RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 MVPQ14764 893 aaKnown RBP15.05■□□□□ -0
COMMD9-208ENST00000533643 IBTKQ9P2D0 1353 aaPredicted RBP15.05■□□□□ -0
COMMD9-208ENST00000533643 CARMIL3Q8ND23 1372 aa15.04■□□□□ -0
COMMD9-208ENST00000533643 FAM177BA6PVY3 158 aa15.04■□□□□ -0
COMMD9-208ENST00000533643 POLRMTO00411 1230 aaKnown RBP15.04■□□□□ -0
COMMD9-208ENST00000533643 NTSR2O95665 410 aa15.04■□□□□ -0
COMMD9-208ENST00000533643 MMP10P09238 476 aa15.04■□□□□ -0
COMMD9-208ENST00000533643 IRX6P78412 446 aaPredicted RBP15.04■□□□□ -0
COMMD9-208ENST00000533643 JARID2Q92833 1246 aaPredicted RBP15.04■□□□□ -0
COMMD9-208ENST00000533643 CRBNQ96SW2 442 aa15.04■□□□□ -0
COMMD9-208ENST00000533643 UTP14AQ9BVJ6 771 aaKnown RBP15.04■□□□□ -0
COMMD9-208ENST00000533643 MTFR1LQ9H019 292 aa15.04■□□□□ -0
COMMD9-208ENST00000533643 USP44Q9H0E7 712 aa15.04■□□□□ -0
COMMD9-208ENST00000533643 TRMT112Q9UI30 125 aaKnown RBP15.04■□□□□ -0
COMMD9-208ENST00000533643 ATF5Q9Y2D1 282 aaPredicted RBP15.04■□□□□ -0
COMMD9-208ENST00000533643 ANKRD36CQ5JPF3 1778 aa15.03■□□□□ -0
COMMD9-208ENST00000533643 H7C1W4 665 aa15.03■□□□□ -0
COMMD9-208ENST00000533643 GRM8O00222 908 aa15.03■□□□□ -0
COMMD9-208ENST00000533643 ZBTB7BO15156 539 aaPredicted RBP15.03■□□□□ -0
COMMD9-208ENST00000533643 PCCAP05165 728 aaPredicted RBP15.03■□□□□ -0
COMMD9-208ENST00000533643 PPP1R42Q7Z4L9 355 aa15.03■□□□□ -0
COMMD9-208ENST00000533643 NBPF5PQ86XG9 351 aaPredicted RBP15.03■□□□□ -0
COMMD9-208ENST00000533643 SYNE4Q8N205 404 aa15.03■□□□□ -0
COMMD9-208ENST00000533643 MEIS3Q99687 375 aa15.03■□□□□ -0
COMMD9-208ENST00000533643 C9orf78Q9NZ63 289 aaPredicted RBP15.03■□□□□ -0
COMMD9-208ENST00000533643 UTYO14607 1347 aa15.02■□□□□ -0
COMMD9-208ENST00000533643 SERPINB2P05120 415 aa15.02■□□□□ -0
COMMD9-208ENST00000533643 CASP7P55210 303 aa15.02■□□□□ -0
COMMD9-208ENST00000533643 ZBTB38Q8NAP3 1195 aaPredicted RBP15.02■□□□□ -0
COMMD9-208ENST00000533643 FAM89AQ96GI7 184 aa15.02■□□□□ -0
COMMD9-208ENST00000533643 NYXQ9GZU5 481 aa15.02■□□□□ -0
COMMD9-208ENST00000533643 PARP3Q9Y6F1 533 aa15.02■□□□□ -0
COMMD9-208ENST00000533643 N4BP2Q86UW6 1770 aaPredicted RBP15.02□□□□□ -0.01
COMMD9-208ENST00000533643 NBPF7P0C2Y1 421 aaPredicted RBP15.01□□□□□ -0.01
COMMD9-208ENST00000533643 RTL5Q5HYW3 569 aaPredicted RBP15.01□□□□□ -0.01
COMMD9-208ENST00000533643 TPTE2Q6XPS3 522 aa15.01□□□□□ -0.01
COMMD9-208ENST00000533643 UBE3BQ7Z3V4 1068 aa15.01□□□□□ -0.01
COMMD9-208ENST00000533643 NUTM1Q86Y26 1132 aa15.01□□□□□ -0.01
COMMD9-208ENST00000533643 DDX19BQ9UMR2 479 aa15.01□□□□□ -0.01
COMMD9-208ENST00000533643 COL24A1Q17RW2 1714 aa15□□□□□ -0.01
COMMD9-208ENST00000533643 SH3TC1Q8TE82 1336 aa15□□□□□ -0.01
COMMD9-208ENST00000533643 GNAI3P08754 354 aa15□□□□□ -0.01
COMMD9-208ENST00000533643 ERFEQ4G0M1 354 aa15□□□□□ -0.01
COMMD9-208ENST00000533643 CNBD1Q8NA66 436 aa15□□□□□ -0.01
COMMD9-208ENST00000533643 EXOC6Q8TAG9 804 aa15□□□□□ -0.01
COMMD9-208ENST00000533643 AFDNP55196 1824 aaKnown RBP15□□□□□ -0.01
COMMD9-208ENST00000533643 PTGER2P43116 358 aa14.99□□□□□ -0.01
COMMD9-208ENST00000533643 SLC10A5Q5PT55 438 aa14.99□□□□□ -0.01
COMMD9-208ENST00000533643 PRR5LQ6MZQ0 368 aa14.99□□□□□ -0.01
COMMD9-208ENST00000533643 CCDC24Q8N4L8 307 aa14.99□□□□□ -0.01
COMMD9-208ENST00000533643 SGIP1Q9BQI5 828 aa14.99□□□□□ -0.01
COMMD9-208ENST00000533643 ZBTB40Q9NUA8 1239 aa14.99□□□□□ -0.01
COMMD9-208ENST00000533643 CDHR2Q9BYE9 1310 aa14.98□□□□□ -0.01
COMMD9-208ENST00000533643 IRS4O14654 1257 aaPredicted RBP14.98□□□□□ -0.01
COMMD9-208ENST00000533643 UBTFL1P0CB47 393 aaPredicted RBP14.98□□□□□ -0.01
COMMD9-208ENST00000533643 HCLS1P14317 486 aaPredicted RBP14.98□□□□□ -0.01
COMMD9-208ENST00000533643 GTF2E1P29083 439 aaPredicted RBP14.98□□□□□ -0.01
COMMD9-208ENST00000533643 KAZALD1Q96I82 304 aa14.98□□□□□ -0.01
COMMD9-208ENST00000533643 SUCLG2Q96I99 432 aa14.98□□□□□ -0.01
COMMD9-208ENST00000533643 ABCC12Q96J65 1359 aa14.98□□□□□ -0.01
COMMD9-208ENST00000533643 POLD1P28340 1107 aa14.97□□□□□ -0.01
COMMD9-208ENST00000533643 EPHA10Q5JZY3 1008 aa14.97□□□□□ -0.01
COMMD9-208ENST00000533643 CHMP4BQ9H444 224 aaKnown RBP14.97□□□□□ -0.01
COMMD9-208ENST00000533643 NPHP1O15259 732 aa14.96□□□□□ -0.01
COMMD9-208ENST00000533643 GNAI2P04899 355 aa14.96□□□□□ -0.01
COMMD9-208ENST00000533643 NEFLP07196 543 aa14.96□□□□□ -0.01
COMMD9-208ENST00000533643 ST5P78524 1137 aa14.96□□□□□ -0.01
COMMD9-208ENST00000533643 FOXO4P98177 505 aa14.96□□□□□ -0.01
COMMD9-208ENST00000533643 PLA2G12BQ9BX93 195 aa14.96□□□□□ -0.01
COMMD9-208ENST00000533643 SPON1Q9HCB6 807 aa14.96□□□□□ -0.01
COMMD9-208ENST00000533643 NRXN2Q9P2S2 1712 aa14.96□□□□□ -0.01
COMMD9-208ENST00000533643 LRRFIP2Q9Y608 721 aaKnown RBP14.96□□□□□ -0.01
COMMD9-208ENST00000533643 C3orf67Q6ZVT6 689 aa14.95□□□□□ -0.02
COMMD9-208ENST00000533643 BICC1Q9H694 974 aaKnown RBP14.95□□□□□ -0.02
COMMD9-208ENST00000533643 C1orf115Q9H7X2 142 aa14.95□□□□□ -0.02
COMMD9-208ENST00000533643 HDAC5Q9UQL6 1122 aa14.95□□□□□ -0.02
COMMD9-208ENST00000533643 RIC1Q4ADV7 1423 aa14.94□□□□□ -0.02
COMMD9-208ENST00000533643 PDE8AO60658 829 aa14.94□□□□□ -0.02
COMMD9-208ENST00000533643 HSP90B1P14625 803 aaKnown RBP14.94□□□□□ -0.02
COMMD9-208ENST00000533643 ANKRD44Q8N8A2 993 aa14.94□□□□□ -0.02
COMMD9-208ENST00000533643 BRIP1Q9BX63 1249 aa14.94□□□□□ -0.02
COMMD9-208ENST00000533643 KLRG2A4D1S0 409 aaPredicted RBP14.93□□□□□ -0.02
COMMD9-208ENST00000533643 CSF1RP07333 972 aa14.93□□□□□ -0.02
COMMD9-208ENST00000533643 CTSWP56202 376 aa14.93□□□□□ -0.02
COMMD9-208ENST00000533643 AAMPQ13685 434 aa14.93□□□□□ -0.02
COMMD9-208ENST00000533643 TTLL11Q8NHH1 800 aa14.93□□□□□ -0.02
COMMD9-208ENST00000533643 SF3B3Q15393 1217 aaKnown RBP14.92□□□□□ -0.02
COMMD9-208ENST00000533643 RABL6Q3YEC7 729 aaPredicted RBP14.92□□□□□ -0.02
COMMD9-208ENST00000533643 LMBR1LQ6UX01 489 aa14.92□□□□□ -0.02
COMMD9-208ENST00000533643 NLRP3Q96P20 1036 aa14.92□□□□□ -0.02
COMMD9-208ENST00000533643 DDX60Q8IY21 1712 aaKnown RBP14.92□□□□□ -0.02
COMMD9-208ENST00000533643 C10orf71Q711Q0 1435 aa14.92□□□□□ -0.02
COMMD9-208ENST00000533643 PCDHB15Q9Y5E8 787 aa14.91□□□□□ -0.02
COMMD9-208ENST00000533643 PDE6BP35913 854 aa14.9□□□□□ -0.02
COMMD9-208ENST00000533643 ATP8B2P98198 1209 aa14.9□□□□□ -0.02
COMMD9-208ENST00000533643 MTX1Q13505 466 aa14.9□□□□□ -0.02
COMMD9-208ENST00000533643 CRY2Q49AN0 593 aa14.9□□□□□ -0.02
COMMD9-208ENST00000533643 CCDC152Q4G0S7 254 aa14.9□□□□□ -0.02
COMMD9-208ENST00000533643 CEP85Q6P2H3 762 aa14.9□□□□□ -0.02
COMMD9-208ENST00000533643 CCDC85AQ96PX6 553 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms