RNA–Protein interactions for RNA: ENST00000533559.5

FNTA-213, Transcript of farnesyltransferase, CAAX box, alpha, humanhuman

TSL 3

Gene FNTA, Length 429 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNTA-213ENST00000533559 DDX54Q8TDD1 881 aaKnown RBP9.49□□□□□ -0.89
FNTA-213ENST00000533559 MEIS3Q99687 375 aa9.49□□□□□ -0.89
FNTA-213ENST00000533559 UBR3Q6ZT12 1888 aa9.49□□□□□ -0.89
FNTA-213ENST00000533559 C4BP0C0L5 1744 aa9.48□□□□□ -0.89
FNTA-213ENST00000533559 LTV1Q96GA3 475 aaPredicted RBP9.48□□□□□ -0.89
FNTA-213ENST00000533559 DDX58O95786 925 aaKnown RBP9.47□□□□□ -0.89
FNTA-213ENST00000533559 ANAPC15P60006 121 aa9.47□□□□□ -0.89
FNTA-213ENST00000533559 ERC1Q8IUD2 1116 aa9.47□□□□□ -0.89
FNTA-213ENST00000533559 IL17REQ8NFR9 667 aa9.47□□□□□ -0.89
FNTA-213ENST00000533559 GPATCH3Q96I76 525 aa9.47□□□□□ -0.89
FNTA-213ENST00000533559 DBF4Q9UBU7 674 aaPredicted RBP9.47□□□□□ -0.89
FNTA-213ENST00000533559 IBTKQ9P2D0 1353 aaPredicted RBP9.47□□□□□ -0.89
FNTA-213ENST00000533559 N4BP2Q86UW6 1770 aaPredicted RBP9.47□□□□□ -0.89
FNTA-213ENST00000533559 PKD1L3Q7Z443 1732 aa9.46□□□□□ -0.89
FNTA-213ENST00000533559 BTBD11A6QL63 1104 aa9.46□□□□□ -0.9
FNTA-213ENST00000533559 GSPT1P15170 499 aaKnown RBP9.46□□□□□ -0.9
FNTA-213ENST00000533559 SDSP20132 328 aa9.46□□□□□ -0.9
FNTA-213ENST00000533559 MX1P20591 662 aa9.46□□□□□ -0.9
FNTA-213ENST00000533559 PRIM1P49642 420 aaKnown RBP9.46□□□□□ -0.9
FNTA-213ENST00000533559 PDE1AP54750 535 aa9.46□□□□□ -0.9
FNTA-213ENST00000533559 KRT24Q2M2I5 525 aa9.46□□□□□ -0.9
FNTA-213ENST00000533559 DCAF8Q5TAQ9 597 aa9.46□□□□□ -0.9
FNTA-213ENST00000533559 MSL1Q68DK7 614 aa9.46□□□□□ -0.9
FNTA-213ENST00000533559 ZNF530Q6P9A1 599 aaPredicted RBP9.46□□□□□ -0.9
FNTA-213ENST00000533559 FAM212AQ96EL1 285 aa9.46□□□□□ -0.9
FNTA-213ENST00000533559 USP26Q9BXU7 913 aa9.46□□□□□ -0.9
FNTA-213ENST00000533559 HYPKQ9NX55 129 aa9.46□□□□□ -0.9
FNTA-213ENST00000533559 MIS18AQ9NYP9 233 aa9.46□□□□□ -0.9
FNTA-213ENST00000533559 STAP2Q9UGK3 403 aa9.46□□□□□ -0.9
FNTA-213ENST00000533559 CCNL1Q9UK58 526 aaPredicted RBP9.46□□□□□ -0.9
FNTA-213ENST00000533559 GOLGA6L3A6NEY3 463 aa9.45□□□□□ -0.9
FNTA-213ENST00000533559 ALDH1L1O75891 902 aa9.45□□□□□ -0.9
FNTA-213ENST00000533559 RAB3GAP1Q15042 981 aa9.45□□□□□ -0.9
FNTA-213ENST00000533559 KIF1BPQ96EK5 621 aa9.45□□□□□ -0.9
FNTA-213ENST00000533559 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.45□□□□□ -0.9
FNTA-213ENST00000533559 ADCY9O60503 1353 aa9.45□□□□□ -0.9
FNTA-213ENST00000533559 TRAK2O60296 914 aa9.44□□□□□ -0.9
FNTA-213ENST00000533559 GRIN3BO60391 1043 aa9.44□□□□□ -0.9
FNTA-213ENST00000533559 DDIT3P35638 169 aa9.44□□□□□ -0.9
FNTA-213ENST00000533559 EIF4A1P60842 406 aaKnown RBP9.44□□□□□ -0.9
FNTA-213ENST00000533559 CLEC17AQ6ZS10 378 aa9.44□□□□□ -0.9
FNTA-213ENST00000533559 G2E3Q7L622 706 aa9.44□□□□□ -0.9
FNTA-213ENST00000533559 COL23A1Q86Y22 540 aaPredicted RBP9.44□□□□□ -0.9
FNTA-213ENST00000533559 SSH3Q8TE77 659 aa9.44□□□□□ -0.9
FNTA-213ENST00000533559 DNAAF4Q8WXU2 420 aa9.44□□□□□ -0.9
FNTA-213ENST00000533559 SPG7Q9UQ90 795 aa9.44□□□□□ -0.9
FNTA-213ENST00000533559 KIAA1551Q9HCM1 1747 aa9.43□□□□□ -0.9
FNTA-213ENST00000533559 CICQ96RK0 1608 aaPredicted RBP9.43□□□□□ -0.9
FNTA-213ENST00000533559 F6X3S4 739 aa9.43□□□□□ -0.9
FNTA-213ENST00000533559 NBPF6Q5VWK0 638 aa9.43□□□□□ -0.9
FNTA-213ENST00000533559 ZCRB1Q8TBF4 217 aaKnown RBP9.43□□□□□ -0.9
FNTA-213ENST00000533559 RUFY2Q8WXA3 655 aa9.43□□□□□ -0.9
FNTA-213ENST00000533559 RAPGEF4Q8WZA2 1011 aa9.43□□□□□ -0.9
FNTA-213ENST00000533559 NBPF4Q96M43 638 aa9.43□□□□□ -0.9
FNTA-213ENST00000533559 KIF2CQ99661 725 aa9.43□□□□□ -0.9
FNTA-213ENST00000533559 TTC41PQ6P2S7 1318 aa9.42□□□□□ -0.9
FNTA-213ENST00000533559 HIP1O00291 1037 aa9.42□□□□□ -0.9
FNTA-213ENST00000533559 RNMTO43148 476 aaKnown RBP9.42□□□□□ -0.9
FNTA-213ENST00000533559 PDIA4P13667 645 aaKnown RBP9.42□□□□□ -0.9
FNTA-213ENST00000533559 MRE11P49959 708 aa9.42□□□□□ -0.9
FNTA-213ENST00000533559 CNTROBQ8N137 903 aa9.42□□□□□ -0.9
FNTA-213ENST00000533559 USHBP1Q8N6Y0 703 aa9.42□□□□□ -0.9
FNTA-213ENST00000533559 SPRYD3Q8NCJ5 442 aa9.42□□□□□ -0.9
FNTA-213ENST00000533559 ZNF526Q8TF50 670 aaPredicted RBP9.42□□□□□ -0.9
FNTA-213ENST00000533559 ANP32BQ92688 251 aaKnown RBP9.42□□□□□ -0.9
FNTA-213ENST00000533559 USP44Q9H0E7 712 aa9.42□□□□□ -0.9
FNTA-213ENST00000533559 GPBP1L1Q9HC44 474 aaPredicted RBP9.42□□□□□ -0.9
FNTA-213ENST00000533559 LRRFIP2Q9Y608 721 aaKnown RBP9.42□□□□□ -0.9
FNTA-213ENST00000533559 KIF13BQ9NQT8 1826 aa9.42□□□□□ -0.9
FNTA-213ENST00000533559 PALLDQ8WX93 1383 aa9.41□□□□□ -0.9
FNTA-213ENST00000533559 TRIM6-TRIM34B2RNG4 842 aa9.41□□□□□ -0.9
FNTA-213ENST00000533559 APBB1O00213 710 aa9.41□□□□□ -0.9
FNTA-213ENST00000533559 TATP17735 454 aaPredicted RBP9.41□□□□□ -0.9
FNTA-213ENST00000533559 NEXNQ0ZGT2 675 aa9.41□□□□□ -0.9
FNTA-213ENST00000533559 MTX1Q13505 466 aa9.41□□□□□ -0.9
FNTA-213ENST00000533559 KIAA1211Q6ZU35 1233 aa9.41□□□□□ -0.9
FNTA-213ENST00000533559 TNPO1Q92973 898 aaKnown RBP9.41□□□□□ -0.9
FNTA-213ENST00000533559 ESYT1Q9BSJ8 1104 aa9.41□□□□□ -0.9
FNTA-213ENST00000533559 C9orf78Q9NZ63 289 aaPredicted RBP9.41□□□□□ -0.9
FNTA-213ENST00000533559 KDM3BQ7LBC6 1761 aa9.41□□□□□ -0.9
FNTA-213ENST00000533559 SALL3Q9BXA9 1300 aa9.4□□□□□ -0.9
FNTA-213ENST00000533559 SRGAP3O43295 1099 aa9.4□□□□□ -0.9
FNTA-213ENST00000533559 SMARCA5O60264 1052 aaPredicted RBP9.4□□□□□ -0.9
FNTA-213ENST00000533559 SURF6O75683 361 aaKnown RBP9.4□□□□□ -0.9
FNTA-213ENST00000533559 GLRX3O76003 335 aaKnown RBP9.4□□□□□ -0.9
FNTA-213ENST00000533559 EIF2S2P20042 333 aaKnown RBP9.4□□□□□ -0.9
FNTA-213ENST00000533559 OS9Q13438 667 aaPredicted RBP9.4□□□□□ -0.9
FNTA-213ENST00000533559 KSR2Q6VAB6 950 aa9.4□□□□□ -0.9
FNTA-213ENST00000533559 C16orf71Q8IYS4 520 aaPredicted RBP9.4□□□□□ -0.9
FNTA-213ENST00000533559 CLASRPQ8N2M8 674 aaKnown RBP9.4□□□□□ -0.9
FNTA-213ENST00000533559 ZNF579Q8NAF0 562 aaKnown RBP9.4□□□□□ -0.9
FNTA-213ENST00000533559 SP7Q8TDD2 431 aaPredicted RBP9.4□□□□□ -0.9
FNTA-213ENST00000533559 IL17RAQ96F46 866 aa9.4□□□□□ -0.9
FNTA-213ENST00000533559 INTS4Q96HW7 963 aaKnown RBP9.4□□□□□ -0.9
FNTA-213ENST00000533559 WWC3Q9ULE0 1092 aa9.4□□□□□ -0.9
FNTA-213ENST00000533559 EXOC6BQ9Y2D4 811 aa9.4□□□□□ -0.9
FNTA-213ENST00000533559 BRCA1P38398 1863 aaKnown RBP9.4□□□□□ -0.91
FNTA-213ENST00000533559 WDR90Q96KV7 1748 aa9.39□□□□□ -0.91
FNTA-213ENST00000533559 PCDH11XQ9BZA7 1347 aa9.39□□□□□ -0.91
FNTA-213ENST00000533559 PCDH11YQ9BZA8 1340 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms