RNA–Protein interactions for RNA: ENST00000533671.1

NXF1-217, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-217ENST00000533671 SLFN5Q08AF3 891 aa22.4■■□□□ 1.18
NXF1-217ENST00000533671 CNKSR1Q969H4 720 aa22.4■■□□□ 1.18
NXF1-217ENST00000533671 TRMT112Q9UI30 125 aaKnown RBP22.4■■□□□ 1.18
NXF1-217ENST00000533671 SRGNP10124 158 aa22.39■■□□□ 1.17
NXF1-217ENST00000533671 STYK1Q6J9G0 422 aa22.39■■□□□ 1.17
NXF1-217ENST00000533671 MYD88Q99836 296 aa22.39■■□□□ 1.17
NXF1-217ENST00000533671 ABCC12Q96J65 1359 aa22.38■■□□□ 1.17
NXF1-217ENST00000533671 ZNF428Q96B54 188 aa22.38■■□□□ 1.17
NXF1-217ENST00000533671 RNF123Q5XPI4 1314 aa22.37■■□□□ 1.17
NXF1-217ENST00000533671 NPR1P16066 1061 aa22.37■■□□□ 1.17
NXF1-217ENST00000533671 HNRNPUQ00839 825 aaKnown RBP eCLIP22.37■■□□□ 1.17
NXF1-217ENST00000533671 KSR2Q6VAB6 950 aa22.37■■□□□ 1.17
NXF1-217ENST00000533671 CDCA7LQ96GN5 454 aa22.37■■□□□ 1.17
NXF1-217ENST00000533671 ISCA1Q9BUE6 129 aa22.37■■□□□ 1.17
NXF1-217ENST00000533671 MAP3K2Q9Y2U5 619 aa22.37■■□□□ 1.17
NXF1-217ENST00000533671 SH3TC1Q8TE82 1336 aa22.36■■□□□ 1.17
NXF1-217ENST00000533671 PI4KAP2A4QPH2 592 aa22.36■■□□□ 1.17
NXF1-217ENST00000533671 NEXNQ0ZGT2 675 aa22.36■■□□□ 1.17
NXF1-217ENST00000533671 FLIIQ13045 1269 aa22.36■■□□□ 1.17
NXF1-217ENST00000533671 FKBP5Q13451 457 aaPredicted RBP22.36■■□□□ 1.17
NXF1-217ENST00000533671 G2E3Q7L622 706 aa22.36■■□□□ 1.17
NXF1-217ENST00000533671 PI4KAP1Q8N8J0 262 aa22.36■■□□□ 1.17
NXF1-217ENST00000533671 RPGRQ92834 1020 aaKnown RBP22.36■■□□□ 1.17
NXF1-217ENST00000533671 NLRP3Q96P20 1036 aa22.36■■□□□ 1.17
NXF1-217ENST00000533671 METTL22Q9BUU2 404 aaPredicted RBP22.36■■□□□ 1.17
NXF1-217ENST00000533671 ZNF219Q9P2Y4 722 aaPredicted RBP22.36■■□□□ 1.17
NXF1-217ENST00000533671 TNRC6CQ9HCJ0 1690 aaKnown RBP22.36■■□□□ 1.17
NXF1-217ENST00000533671 SLX4Q8IY92 1834 aa22.34■■□□□ 1.17
NXF1-217ENST00000533671 KLRG2A4D1S0 409 aaPredicted RBP22.34■■□□□ 1.17
NXF1-217ENST00000533671 ALDH1B1P30837 517 aa22.34■■□□□ 1.17
NXF1-217ENST00000533671 RIC1Q4ADV7 1423 aa22.33■■□□□ 1.17
NXF1-217ENST00000533671 TRIM28Q13263 835 aaKnown RBP22.33■■□□□ 1.17
NXF1-217ENST00000533671 GOLGB1Q14789 3259 aaKnown RBP22.32■■□□□ 1.16
NXF1-217ENST00000533671 C21orf2O43822 256 aa22.32■■□□□ 1.16
NXF1-217ENST00000533671 HCLS1P14317 486 aaPredicted RBP22.32■■□□□ 1.16
NXF1-217ENST00000533671 RTL5Q5HYW3 569 aaPredicted RBP22.32■■□□□ 1.16
NXF1-217ENST00000533671 SLC10A5Q5PT55 438 aa22.32■■□□□ 1.16
NXF1-217ENST00000533671 PRPF40BQ6NWY9 871 aaKnown RBP22.32■■□□□ 1.16
NXF1-217ENST00000533671 CCDC191Q8NCU4 936 aa22.32■■□□□ 1.16
NXF1-217ENST00000533671 FAM89AQ96GI7 184 aa22.32■■□□□ 1.16
NXF1-217ENST00000533671 CWC25Q9NXE8 425 aaPredicted RBP22.32■■□□□ 1.16
NXF1-217ENST00000533671 ADCY9O60503 1353 aa22.31■■□□□ 1.16
NXF1-217ENST00000533671 SYNE4Q8N205 404 aa22.31■■□□□ 1.16
NXF1-217ENST00000533671 RBM17Q96I25 401 aaKnown RBP22.31■■□□□ 1.16
NXF1-217ENST00000533671 LAMB2P55268 1798 aa22.3■■□□□ 1.16
NXF1-217ENST00000533671 CRY2Q49AN0 593 aa22.3■■□□□ 1.16
NXF1-217ENST00000533671 CCDC88AQ3V6T2 1871 aa22.29■■□□□ 1.16
NXF1-217ENST00000533671 HSP90B1P14625 803 aaKnown RBP22.29■■□□□ 1.16
NXF1-217ENST00000533671 SOGA3Q5TF21 947 aa22.29■■□□□ 1.16
NXF1-217ENST00000533671 TRMT2AQ8IZ69 625 aaKnown RBP22.29■■□□□ 1.16
NXF1-217ENST00000533671 ZBTB38Q8NAP3 1195 aaPredicted RBP22.29■■□□□ 1.16
NXF1-217ENST00000533671 DNAAF4Q8WXU2 420 aa22.29■■□□□ 1.16
NXF1-217ENST00000533671 DDX60Q8IY21 1712 aaKnown RBP22.28■■□□□ 1.16
NXF1-217ENST00000533671 SBF1O95248 1867 aa22.28■■□□□ 1.16
NXF1-217ENST00000533671 IRS4O14654 1257 aaPredicted RBP22.27■■□□□ 1.16
NXF1-217ENST00000533671 C3orf67Q6ZVT6 689 aa22.27■■□□□ 1.16
NXF1-217ENST00000533671 UTRNP46939 3433 aa22.27■■□□□ 1.16
NXF1-217ENST00000533671 PCCAP05165 728 aaPredicted RBP22.26■■□□□ 1.15
NXF1-217ENST00000533671 HOXA10P31260 410 aaPredicted RBP22.26■■□□□ 1.15
NXF1-217ENST00000533671 RASSF7Q02833 373 aa22.26■■□□□ 1.15
NXF1-217ENST00000533671 DDX46Q7L014 1031 aaKnown RBP22.26■■□□□ 1.15
NXF1-217ENST00000533671 CRAMP1Q96RY5 1269 aa22.26■■□□□ 1.15
NXF1-217ENST00000533671 TMX4Q9H1E5 349 aaPredicted RBP22.26■■□□□ 1.15
NXF1-217ENST00000533671 IGKV5-2P06315 115 aa22.25■■□□□ 1.15
NXF1-217ENST00000533671 CT47B1P0C2W7 299 aaPredicted RBP22.25■■□□□ 1.15
NXF1-217ENST00000533671 CWF19L2Q2TBE0 894 aaKnown RBP22.25■■□□□ 1.15
NXF1-217ENST00000533671 CCDC93Q567U6 631 aa22.25■■□□□ 1.15
NXF1-217ENST00000533671 C9orf131Q5VYM1 1079 aa22.25■■□□□ 1.15
NXF1-217ENST00000533671 FER1L6Q2WGJ9 1857 aa22.25■■□□□ 1.15
NXF1-217ENST00000533671 NEURL1BA8MQ27 555 aa22.24■■□□□ 1.15
NXF1-217ENST00000533671 F6X3S4 739 aa22.24■■□□□ 1.15
NXF1-217ENST00000533671 MRPL50Q8N5N7 158 aaKnown RBP22.24■■□□□ 1.15
NXF1-217ENST00000533671 JARID2Q92833 1246 aaPredicted RBP22.24■■□□□ 1.15
NXF1-217ENST00000533671 BCL2L13Q9BXK5 485 aa22.24■■□□□ 1.15
NXF1-217ENST00000533671 SMC4Q9NTJ3 1288 aa22.24■■□□□ 1.15
NXF1-217ENST00000533671 RNF181Q9P0P0 153 aa22.24■■□□□ 1.15
NXF1-217ENST00000533671 PPEF1O14829 653 aaPredicted RBP22.23■■□□□ 1.15
NXF1-217ENST00000533671 ALDH1L2Q3SY69 923 aa22.23■■□□□ 1.15
NXF1-217ENST00000533671 SLC4A10Q6U841 1118 aa22.23■■□□□ 1.15
NXF1-217ENST00000533671 LINS1Q8NG48 757 aa22.23■■□□□ 1.15
NXF1-217ENST00000533671 SSH1Q8WYL5 1049 aa22.23■■□□□ 1.15
NXF1-217ENST00000533671 ZNF784Q8NCA9 323 aaPredicted RBP22.22■■□□□ 1.15
NXF1-217ENST00000533671 TAOK3Q9H2K8 898 aa22.22■■□□□ 1.15
NXF1-217ENST00000533671 TAF1P21675 1872 aa22.22■■□□□ 1.15
NXF1-217ENST00000533671 MYH3P11055 1940 aa22.21■■□□□ 1.15
NXF1-217ENST00000533671 PDE8AO60658 829 aa22.21■■□□□ 1.15
NXF1-217ENST00000533671 LMNB1P20700 586 aa22.21■■□□□ 1.15
NXF1-217ENST00000533671 RTKN2Q8IZC4 609 aa22.21■■□□□ 1.15
NXF1-217ENST00000533671 ABCC4O15439 1325 aa22.21■■□□□ 1.15
NXF1-217ENST00000533671 NFKBIEO00221 500 aa22.2■■□□□ 1.14
NXF1-217ENST00000533671 GCKRQ14397 625 aa22.2■■□□□ 1.14
NXF1-217ENST00000533671 SF3B3Q15393 1217 aaKnown RBP22.2■■□□□ 1.14
NXF1-217ENST00000533671 CC2D2BQ6DHV5 1058 aa22.2■■□□□ 1.14
NXF1-217ENST00000533671 C7orf43Q8WVR3 580 aa22.2■■□□□ 1.14
NXF1-217ENST00000533671 PTPRCP08575 1304 aa22.2■■□□□ 1.14
NXF1-217ENST00000533671 GRAPQ13588 217 aa22.19■■□□□ 1.14
NXF1-217ENST00000533671 OLFM4Q6UX06 510 aa22.19■■□□□ 1.14
NXF1-217ENST00000533671 UBE3BQ7Z3V4 1068 aa22.19■■□□□ 1.14
NXF1-217ENST00000533671 GRAPLQ8TC17 118 aaPredicted RBP22.19■■□□□ 1.14
NXF1-217ENST00000533671 ZNF526Q8TF50 670 aaPredicted RBP22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms