RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 LINS1Q8NG48 757 aa22.1■■□□□ 1.13
NXF1-216ENST00000533499 JARID2Q92833 1246 aaPredicted RBP22.1■■□□□ 1.13
NXF1-216ENST00000533499 NEURL1BA8MQ27 555 aa22.09■■□□□ 1.13
NXF1-216ENST00000533499 IGKV5-2P06315 115 aa22.09■■□□□ 1.13
NXF1-216ENST00000533499 PTGER2P43116 358 aa22.09■■□□□ 1.13
NXF1-216ENST00000533499 BEND3Q5T5X7 828 aa22.09■■□□□ 1.13
NXF1-216ENST00000533499 TPTE2Q6XPS3 522 aa22.09■■□□□ 1.13
NXF1-216ENST00000533499 NYXQ9GZU5 481 aa22.09■■□□□ 1.13
NXF1-216ENST00000533499 DZIP1LQ8IYY4 767 aaKnown RBP22.08■■□□□ 1.13
NXF1-216ENST00000533499 CCDC191Q8NCU4 936 aa22.08■■□□□ 1.13
NXF1-216ENST00000533499 CCT4P50991 539 aaKnown RBP22.07■■□□□ 1.12
NXF1-216ENST00000533499 ST5P78524 1137 aa22.07■■□□□ 1.12
NXF1-216ENST00000533499 PANK1Q8TE04 598 aa22.07■■□□□ 1.12
NXF1-216ENST00000533499 MS4A1P11836 297 aa22.06■■□□□ 1.12
NXF1-216ENST00000533499 TRIM28Q13263 835 aaKnown RBP22.06■■□□□ 1.12
NXF1-216ENST00000533499 ERFEQ4G0M1 354 aa22.06■■□□□ 1.12
NXF1-216ENST00000533499 PRR5LQ6MZQ0 368 aa22.06■■□□□ 1.12
NXF1-216ENST00000533499 FAM89AQ96GI7 184 aa22.06■■□□□ 1.12
NXF1-216ENST00000533499 C9orf78Q9NZ63 289 aaPredicted RBP22.06■■□□□ 1.12
NXF1-216ENST00000533499 SUPT16HQ9Y5B9 1047 aaKnown RBP22.06■■□□□ 1.12
NXF1-216ENST00000533499 ALDH1L1O75891 902 aa22.05■■□□□ 1.12
NXF1-216ENST00000533499 NTSR2O95665 410 aa22.05■■□□□ 1.12
NXF1-216ENST00000533499 RRP1P56182 461 aaKnown RBP22.05■■□□□ 1.12
NXF1-216ENST00000533499 GCKRQ14397 625 aa22.05■■□□□ 1.12
NXF1-216ENST00000533499 SGIP1Q9BQI5 828 aa22.05■■□□□ 1.12
NXF1-216ENST00000533499 SH3TC1Q8TE82 1336 aa22.05■■□□□ 1.12
NXF1-216ENST00000533499 COL24A1Q17RW2 1714 aa22.04■■□□□ 1.12
NXF1-216ENST00000533499 UBE3BQ7Z3V4 1068 aa22.04■■□□□ 1.12
NXF1-216ENST00000533499 ITPRIPQ8IWB1 547 aa22.04■■□□□ 1.12
NXF1-216ENST00000533499 SYNE4Q8N205 404 aa22.04■■□□□ 1.12
NXF1-216ENST00000533499 TMEM57Q8N5G2 664 aa22.04■■□□□ 1.12
NXF1-216ENST00000533499 ABCC4O15439 1325 aa22.04■■□□□ 1.12
NXF1-216ENST00000533499 PXDNLA1KZ92 1463 aa22.03■■□□□ 1.12
NXF1-216ENST00000533499 RLBP1P12271 317 aa22.02■■□□□ 1.12
NXF1-216ENST00000533499 HCLS1P14317 486 aaPredicted RBP22.02■■□□□ 1.12
NXF1-216ENST00000533499 IRS4O14654 1257 aaPredicted RBP22.01■■□□□ 1.11
NXF1-216ENST00000533499 PCCAP05165 728 aaPredicted RBP22.01■■□□□ 1.11
NXF1-216ENST00000533499 ZBTB38Q8NAP3 1195 aaPredicted RBP22.01■■□□□ 1.11
NXF1-216ENST00000533499 ABCC12Q96J65 1359 aa22■■□□□ 1.11
NXF1-216ENST00000533499 GRM8O00222 908 aa22■■□□□ 1.11
NXF1-216ENST00000533499 C20orf194Q5TEA3 1177 aa22■■□□□ 1.11
NXF1-216ENST00000533499 INTS3Q68E01 1043 aaKnown RBP22■■□□□ 1.11
NXF1-216ENST00000533499 COG6Q9Y2V7 657 aa22■■□□□ 1.11
NXF1-216ENST00000533499 IBTKQ9P2D0 1353 aaPredicted RBP21.99■■□□□ 1.11
NXF1-216ENST00000533499 H7C1W4 665 aa21.98■■□□□ 1.11
NXF1-216ENST00000533499 RNF123Q5XPI4 1314 aa21.98■■□□□ 1.11
NXF1-216ENST00000533499 NRXN2Q9P2S2 1712 aa21.97■■□□□ 1.11
NXF1-216ENST00000533499 NBPF7P0C2Y1 421 aaPredicted RBP21.97■■□□□ 1.11
NXF1-216ENST00000533499 C2CD5Q86YS7 1000 aa21.97■■□□□ 1.11
NXF1-216ENST00000533499 NLRP3Q96P20 1036 aa21.97■■□□□ 1.11
NXF1-216ENST00000533499 BRIP1Q9BX63 1249 aa21.97■■□□□ 1.11
NXF1-216ENST00000533499 FHDC1Q9C0D6 1143 aaPredicted RBP21.97■■□□□ 1.11
NXF1-216ENST00000533499 UBTFL1P0CB47 393 aaPredicted RBP21.96■■□□□ 1.11
NXF1-216ENST00000533499 HSP90B1P14625 803 aaKnown RBP21.96■■□□□ 1.11
NXF1-216ENST00000533499 PDE6BP35913 854 aa21.96■■□□□ 1.11
NXF1-216ENST00000533499 PDE3AQ14432 1141 aa21.96■■□□□ 1.11
NXF1-216ENST00000533499 CCDC85AQ96PX6 553 aaPredicted RBP21.96■■□□□ 1.11
NXF1-216ENST00000533499 USP44Q9H0E7 712 aa21.96■■□□□ 1.11
NXF1-216ENST00000533499 N4BP2Q86UW6 1770 aaPredicted RBP21.96■■□□□ 1.11
NXF1-216ENST00000533499 C10orf71Q711Q0 1435 aa21.96■■□□□ 1.11
NXF1-216ENST00000533499 CHRNA5P30532 468 aa21.95■■□□□ 1.1
NXF1-216ENST00000533499 MEIS3Q99687 375 aa21.95■■□□□ 1.1
NXF1-216ENST00000533499 WWC3Q9ULE0 1092 aa21.95■■□□□ 1.1
NXF1-216ENST00000533499 CHMP3Q9Y3E7 222 aa21.95■■□□□ 1.1
NXF1-216ENST00000533499 H0YIN7 160 aa21.94■■□□□ 1.1
NXF1-216ENST00000533499 PDE8AO60658 829 aa21.94■■□□□ 1.1
NXF1-216ENST00000533499 MVPQ14764 893 aaKnown RBP21.94■■□□□ 1.1
NXF1-216ENST00000533499 SLC10A5Q5PT55 438 aa21.94■■□□□ 1.1
NXF1-216ENST00000533499 C3orf67Q6ZVT6 689 aa21.94■■□□□ 1.1
NXF1-216ENST00000533499 RPGRQ92834 1020 aaKnown RBP21.94■■□□□ 1.1
NXF1-216ENST00000533499 ZNF622Q969S3 477 aaKnown RBP eCLIP21.94■■□□□ 1.1
NXF1-216ENST00000533499 CD2APQ9Y5K6 639 aa21.94■■□□□ 1.1
NXF1-216ENST00000533499 CDHR2Q9BYE9 1310 aa21.94■■□□□ 1.1
NXF1-216ENST00000533499 ANKRD31Q8N7Z5 1873 aa21.94■■□□□ 1.1
NXF1-216ENST00000533499 A0A0G2JLW4 131 aa21.93■■□□□ 1.1
NXF1-216ENST00000533499 LRP5O75197 1615 aa21.93■■□□□ 1.1
NXF1-216ENST00000533499 IRX6P78412 446 aaPredicted RBP21.93■■□□□ 1.1
NXF1-216ENST00000533499 SUCLG2Q96I99 432 aa21.93■■□□□ 1.1
NXF1-216ENST00000533499 TNRC6CQ9HCJ0 1690 aaKnown RBP21.92■■□□□ 1.1
NXF1-216ENST00000533499 GNAI3P08754 354 aa21.92■■□□□ 1.1
NXF1-216ENST00000533499 DPEP1P16444 411 aa21.92■■□□□ 1.1
NXF1-216ENST00000533499 CASP7P55210 303 aa21.92■■□□□ 1.1
NXF1-216ENST00000533499 NLGN2Q8NFZ4 835 aa21.92■■□□□ 1.1
NXF1-216ENST00000533499 DDX19BQ9UMR2 479 aa21.92■■□□□ 1.1
NXF1-216ENST00000533499 DDX60Q8IY21 1712 aaKnown RBP21.92■■□□□ 1.1
NXF1-216ENST00000533499 LRRFIP2Q9Y608 721 aaKnown RBP21.91■■□□□ 1.1
NXF1-216ENST00000533499 CTSWP56202 376 aa21.9■■□□□ 1.1
NXF1-216ENST00000533499 CRBNQ96SW2 442 aa21.9■■□□□ 1.1
NXF1-216ENST00000533499 SYT17Q9BSW7 474 aa21.9■■□□□ 1.1
NXF1-216ENST00000533499 C1orf115Q9H7X2 142 aa21.9■■□□□ 1.1
NXF1-216ENST00000533499 HDAC5Q9UQL6 1122 aa21.9■■□□□ 1.1
NXF1-216ENST00000533499 UTYO14607 1347 aa21.89■■□□□ 1.1
NXF1-216ENST00000533499 TGFB2P61812 414 aa21.89■■□□□ 1.09
NXF1-216ENST00000533499 EPHA10Q5JZY3 1008 aa21.89■■□□□ 1.09
NXF1-216ENST00000533499 PELP1Q8IZL8 1130 aaKnown RBP21.89■■□□□ 1.09
NXF1-216ENST00000533499 KIF13BQ9NQT8 1826 aa21.88■■□□□ 1.09
NXF1-216ENST00000533499 GNAI2P04899 355 aa21.88■■□□□ 1.09
NXF1-216ENST00000533499 CCDC152Q4G0S7 254 aa21.88■■□□□ 1.09
NXF1-216ENST00000533499 LMBR1LQ6UX01 489 aa21.88■■□□□ 1.09
NXF1-216ENST00000533499 DDX46Q7L014 1031 aaKnown RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms