF11Q05519 484 aaKnown RBP11.35□□□□□ -0.59
CASP4-213ENST00000534356 EHHADHQ08426 723 aa11.35□□□□□ -0.59
CASP4-213ENST00000534356 PDE3BQ13370 1112 aa11.35□□□□□ -0.59
CASP4-213ENST00000534356 ZNF468Q5VIY5 522 aaPredicted RBP11.35□□□□□ -0.59
CASP4-213ENST00000534356 PDE12Q6L8Q7 609 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms