RNA–Protein interactions for RNA: ENST00000533521.5

BEST1-207, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,128 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-207ENST00000533521 KDM2BQ8NHM5 1336 aa28.88■■■□□ 2.21
BEST1-207ENST00000533521 TNRC6CQ9HCJ0 1690 aaKnown RBP28.87■■■□□ 2.21
BEST1-207ENST00000533521 NUTM1Q86Y26 1132 aa28.87■■■□□ 2.21
BEST1-207ENST00000533521 WWC1Q8IX03 1113 aa28.87■■■□□ 2.21
BEST1-207ENST00000533521 PLBD2Q8NHP8 589 aa28.87■■■□□ 2.21
BEST1-207ENST00000533521 UTP14AQ9BVJ6 771 aaKnown RBP28.86■■■□□ 2.21
BEST1-207ENST00000533521 PRELPP51888 382 aa28.85■■■□□ 2.21
BEST1-207ENST00000533521 AIMP1Q12904 312 aaKnown RBP28.85■■■□□ 2.21
BEST1-207ENST00000533521 ANKRD13DQ6ZTN6 518 aa28.85■■■□□ 2.21
BEST1-207ENST00000533521 CCDC93Q567U6 631 aa28.84■■■□□ 2.21
BEST1-207ENST00000533521 NLRP10Q86W26 655 aa28.84■■■□□ 2.21
BEST1-207ENST00000533521 TAOK3Q9H2K8 898 aa28.84■■■□□ 2.21
BEST1-207ENST00000533521 CC2D2BQ6DHV5 1058 aa28.83■■■□□ 2.21
BEST1-207ENST00000533521 GRIPAP1Q4V328 841 aa28.82■■■□□ 2.2
BEST1-207ENST00000533521 RTKN2Q8IZC4 609 aa28.82■■■□□ 2.2
BEST1-207ENST00000533521 CRAMP1Q96RY5 1269 aa28.82■■■□□ 2.2
BEST1-207ENST00000533521 TIAM2Q8IVF5 1701 aa28.82■■■□□ 2.2
BEST1-207ENST00000533521 TRIM28Q13263 835 aaKnown RBP28.81■■■□□ 2.2
BEST1-207ENST00000533521 C8orf58Q8NAV2 365 aa28.81■■■□□ 2.2
BEST1-207ENST00000533521 NLRP3Q96P20 1036 aa28.81■■■□□ 2.2
BEST1-207ENST00000533521 GLTPD2A6NH11 291 aa28.8■■■□□ 2.2
BEST1-207ENST00000533521 CCDC30Q5VVM6 783 aa28.8■■■□□ 2.2
BEST1-207ENST00000533521 RPGRQ92834 1020 aaKnown RBP28.8■■■□□ 2.2
BEST1-207ENST00000533521 ZNF219Q9P2Y4 722 aaPredicted RBP28.8■■■□□ 2.2
BEST1-207ENST00000533521 TOMM70O94826 608 aa28.79■■■□□ 2.2
BEST1-207ENST00000533521 WDR63Q8IWG1 891 aa28.79■■■□□ 2.2
BEST1-207ENST00000533521 ISCA1Q9BUE6 129 aa28.79■■■□□ 2.2
BEST1-207ENST00000533521 RBM17Q96I25 401 aaKnown RBP28.78■■■□□ 2.2
BEST1-207ENST00000533521 NMRK2Q9NPI5 230 aa28.78■■■□□ 2.2
BEST1-207ENST00000533521 SH3TC1Q8TE82 1336 aa28.77■■■□□ 2.2
BEST1-207ENST00000533521 FKBP4Q02790 459 aaKnown RBP eCLIP28.77■■■□□ 2.2
BEST1-207ENST00000533521 SNED1Q8TER0 1413 aa28.76■■■□□ 2.19
BEST1-207ENST00000533521 ELL2O00472 640 aaPredicted RBP28.75■■■□□ 2.19
BEST1-207ENST00000533521 DPY19L2Q6NUT2 758 aa28.75■■■□□ 2.19
BEST1-207ENST00000533521 TRMT112Q9UI30 125 aaKnown RBP28.75■■■□□ 2.19
BEST1-207ENST00000533521 GOLGA2Q08379 1002 aa28.74■■■□□ 2.19
BEST1-207ENST00000533521 PSMD1Q99460 953 aa28.74■■■□□ 2.19
BEST1-207ENST00000533521 RBM46Q8TBY0 533 aaKnown RBP28.73■■■□□ 2.19
BEST1-207ENST00000533521 CACNA1FO60840 1977 aa28.73■■■□□ 2.19
BEST1-207ENST00000533521 LAMB2P55268 1798 aa28.73■■■□□ 2.19
BEST1-207ENST00000533521 SENP3-EIF4A1A0A087X0R7 540 aa28.72■■■□□ 2.19
BEST1-207ENST00000533521 TSPYL6Q8N831 410 aa28.72■■■□□ 2.19
BEST1-207ENST00000533521 TSR2Q969E8 191 aaKnown RBP28.72■■■□□ 2.19
BEST1-207ENST00000533521 WDR90Q96KV7 1748 aa28.72■■■□□ 2.19
BEST1-207ENST00000533521 VEGFAP15692 232 aaPredicted RBP28.71■■■□□ 2.19
BEST1-207ENST00000533521 C3orf67Q6ZVT6 689 aa28.71■■■□□ 2.19
BEST1-207ENST00000533521 RIC3Q7Z5B4 369 aa28.71■■■□□ 2.19
BEST1-207ENST00000533521 PHAXQ9H814 394 aaKnown RBP28.71■■■□□ 2.19
BEST1-207ENST00000533521 DDX58O95786 925 aaKnown RBP28.7■■■□□ 2.18
BEST1-207ENST00000533521 RRAGCQ9HB90 399 aa28.7■■■□□ 2.18
BEST1-207ENST00000533521 BBOX1O75936 387 aa28.69■■■□□ 2.18
BEST1-207ENST00000533521 HSPA6P17066 643 aa28.69■■■□□ 2.18
BEST1-207ENST00000533521 TWISTNBQ3B726 338 aaPredicted RBP28.69■■■□□ 2.18
BEST1-207ENST00000533521 C16orf71Q8IYS4 520 aaPredicted RBP28.69■■■□□ 2.18
BEST1-207ENST00000533521 STK31Q9BXU1 1019 aa28.68■■■□□ 2.18
BEST1-207ENST00000533521 DDX60Q8IY21 1712 aaKnown RBP28.68■■■□□ 2.18
BEST1-207ENST00000533521 PPEF1O14829 653 aaPredicted RBP28.67■■■□□ 2.18
BEST1-207ENST00000533521 HSP90B1P14625 803 aaKnown RBP28.67■■■□□ 2.18
BEST1-207ENST00000533521 FSTL1Q12841 308 aa28.67■■■□□ 2.18
BEST1-207ENST00000533521 HCLS1P14317 486 aaPredicted RBP28.66■■■□□ 2.18
BEST1-207ENST00000533521 OLFM4Q6UX06 510 aa28.66■■■□□ 2.18
BEST1-207ENST00000533521 TMC4Q7Z404 712 aa28.66■■■□□ 2.18
BEST1-207ENST00000533521 FAM9BQ8IZU0 186 aa28.66■■■□□ 2.18
BEST1-207ENST00000533521 SYNE4Q8N205 404 aa28.66■■■□□ 2.18
BEST1-207ENST00000533521 CCDC191Q8NCU4 936 aa28.66■■■□□ 2.18
BEST1-207ENST00000533521 VPS33BQ9H267 617 aa28.66■■■□□ 2.18
BEST1-207ENST00000533521 ATP6V0A2Q9Y487 856 aa28.66■■■□□ 2.18
BEST1-207ENST00000533521 FANCIQ9NVI1 1328 aa28.66■■■□□ 2.18
BEST1-207ENST00000533521 ATP5J2-PTCD1G3V325 749 aa28.65■■■□□ 2.18
BEST1-207ENST00000533521 IARSP41252 1262 aaKnown RBP28.65■■■□□ 2.18
BEST1-207ENST00000533521 SF3B3Q15393 1217 aaKnown RBP28.65■■■□□ 2.18
BEST1-207ENST00000533521 METTL22Q9BUU2 404 aaPredicted RBP28.65■■■□□ 2.18
BEST1-207ENST00000533521 TMX4Q9H1E5 349 aaPredicted RBP28.65■■■□□ 2.18
BEST1-207ENST00000533521 ABCC4O15439 1325 aa28.65■■■□□ 2.18
BEST1-207ENST00000533521 DDX46Q7L014 1031 aaKnown RBP28.64■■■□□ 2.18
BEST1-207ENST00000533521 ZBTB38Q8NAP3 1195 aaPredicted RBP28.64■■■□□ 2.18
BEST1-207ENST00000533521 ZNF277Q9NRM2 450 aaPredicted RBP28.64■■■□□ 2.18
BEST1-207ENST00000533521 KSR2Q6VAB6 950 aa28.63■■■□□ 2.17
BEST1-207ENST00000533521 FAM89AQ96GI7 184 aa28.63■■■□□ 2.17
BEST1-207ENST00000533521 GRAPQ13588 217 aa28.62■■■□□ 2.17
BEST1-207ENST00000533521 SP8Q8IXZ3 490 aa28.62■■■□□ 2.17
BEST1-207ENST00000533521 GRAPLQ8TC17 118 aaPredicted RBP28.62■■■□□ 2.17
BEST1-207ENST00000533521 POTECB2RU33 542 aa28.61■■■□□ 2.17
BEST1-207ENST00000533521 FZD9O00144 591 aa28.61■■■□□ 2.17
BEST1-207ENST00000533521 L3MBTL3Q96JM7 780 aaPredicted RBP28.61■■■□□ 2.17
BEST1-207ENST00000533521 MYH16Q9H6N6 1097 aa28.61■■■□□ 2.17
BEST1-207ENST00000533521 RTFDC1Q9BY42 306 aaPredicted RBP28.6■■■□□ 2.17
BEST1-207ENST00000533521 SCN4AP35499 1836 aa28.59■■■□□ 2.17
BEST1-207ENST00000533521 IRS4O14654 1257 aaPredicted RBP28.59■■■□□ 2.17
BEST1-207ENST00000533521 VAMP4O75379 141 aa28.59■■■□□ 2.17
BEST1-207ENST00000533521 SLC4A2P04920 1241 aa28.59■■■□□ 2.17
BEST1-207ENST00000533521 PCCAP05165 728 aaPredicted RBP28.59■■■□□ 2.17
BEST1-207ENST00000533521 SMC1BQ8NDV3 1235 aa28.59■■■□□ 2.17
BEST1-207ENST00000533521 JDP2Q8WYK2 163 aa28.59■■■□□ 2.17
BEST1-207ENST00000533521 MYD88Q99836 296 aa28.59■■■□□ 2.17
BEST1-207ENST00000533521 CWC25Q9NXE8 425 aaPredicted RBP28.59■■■□□ 2.17
BEST1-207ENST00000533521 PI4KAP2A4QPH2 592 aa28.58■■■□□ 2.17
BEST1-207ENST00000533521 PI4KAP1Q8N8J0 262 aa28.58■■■□□ 2.17
BEST1-207ENST00000533521 SUPT20HQ8NEM7 779 aa28.58■■■□□ 2.17
BEST1-207ENST00000533521 MAP3K2Q9Y2U5 619 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms