RNA–Protein interactions for RNA: ENST00000533905.1

CLP1-206, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 4

Gene CLP1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-206ENST00000533905 TSPYL4Q9UJ04 414 aa13.57□□□□□ -0.24
CLP1-206ENST00000533905 DUOX1Q9NRD9 1551 aa13.57□□□□□ -0.24
CLP1-206ENST00000533905 ERVV-1B6SEH8 477 aa13.56□□□□□ -0.24
CLP1-206ENST00000533905 EAPPQ56P03 285 aaPredicted RBP13.56□□□□□ -0.24
CLP1-206ENST00000533905 MAP1SQ66K74 1059 aaPredicted RBP13.56□□□□□ -0.24
CLP1-206ENST00000533905 TRIM35Q9UPQ4 493 aa13.56□□□□□ -0.24
CLP1-206ENST00000533905 TMPOP42166 694 aaKnown RBP13.55□□□□□ -0.24
CLP1-206ENST00000533905 SCNN1DP51172 638 aa13.55□□□□□ -0.24
CLP1-206ENST00000533905 RIPK4P57078 832 aa13.55□□□□□ -0.24
CLP1-206ENST00000533905 GIGYF2Q6Y7W6 1299 aaKnown RBP13.55□□□□□ -0.24
CLP1-206ENST00000533905 ABCC4O15439 1325 aa13.55□□□□□ -0.24
CLP1-206ENST00000533905 TAF1P21675 1872 aa13.55□□□□□ -0.24
CLP1-206ENST00000533905 SHTN1A0MZ66 631 aa13.54□□□□□ -0.24
CLP1-206ENST00000533905 RGL2O15211 777 aa13.54□□□□□ -0.24
CLP1-206ENST00000533905 HCLS1P14317 486 aaPredicted RBP13.54□□□□□ -0.24
CLP1-206ENST00000533905 HOXA10P31260 410 aaPredicted RBP13.54□□□□□ -0.24
CLP1-206ENST00000533905 DDX10Q13206 875 aaKnown RBP13.54□□□□□ -0.24
CLP1-206ENST00000533905 NEUROD2Q15784 382 aa13.54□□□□□ -0.24
CLP1-206ENST00000533905 XAGE3Q8WTP9 111 aa13.54□□□□□ -0.24
CLP1-206ENST00000533905 SCN4AP35499 1836 aa13.54□□□□□ -0.24
CLP1-206ENST00000533905 CNTNAP1P78357 1384 aa13.54□□□□□ -0.24
CLP1-206ENST00000533905 IBTKQ9P2D0 1353 aaPredicted RBP13.54□□□□□ -0.24
CLP1-206ENST00000533905 ANKRD36CQ5JPF3 1778 aa13.53□□□□□ -0.24
CLP1-206ENST00000533905 PPEF1O14829 653 aaPredicted RBP13.53□□□□□ -0.24
CLP1-206ENST00000533905 FOXN1O15353 648 aa13.53□□□□□ -0.24
CLP1-206ENST00000533905 GTF2E1P29083 439 aaPredicted RBP13.53□□□□□ -0.24
CLP1-206ENST00000533905 EPHX2P34913 555 aa13.53□□□□□ -0.24
CLP1-206ENST00000533905 EPS15P42566 896 aa13.53□□□□□ -0.24
CLP1-206ENST00000533905 AIMP1Q12904 312 aaKnown RBP13.53□□□□□ -0.24
CLP1-206ENST00000533905 KIF6Q6ZMV9 814 aa13.53□□□□□ -0.24
CLP1-206ENST00000533905 LDHDQ86WU2 507 aa13.53□□□□□ -0.24
CLP1-206ENST00000533905 PNISRQ8TF01 805 aaKnown RBP13.53□□□□□ -0.24
CLP1-206ENST00000533905 PSMD1Q99460 953 aa13.53□□□□□ -0.24
CLP1-206ENST00000533905 CREBZFQ9NS37 354 aa13.53□□□□□ -0.24
CLP1-206ENST00000533905 GJA3Q9Y6H8 435 aa13.53□□□□□ -0.24
CLP1-206ENST00000533905 MAPK8IP3Q9UPT6 1336 aa13.53□□□□□ -0.24
CLP1-206ENST00000533905 TRAF5O00463 557 aa13.52□□□□□ -0.25
CLP1-206ENST00000533905 VEGFBP49765 207 aa13.52□□□□□ -0.25
CLP1-206ENST00000533905 AOC3Q16853 763 aa13.52□□□□□ -0.25
CLP1-206ENST00000533905 SOGA3Q5TF21 947 aa13.52□□□□□ -0.25
CLP1-206ENST00000533905 DLK2Q6UY11 383 aa13.52□□□□□ -0.25
CLP1-206ENST00000533905 COPS6Q7L5N1 327 aa13.52□□□□□ -0.25
CLP1-206ENST00000533905 HACL1Q9UJ83 578 aa13.52□□□□□ -0.25
CLP1-206ENST00000533905 DDX60Q8IY21 1712 aaKnown RBP13.52□□□□□ -0.25
CLP1-206ENST00000533905 NLRP10Q86W26 655 aa13.51□□□□□ -0.25
CLP1-206ENST00000533905 RTKN2Q8IZC4 609 aa13.51□□□□□ -0.25
CLP1-206ENST00000533905 CHPF2Q9P2E5 772 aa13.51□□□□□ -0.25
CLP1-206ENST00000533905 ZNF316A6NFI3 1004 aaPredicted RBP13.5□□□□□ -0.25
CLP1-206ENST00000533905 ALDH1B1P30837 517 aa13.5□□□□□ -0.25
CLP1-206ENST00000533905 TNS4Q8IZW8 715 aa13.5□□□□□ -0.25
CLP1-206ENST00000533905 RPGRQ92834 1020 aaKnown RBP13.5□□□□□ -0.25
CLP1-206ENST00000533905 GPR101Q96P66 508 aaPredicted RBP13.5□□□□□ -0.25
CLP1-206ENST00000533905 NYXQ9GZU5 481 aa13.5□□□□□ -0.25
CLP1-206ENST00000533905 ERBB4Q15303 1308 aa13.49□□□□□ -0.25
CLP1-206ENST00000533905 CHL1O00533 1208 aa13.49□□□□□ -0.25
CLP1-206ENST00000533905 CRAMP1Q96RY5 1269 aa13.49□□□□□ -0.25
CLP1-206ENST00000533905 ADAMTS8Q9UP79 889 aa13.49□□□□□ -0.25
CLP1-206ENST00000533905 LAS1LQ9Y4W2 734 aaKnown RBP13.49□□□□□ -0.25
CLP1-206ENST00000533905 LRRC37AA6NMS7 1700 aa13.48□□□□□ -0.25
CLP1-206ENST00000533905 MYBBP1AQ9BQG0 1328 aaKnown RBP13.48□□□□□ -0.25
CLP1-206ENST00000533905 IQCA1LA6NCM1 817 aa13.48□□□□□ -0.25
CLP1-206ENST00000533905 YDJCA8MPS7 323 aa13.48□□□□□ -0.25
CLP1-206ENST00000533905 CCDC184Q52MB2 194 aa13.48□□□□□ -0.25
CLP1-206ENST00000533905 CNTROBQ8N137 903 aa13.48□□□□□ -0.25
CLP1-206ENST00000533905 GPC2Q8N158 579 aa13.48□□□□□ -0.25
CLP1-206ENST00000533905 LARGE2Q8N3Y3 721 aa13.48□□□□□ -0.25
CLP1-206ENST00000533905 UTP14AQ9BVJ6 771 aaKnown RBP13.48□□□□□ -0.25
CLP1-206ENST00000533905 CLEC11AQ9Y240 323 aa13.48□□□□□ -0.25
CLP1-206ENST00000533905 ATP5J2-PTCD1G3V325 749 aa13.47□□□□□ -0.25
CLP1-206ENST00000533905 PPIP5K2O43314 1243 aa13.47□□□□□ -0.25
CLP1-206ENST00000533905 HIRAP54198 1017 aaPredicted RBP13.47□□□□□ -0.25
CLP1-206ENST00000533905 RTL5Q5HYW3 569 aaPredicted RBP13.47□□□□□ -0.25
CLP1-206ENST00000533905 SLC10A5Q5PT55 438 aa13.47□□□□□ -0.25
CLP1-206ENST00000533905 TRPM4Q8TD43 1214 aa13.47□□□□□ -0.25
CLP1-206ENST00000533905 RBM17Q96I25 401 aaKnown RBP13.47□□□□□ -0.25
CLP1-206ENST00000533905 ATP6V0A2Q9Y487 856 aa13.47□□□□□ -0.25
CLP1-206ENST00000533905 THSD7BQ9C0I4 1608 aa13.46□□□□□ -0.25
CLP1-206ENST00000533905 TMEM88BA6NKF7 163 aa13.46□□□□□ -0.25
CLP1-206ENST00000533905 EGFRP00533 1210 aa13.46□□□□□ -0.25
CLP1-206ENST00000533905 NEFMP07197 916 aa13.46□□□□□ -0.25
CLP1-206ENST00000533905 CXCL9Q07325 125 aa13.46□□□□□ -0.25
CLP1-206ENST00000533905 RALBP1Q15311 655 aa13.46□□□□□ -0.25
CLP1-206ENST00000533905 CST9Q5W186 159 aa13.46□□□□□ -0.25
CLP1-206ENST00000533905 JARID2Q92833 1246 aaPredicted RBP13.46□□□□□ -0.25
CLP1-206ENST00000533905 CELF1Q92879 486 aaKnown RBP13.46□□□□□ -0.25
CLP1-206ENST00000533905 KCNQ5Q9NR82 932 aa13.46□□□□□ -0.25
CLP1-206ENST00000533905 RAD17O75943 681 aa13.45□□□□□ -0.26
CLP1-206ENST00000533905 GMPSP49915 693 aaPredicted RBP13.45□□□□□ -0.26
CLP1-206ENST00000533905 TCIRG1Q13488 830 aa13.45□□□□□ -0.26
CLP1-206ENST00000533905 PARP10Q53GL7 1025 aa13.45□□□□□ -0.26
CLP1-206ENST00000533905 FAM89AQ96GI7 184 aa13.45□□□□□ -0.26
CLP1-206ENST00000533905 PHAXQ9H814 394 aaKnown RBP13.45□□□□□ -0.26
CLP1-206ENST00000533905 DDX21Q9NR30 783 aaKnown RBP eCLIP13.45□□□□□ -0.26
CLP1-206ENST00000533905 MBIPQ9NS73 344 aa13.45□□□□□ -0.26
CLP1-206ENST00000533905 WTIPA6NIX2 430 aaPredicted RBP13.44□□□□□ -0.26
CLP1-206ENST00000533905 RASSF10A6NK89 507 aa13.44□□□□□ -0.26
CLP1-206ENST00000533905 HDGFL1Q5TGJ6 251 aa13.44□□□□□ -0.26
CLP1-206ENST00000533905 PPP1R42Q7Z4L9 355 aa13.44□□□□□ -0.26
CLP1-206ENST00000533905 JDP2Q8WYK2 163 aa13.44□□□□□ -0.26
CLP1-206ENST00000533905 NLRP3Q96P20 1036 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms