RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 CC2D2BQ6DHV5 1058 aa14.62□□□□□ -0.07
CSDE1-215ENST00000533818 REM2Q8IYK8 340 aaPredicted RBP14.62□□□□□ -0.07
CSDE1-215ENST00000533818 LGR6Q9HBX8 967 aa14.62□□□□□ -0.07
CSDE1-215ENST00000533818 ANKRD26Q9UPS8 1709 aa14.62□□□□□ -0.07
CSDE1-215ENST00000533818 SZT2Q5T011 3432 aa14.62□□□□□ -0.07
CSDE1-215ENST00000533818 BCORQ6W2J9 1755 aa14.61□□□□□ -0.07
CSDE1-215ENST00000533818 CARD14Q9BXL6 1004 aa14.61□□□□□ -0.07
CSDE1-215ENST00000533818 TBC1D8O95759 1140 aa14.6□□□□□ -0.07
CSDE1-215ENST00000533818 SLC10A3P09131 477 aa14.6□□□□□ -0.07
CSDE1-215ENST00000533818 IL6STP40189 918 aaPredicted RBP14.6□□□□□ -0.07
CSDE1-215ENST00000533818 TPTE2Q6XPS3 522 aa14.6□□□□□ -0.07
CSDE1-215ENST00000533818 AEBP1Q8IUX7 1158 aa14.6□□□□□ -0.07
CSDE1-215ENST00000533818 TRIOBPQ9H2D6 2365 aa14.6□□□□□ -0.07
CSDE1-215ENST00000533818 KIF20BQ96Q89 1820 aa14.59□□□□□ -0.07
CSDE1-215ENST00000533818 SNED1Q8TER0 1413 aa14.59□□□□□ -0.07
CSDE1-215ENST00000533818 CXCL9Q07325 125 aa14.59□□□□□ -0.07
CSDE1-215ENST00000533818 TRPM4Q8TD43 1214 aa14.59□□□□□ -0.07
CSDE1-215ENST00000533818 NPC1L1Q9UHC9 1359 aa14.59□□□□□ -0.07
CSDE1-215ENST00000533818 SCN11AQ9UI33 1791 aa14.58□□□□□ -0.08
CSDE1-215ENST00000533818 TNNT2P45379 298 aaPredicted RBP14.58□□□□□ -0.08
CSDE1-215ENST00000533818 MNX1P50219 401 aaPredicted RBP14.58□□□□□ -0.08
CSDE1-215ENST00000533818 GRIPAP1Q4V328 841 aa14.58□□□□□ -0.08
CSDE1-215ENST00000533818 INTS3Q68E01 1043 aaKnown RBP14.58□□□□□ -0.08
CSDE1-215ENST00000533818 BCL2L13Q9BXK5 485 aa14.58□□□□□ -0.08
CSDE1-215ENST00000533818 PITPNM2Q9BZ72 1349 aa14.58□□□□□ -0.08
CSDE1-215ENST00000533818 AKAP11Q9UKA4 1901 aa14.57□□□□□ -0.08
CSDE1-215ENST00000533818 RNMTO43148 476 aaKnown RBP14.57□□□□□ -0.08
CSDE1-215ENST00000533818 PPIP5K2O43314 1243 aa14.57□□□□□ -0.08
CSDE1-215ENST00000533818 KRT26Q7Z3Y9 468 aa14.57□□□□□ -0.08
CSDE1-215ENST00000533818 DZIP3Q86Y13 1208 aaKnown RBP14.57□□□□□ -0.08
CSDE1-215ENST00000533818 SCN7AQ01118 1682 aa14.57□□□□□ -0.08
CSDE1-215ENST00000533818 GPR25O00155 361 aa14.56□□□□□ -0.08
CSDE1-215ENST00000533818 TTC5Q8N0Z6 440 aa14.56□□□□□ -0.08
CSDE1-215ENST00000533818 OTUD5Q96G74 571 aa14.56□□□□□ -0.08
CSDE1-215ENST00000533818 TEX13AQ9BXU3 409 aaPredicted RBP14.56□□□□□ -0.08
CSDE1-215ENST00000533818 ZNRF3Q9ULT6 936 aa14.56□□□□□ -0.08
CSDE1-215ENST00000533818 FAM177BA6PVY3 158 aa14.55□□□□□ -0.08
CSDE1-215ENST00000533818 A1BGP04217 495 aa14.55□□□□□ -0.08
CSDE1-215ENST00000533818 AOC3Q16853 763 aa14.55□□□□□ -0.08
CSDE1-215ENST00000533818 CLEC4GQ6UXB4 293 aa14.55□□□□□ -0.08
CSDE1-215ENST00000533818 CNOT7Q9UIV1 285 aaKnown RBP14.55□□□□□ -0.08
CSDE1-215ENST00000533818 CDHR2Q9BYE9 1310 aa14.55□□□□□ -0.08
CSDE1-215ENST00000533818 H7C1D1 291 aa14.54□□□□□ -0.08
CSDE1-215ENST00000533818 EN2P19622 333 aaPredicted RBP14.54□□□□□ -0.08
CSDE1-215ENST00000533818 GTF2E1P29083 439 aaPredicted RBP14.54□□□□□ -0.08
CSDE1-215ENST00000533818 SULT6B1Q6IMI4 303 aa14.54□□□□□ -0.08
CSDE1-215ENST00000533818 COL6A3P12111 3177 aa14.54□□□□□ -0.08
CSDE1-215ENST00000533818 H0YGN5 161 aa14.53□□□□□ -0.08
CSDE1-215ENST00000533818 TCERG1O14776 1098 aaKnown RBP14.53□□□□□ -0.08
CSDE1-215ENST00000533818 FKTNO75072 461 aa14.53□□□□□ -0.08
CSDE1-215ENST00000533818 TNIP1Q15025 636 aa14.53□□□□□ -0.08
CSDE1-215ENST00000533818 NOM1Q5C9Z4 860 aaKnown RBP14.53□□□□□ -0.08
CSDE1-215ENST00000533818 RASAL3Q86YV0 1011 aa14.53□□□□□ -0.08
CSDE1-215ENST00000533818 ZNF496Q96IT1 587 aaPredicted RBP14.53□□□□□ -0.08
CSDE1-215ENST00000533818 ZNF652Q9Y2D9 606 aa14.53□□□□□ -0.08
CSDE1-215ENST00000533818 SHTN1A0MZ66 631 aa14.52□□□□□ -0.09
CSDE1-215ENST00000533818 ADM5C9JUS6 153 aa14.52□□□□□ -0.09
CSDE1-215ENST00000533818 RAD17O75943 681 aa14.52□□□□□ -0.09
CSDE1-215ENST00000533818 CRY2Q49AN0 593 aa14.52□□□□□ -0.09
CSDE1-215ENST00000533818 DCPSQ96C86 337 aaKnown RBP14.52□□□□□ -0.09
CSDE1-215ENST00000533818 VPS33BQ9H267 617 aa14.52□□□□□ -0.09
CSDE1-215ENST00000533818 NIP7Q9Y221 180 aaKnown RBP eCLIP14.52□□□□□ -0.09
CSDE1-215ENST00000533818 CHRDL2Q6WN34 429 aa14.51□□□□□ -0.09
CSDE1-215ENST00000533818 RPGRQ92834 1020 aaKnown RBP14.51□□□□□ -0.09
CSDE1-215ENST00000533818 MRC1P22897 1456 aa14.5□□□□□ -0.09
CSDE1-215ENST00000533818 CEP290O15078 2479 aa14.5□□□□□ -0.09
CSDE1-215ENST00000533818 SAMD7Q7Z3H4 446 aa14.5□□□□□ -0.09
CSDE1-215ENST00000533818 SLC51AQ86UW1 340 aa14.5□□□□□ -0.09
CSDE1-215ENST00000533818 MICALL2Q8IY33 904 aa14.5□□□□□ -0.09
CSDE1-215ENST00000533818 HEG1Q9ULI3 1381 aa14.49□□□□□ -0.09
CSDE1-215ENST00000533818 PPEF1O14829 653 aaPredicted RBP14.49□□□□□ -0.09
CSDE1-215ENST00000533818 TMX4Q9H1E5 349 aaPredicted RBP14.49□□□□□ -0.09
CSDE1-215ENST00000533818 RBM27Q9P2N5 1060 aaKnown RBP14.49□□□□□ -0.09
CSDE1-215ENST00000533818 HOXA10P31260 410 aaPredicted RBP14.48□□□□□ -0.09
CSDE1-215ENST00000533818 TBC1D10BQ4KMP7 808 aaPredicted RBP14.48□□□□□ -0.09
CSDE1-215ENST00000533818 CDCA8Q53HL2 280 aa14.48□□□□□ -0.09
CSDE1-215ENST00000533818 TRIM17Q9Y577 477 aa14.48□□□□□ -0.09
CSDE1-215ENST00000533818 TM4SF4P48230 202 aa14.47□□□□□ -0.09
CSDE1-215ENST00000533818 PIP4K2AP48426 406 aaPredicted RBP14.47□□□□□ -0.09
CSDE1-215ENST00000533818 ZNF790Q6PG37 636 aa14.47□□□□□ -0.09
CSDE1-215ENST00000533818 SUPT20HQ8NEM7 779 aa14.47□□□□□ -0.09
CSDE1-215ENST00000533818 HTTP42858 3142 aa14.46□□□□□ -0.09
CSDE1-215ENST00000533818 KIAA0100Q14667 2235 aaKnown RBP14.46□□□□□ -0.09
CSDE1-215ENST00000533818 RBM26Q5T8P6 1007 aaKnown RBP14.46□□□□□ -0.09
CSDE1-215ENST00000533818 SULF1Q8IWU6 871 aa14.46□□□□□ -0.09
CSDE1-215ENST00000533818 RBM17Q96I25 401 aaKnown RBP14.46□□□□□ -0.09
CSDE1-215ENST00000533818 CRAMP1Q96RY5 1269 aa14.46□□□□□ -0.09
CSDE1-215ENST00000533818 TMEM106CQ9BVX2 250 aa14.46□□□□□ -0.09
CSDE1-215ENST00000533818 R3HDMLQ9H3Y0 253 aa14.46□□□□□ -0.09
CSDE1-215ENST00000533818 ZBTB12Q9Y330 459 aaPredicted RBP14.46□□□□□ -0.09
CSDE1-215ENST00000533818 KIF7Q2M1P5 1343 aa14.45□□□□□ -0.1
CSDE1-215ENST00000533818 PRAMEF22A3QJZ6 481 aa14.45□□□□□ -0.1
CSDE1-215ENST00000533818 EGFRP00533 1210 aa14.45□□□□□ -0.1
CSDE1-215ENST00000533818 OTOP1Q7RTM1 612 aa14.45□□□□□ -0.1
CSDE1-215ENST00000533818 DPF2Q92785 391 aa14.45□□□□□ -0.1
CSDE1-215ENST00000533818 CDCA5Q96FF9 252 aa14.45□□□□□ -0.1
CSDE1-215ENST00000533818 NUTM1Q86Y26 1132 aa14.44□□□□□ -0.1
CSDE1-215ENST00000533818 FMNL2Q96PY5 1086 aa14.44□□□□□ -0.1
CSDE1-215ENST00000533818 COL25A1Q9BXS0 654 aaPredicted RBP14.44□□□□□ -0.1
CSDE1-215ENST00000533818 RANBP2P49792 3224 aaKnown RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms