RNA–Protein interactions for RNA: ENST00000533834.1

RNPC3-209, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 1 (best)

Gene RNPC3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-209ENST00000533834 NBPF10Q6P3W6 841 aaKnown RBP8.74□□□□□ -1.01
RNPC3-209ENST00000533834 NBPF15Q8N660 670 aa8.74□□□□□ -1.01
RNPC3-209ENST00000533834 DDX17Q92841 729 aaKnown RBP8.74□□□□□ -1.01
RNPC3-209ENST00000533834 MYH14Q7Z406 1995 aaKnown RBP8.74□□□□□ -1.01
RNPC3-209ENST00000533834 ADCK5Q3MIX3 580 aa8.74□□□□□ -1.01
RNPC3-209ENST00000533834 ZSCAN23Q3MJ62 389 aa8.74□□□□□ -1.01
RNPC3-209ENST00000533834 BICC1Q9H694 974 aaKnown RBP8.74□□□□□ -1.01
RNPC3-209ENST00000533834 IL1RAPL2Q9NP60 686 aa8.74□□□□□ -1.01
RNPC3-209ENST00000533834 DAXXQ9UER7 740 aaPredicted RBP8.74□□□□□ -1.01
RNPC3-209ENST00000533834 CLCN1P35523 988 aa8.74□□□□□ -1.01
RNPC3-209ENST00000533834 PSME1Q06323 249 aa8.74□□□□□ -1.01
RNPC3-209ENST00000533834 SKOR2Q2VWA4 1001 aaPredicted RBP8.74□□□□□ -1.01
RNPC3-209ENST00000533834 L1TD1Q5T7N2 865 aaKnown RBP8.74□□□□□ -1.01
RNPC3-209ENST00000533834 MAP4K1Q92918 833 aa8.74□□□□□ -1.01
RNPC3-209ENST00000533834 LTV1Q96GA3 475 aaPredicted RBP8.74□□□□□ -1.01
RNPC3-209ENST00000533834 TM6SF1Q9BZW5 370 aa8.74□□□□□ -1.01
RNPC3-209ENST00000533834 RIC1Q4ADV7 1423 aa8.74□□□□□ -1.01
RNPC3-209ENST00000533834 XPCQ01831 940 aaPredicted RBP8.73□□□□□ -1.01
RNPC3-209ENST00000533834 PTPN12Q05209 780 aaKnown RBP8.73□□□□□ -1.01
RNPC3-209ENST00000533834 GCKRQ14397 625 aa8.73□□□□□ -1.01
RNPC3-209ENST00000533834 COPRSQ9NQ92 184 aa8.73□□□□□ -1.01
RNPC3-209ENST00000533834 LTBP4Q8N2S1 1624 aa8.73□□□□□ -1.01
RNPC3-209ENST00000533834 GOLGA6L3A6NEY3 463 aa8.73□□□□□ -1.01
RNPC3-209ENST00000533834 GRM8O00222 908 aa8.73□□□□□ -1.01
RNPC3-209ENST00000533834 SRGAP3O43295 1099 aa8.73□□□□□ -1.01
RNPC3-209ENST00000533834 HSP90AB1P08238 724 aaKnown RBP8.73□□□□□ -1.01
RNPC3-209ENST00000533834 NUCB2P80303 420 aa8.73□□□□□ -1.01
RNPC3-209ENST00000533834 ZNF496Q96IT1 587 aaPredicted RBP8.73□□□□□ -1.01
RNPC3-209ENST00000533834 METTL22Q9BUU2 404 aaPredicted RBP8.73□□□□□ -1.01
RNPC3-209ENST00000533834 RBSNQ9H1K0 784 aa8.73□□□□□ -1.01
RNPC3-209ENST00000533834 PA2G4Q9UQ80 394 aaKnown RBP8.73□□□□□ -1.01
RNPC3-209ENST00000533834 ATG9AQ7Z3C6 839 aa8.72□□□□□ -1.01
RNPC3-209ENST00000533834 FOXD4L1Q9NU39 408 aa8.72□□□□□ -1.01
RNPC3-209ENST00000533834 MCM2P49736 904 aa8.72□□□□□ -1.01
RNPC3-209ENST00000533834 BRINP3Q76B58 766 aa8.72□□□□□ -1.01
RNPC3-209ENST00000533834 KLHL34Q8N239 644 aa8.72□□□□□ -1.01
RNPC3-209ENST00000533834 USP16Q9Y5T5 823 aa8.72□□□□□ -1.01
RNPC3-209ENST00000533834 PTMSP20962 102 aa8.71□□□□□ -1.01
RNPC3-209ENST00000533834 TAF1LQ8IZX4 1826 aa8.71□□□□□ -1.02
RNPC3-209ENST00000533834 H7C1W4 665 aa8.71□□□□□ -1.02
RNPC3-209ENST00000533834 AK2P54819 239 aa8.71□□□□□ -1.02
RNPC3-209ENST00000533834 TOB2Q14106 344 aaPredicted RBP8.71□□□□□ -1.02
RNPC3-209ENST00000533834 GBP4Q96PP9 640 aa8.71□□□□□ -1.02
RNPC3-209ENST00000533834 AGXT2Q9BYV1 514 aa8.71□□□□□ -1.02
RNPC3-209ENST00000533834 ATRNO75882 1429 aa8.71□□□□□ -1.02
RNPC3-209ENST00000533834 LAMB1P07942 1786 aa8.7□□□□□ -1.02
RNPC3-209ENST00000533834 WDR17Q8IZU2 1322 aa8.7□□□□□ -1.02
RNPC3-209ENST00000533834 APBB1O00213 710 aa8.7□□□□□ -1.02
RNPC3-209ENST00000533834 CHGBP05060 677 aa8.7□□□□□ -1.02
RNPC3-209ENST00000533834 SALL1Q9NSC2 1324 aa8.7□□□□□ -1.02
RNPC3-209ENST00000533834 ZNF646O15015 1829 aaPredicted RBP8.7□□□□□ -1.02
RNPC3-209ENST00000533834 CACNA1SQ13698 1873 aa8.7□□□□□ -1.02
RNPC3-209ENST00000533834 LY75O60449 1722 aa8.7□□□□□ -1.02
RNPC3-209ENST00000533834 A0A0D9SFI3 127 aa8.7□□□□□ -1.02
RNPC3-209ENST00000533834 ZNF589Q86UQ0 364 aaPredicted RBP8.7□□□□□ -1.02
RNPC3-209ENST00000533834 NFATC2IPQ8NCF5 419 aa8.7□□□□□ -1.02
RNPC3-209ENST00000533834 DBNLQ9UJU6 430 aaKnown RBP8.7□□□□□ -1.02
RNPC3-209ENST00000533834 CCDC171Q6TFL3 1326 aa8.7□□□□□ -1.02
RNPC3-209ENST00000533834 DDX60LQ5H9U9 1706 aaKnown RBP8.7□□□□□ -1.02
RNPC3-209ENST00000533834 NPM3O75607 178 aaKnown RBP8.69□□□□□ -1.02
RNPC3-209ENST00000533834 SURF6O75683 361 aaKnown RBP8.69□□□□□ -1.02
RNPC3-209ENST00000533834 SLC39A6Q13433 755 aa8.69□□□□□ -1.02
RNPC3-209ENST00000533834 DCAF5Q96JK2 942 aa8.69□□□□□ -1.02
RNPC3-209ENST00000533834 ST18O60284 1047 aa8.69□□□□□ -1.02
RNPC3-209ENST00000533834 GADD45BO75293 160 aaPredicted RBP8.69□□□□□ -1.02
RNPC3-209ENST00000533834 PRIM1P49642 420 aaKnown RBP8.69□□□□□ -1.02
RNPC3-209ENST00000533834 NEK4P51957 841 aa8.69□□□□□ -1.02
RNPC3-209ENST00000533834 VPS53Q5VIR6 699 aa8.69□□□□□ -1.02
RNPC3-209ENST00000533834 ECHDC1Q9NTX5 307 aa8.69□□□□□ -1.02
RNPC3-209ENST00000533834 MAST2Q6P0Q8 1798 aa8.69□□□□□ -1.02
RNPC3-209ENST00000533834 GLRX3O76003 335 aaKnown RBP8.69□□□□□ -1.02
RNPC3-209ENST00000533834 FAM227BQ96M60 508 aa8.69□□□□□ -1.02
RNPC3-209ENST00000533834 RBM27Q9P2N5 1060 aaKnown RBP8.69□□□□□ -1.02
RNPC3-209ENST00000533834 CDK5RAP2Q96SN8 1893 aa8.68□□□□□ -1.02
RNPC3-209ENST00000533834 MAP4K4O95819 1239 aaPredicted RBP8.68□□□□□ -1.02
RNPC3-209ENST00000533834 TICAM2Q86XR7 235 aa8.68□□□□□ -1.02
RNPC3-209ENST00000533834 FBXL16Q8N461 479 aa8.68□□□□□ -1.02
RNPC3-209ENST00000533834 GZF1Q9H116 711 aaPredicted RBP8.68□□□□□ -1.02
RNPC3-209ENST00000533834 EIF2S2P20042 333 aaKnown RBP8.68□□□□□ -1.02
RNPC3-209ENST00000533834 MTMR6Q9Y217 621 aa8.68□□□□□ -1.02
RNPC3-209ENST00000533834 ATP5JP18859 108 aa8.68□□□□□ -1.02
RNPC3-209ENST00000533834 LRSAM1Q6UWE0 723 aa8.68□□□□□ -1.02
RNPC3-209ENST00000533834 RBM43Q6ZSC3 357 aaKnown RBP8.68□□□□□ -1.02
RNPC3-209ENST00000533834 KLHDC4Q8TBB5 520 aa8.68□□□□□ -1.02
RNPC3-209ENST00000533834 TPCN1Q9ULQ1 816 aa8.68□□□□□ -1.02
RNPC3-209ENST00000533834 NEDD4P46934 1319 aa8.68□□□□□ -1.02
RNPC3-209ENST00000533834 BCL9O00512 1426 aa8.68□□□□□ -1.02
RNPC3-209ENST00000533834 THSD7AQ9UPZ6 1657 aa8.68□□□□□ -1.02
RNPC3-209ENST00000533834 AP5Z1O43299 807 aa8.67□□□□□ -1.02
RNPC3-209ENST00000533834 TAF5LO75529 589 aa8.67□□□□□ -1.02
RNPC3-209ENST00000533834 CPA1P15085 419 aa8.67□□□□□ -1.02
RNPC3-209ENST00000533834 ME3Q16798 604 aa8.67□□□□□ -1.02
RNPC3-209ENST00000533834 MCTP1Q6DN14 999 aa8.67□□□□□ -1.02
RNPC3-209ENST00000533834 EVI5LQ96CN4 794 aa8.67□□□□□ -1.02
RNPC3-209ENST00000533834 SLC27A2O14975 620 aa8.67□□□□□ -1.02
RNPC3-209ENST00000533834 SH3TC1Q8TE82 1336 aa8.67□□□□□ -1.02
RNPC3-209ENST00000533834 XAGE3Q8WTP9 111 aa8.67□□□□□ -1.02
RNPC3-209ENST00000533834 UPF3BQ9BZI7 483 aaKnown RBP8.67□□□□□ -1.02
RNPC3-209ENST00000533834 ADD1P35611 737 aaKnown RBP8.67□□□□□ -1.02
RNPC3-209ENST00000533834 EVX2Q03828 476 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms