RNA–Protein interactions for RNA: ENST00000533421.2

SF3B2-213, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-213ENST00000533421 TCIRG1Q13488 830 aa15.75■□□□□ 0.11
SF3B2-213ENST00000533421 CCDC93Q567U6 631 aa15.75■□□□□ 0.11
SF3B2-213ENST00000533421 CCDC30Q5VVM6 783 aa15.75■□□□□ 0.11
SF3B2-213ENST00000533421 ANKRD13DQ6ZTN6 518 aa15.75■□□□□ 0.11
SF3B2-213ENST00000533421 C8orf58Q8NAV2 365 aa15.75■□□□□ 0.11
SF3B2-213ENST00000533421 TMX4Q9H1E5 349 aaPredicted RBP15.75■□□□□ 0.11
SF3B2-213ENST00000533421 TAOK3Q9H2K8 898 aa15.75■□□□□ 0.11
SF3B2-213ENST00000533421 SBF1O95248 1867 aa15.75■□□□□ 0.11
SF3B2-213ENST00000533421 CACNA1SQ13698 1873 aa15.74■□□□□ 0.11
SF3B2-213ENST00000533421 NTSR2O95665 410 aa15.74■□□□□ 0.11
SF3B2-213ENST00000533421 RASSF7Q02833 373 aa15.74■□□□□ 0.11
SF3B2-213ENST00000533421 ERFEQ4G0M1 354 aa15.74■□□□□ 0.11
SF3B2-213ENST00000533421 GRIPAP1Q4V328 841 aa15.74■□□□□ 0.11
SF3B2-213ENST00000533421 SUSD4Q5VX71 490 aa15.74■□□□□ 0.11
SF3B2-213ENST00000533421 NUTM1Q86Y26 1132 aa15.74■□□□□ 0.11
SF3B2-213ENST00000533421 RBM17Q96I25 401 aaKnown RBP15.74■□□□□ 0.11
SF3B2-213ENST00000533421 NLRP3Q96P20 1036 aa15.74■□□□□ 0.11
SF3B2-213ENST00000533421 ZNF219Q9P2Y4 722 aaPredicted RBP15.74■□□□□ 0.11
SF3B2-213ENST00000533421 ZNF521Q96K83 1311 aa15.73■□□□□ 0.11
SF3B2-213ENST00000533421 FANCIQ9NVI1 1328 aa15.73■□□□□ 0.11
SF3B2-213ENST00000533421 TCERG1O14776 1098 aaKnown RBP15.73■□□□□ 0.11
SF3B2-213ENST00000533421 DDX58O95786 925 aaKnown RBP15.73■□□□□ 0.11
SF3B2-213ENST00000533421 HSP90B1P14625 803 aaKnown RBP15.73■□□□□ 0.11
SF3B2-213ENST00000533421 CRY2Q49AN0 593 aa15.73■□□□□ 0.11
SF3B2-213ENST00000533421 CC2D2BQ6DHV5 1058 aa15.73■□□□□ 0.11
SF3B2-213ENST00000533421 C16orf71Q8IYS4 520 aaPredicted RBP15.73■□□□□ 0.11
SF3B2-213ENST00000533421 RTKN2Q8IZC4 609 aa15.73■□□□□ 0.11
SF3B2-213ENST00000533421 TSPYL6Q8N831 410 aa15.73■□□□□ 0.11
SF3B2-213ENST00000533421 CDCA7LQ96GN5 454 aa15.73■□□□□ 0.11
SF3B2-213ENST00000533421 STK31Q9BXU1 1019 aa15.73■□□□□ 0.11
SF3B2-213ENST00000533421 FER1L6Q2WGJ9 1857 aa15.72■□□□□ 0.11
SF3B2-213ENST00000533421 DPY19L2Q6NUT2 758 aa15.72■□□□□ 0.11
SF3B2-213ENST00000533421 WDR63Q8IWG1 891 aa15.72■□□□□ 0.11
SF3B2-213ENST00000533421 TRMT112Q9UI30 125 aaKnown RBP15.72■□□□□ 0.11
SF3B2-213ENST00000533421 SLX4Q8IY92 1834 aa15.72■□□□□ 0.11
SF3B2-213ENST00000533421 ABCC12Q96J65 1359 aa15.72■□□□□ 0.11
SF3B2-213ENST00000533421 NFKBIEO00221 500 aa15.71■□□□□ 0.11
SF3B2-213ENST00000533421 RIC3Q7Z5B4 369 aa15.71■□□□□ 0.11
SF3B2-213ENST00000533421 NLRP10Q86W26 655 aa15.71■□□□□ 0.11
SF3B2-213ENST00000533421 SH3TC1Q8TE82 1336 aa15.7■□□□□ 0.1
SF3B2-213ENST00000533421 TNRC6CQ9HCJ0 1690 aaKnown RBP15.7■□□□□ 0.1
SF3B2-213ENST00000533421 HOXA10P31260 410 aaPredicted RBP15.7■□□□□ 0.1
SF3B2-213ENST00000533421 EXOSC9Q06265 439 aaKnown RBP15.7■□□□□ 0.1
SF3B2-213ENST00000533421 SLC10A5Q5PT55 438 aa15.7■□□□□ 0.1
SF3B2-213ENST00000533421 CRAMP1Q96RY5 1269 aa15.7■□□□□ 0.1
SF3B2-213ENST00000533421 CCDC88AQ3V6T2 1871 aa15.69■□□□□ 0.1
SF3B2-213ENST00000533421 TIAM2Q8IVF5 1701 aa15.69■□□□□ 0.1
SF3B2-213ENST00000533421 FKBP4Q02790 459 aaKnown RBP eCLIP15.69■□□□□ 0.1
SF3B2-213ENST00000533421 DICER1Q9UPY3 1922 aaKnown RBP15.68■□□□□ 0.1
SF3B2-213ENST00000533421 GLTPD2A6NH11 291 aa15.68■□□□□ 0.1
SF3B2-213ENST00000533421 KIF3CO14782 793 aa15.68■□□□□ 0.1
SF3B2-213ENST00000533421 TOMM70O94826 608 aa15.68■□□□□ 0.1
SF3B2-213ENST00000533421 TWISTNBQ3B726 338 aaPredicted RBP15.68■□□□□ 0.1
SF3B2-213ENST00000533421 C7orf43Q8WVR3 580 aa15.68■□□□□ 0.1
SF3B2-213ENST00000533421 MYH16Q9H6N6 1097 aa15.68■□□□□ 0.1
SF3B2-213ENST00000533421 TRIM28Q13263 835 aaKnown RBP15.67■□□□□ 0.1
SF3B2-213ENST00000533421 DDX46Q7L014 1031 aaKnown RBP15.67■□□□□ 0.1
SF3B2-213ENST00000533421 PPEF1O14829 653 aaPredicted RBP15.66■□□□□ 0.1
SF3B2-213ENST00000533421 SLFN5Q08AF3 891 aa15.66■□□□□ 0.1
SF3B2-213ENST00000533421 NEXNQ0ZGT2 675 aa15.66■□□□□ 0.1
SF3B2-213ENST00000533421 TMC4Q7Z404 712 aa15.66■□□□□ 0.1
SF3B2-213ENST00000533421 YTHDC1Q96MU7 727 aaKnown RBP15.66■□□□□ 0.1
SF3B2-213ENST00000533421 PSMD1Q99460 953 aa15.66■□□□□ 0.1
SF3B2-213ENST00000533421 ISCA1Q9BUE6 129 aa15.66■□□□□ 0.1
SF3B2-213ENST00000533421 NMRK2Q9NPI5 230 aa15.66■□□□□ 0.1
SF3B2-213ENST00000533421 BBOX1O75936 387 aa15.65■□□□□ 0.1
SF3B2-213ENST00000533421 VEGFAP15692 232 aaPredicted RBP15.65■□□□□ 0.1
SF3B2-213ENST00000533421 PHAXQ9H814 394 aaKnown RBP15.65■□□□□ 0.1
SF3B2-213ENST00000533421 ATP5J2-PTCD1G3V325 749 aa15.64■□□□□ 0.09
SF3B2-213ENST00000533421 CCDC191Q8NCU4 936 aa15.64■□□□□ 0.09
SF3B2-213ENST00000533421 SUPT20HQ8NEM7 779 aa15.64■□□□□ 0.09
SF3B2-213ENST00000533421 RBM46Q8TBY0 533 aaKnown RBP15.64■□□□□ 0.09
SF3B2-213ENST00000533421 JDP2Q8WYK2 163 aa15.64■□□□□ 0.09
SF3B2-213ENST00000533421 ZNF428Q96B54 188 aa15.64■□□□□ 0.09
SF3B2-213ENST00000533421 RRAGCQ9HB90 399 aa15.64■□□□□ 0.09
SF3B2-213ENST00000533421 E9PSI1 815 aa15.63■□□□□ 0.09
SF3B2-213ENST00000533421 HCLS1P14317 486 aaPredicted RBP15.63■□□□□ 0.09
SF3B2-213ENST00000533421 IARSP41252 1262 aaKnown RBP15.63■□□□□ 0.09
SF3B2-213ENST00000533421 ZBTB38Q8NAP3 1195 aaPredicted RBP15.63■□□□□ 0.09
SF3B2-213ENST00000533421 MYD88Q99836 296 aa15.63■□□□□ 0.09
SF3B2-213ENST00000533421 METTL22Q9BUU2 404 aaPredicted RBP15.63■□□□□ 0.09
SF3B2-213ENST00000533421 VPS33BQ9H267 617 aa15.63■□□□□ 0.09
SF3B2-213ENST00000533421 CWC25Q9NXE8 425 aaPredicted RBP15.63■□□□□ 0.09
SF3B2-213ENST00000533421 CACNA1FO60840 1977 aa15.63■□□□□ 0.09
SF3B2-213ENST00000533421 PRELPP51888 382 aa15.62■□□□□ 0.09
SF3B2-213ENST00000533421 FSTL1Q12841 308 aa15.62■□□□□ 0.09
SF3B2-213ENST00000533421 GRAPQ13588 217 aa15.62■□□□□ 0.09
SF3B2-213ENST00000533421 KSR2Q6VAB6 950 aa15.62■□□□□ 0.09
SF3B2-213ENST00000533421 SYNE4Q8N205 404 aa15.62■□□□□ 0.09
SF3B2-213ENST00000533421 GRAPLQ8TC17 118 aaPredicted RBP15.62■□□□□ 0.09
SF3B2-213ENST00000533421 FAM89AQ96GI7 184 aa15.62■□□□□ 0.09
SF3B2-213ENST00000533421 ATP6V0A2Q9Y487 856 aa15.62■□□□□ 0.09
SF3B2-213ENST00000533421 ABCC4O15439 1325 aa15.62■□□□□ 0.09
SF3B2-213ENST00000533421 IQCA1LA6NCM1 817 aa15.61■□□□□ 0.09
SF3B2-213ENST00000533421 IRS4O14654 1257 aaPredicted RBP15.61■□□□□ 0.09
SF3B2-213ENST00000533421 VAMP4O75379 141 aa15.61■□□□□ 0.09
SF3B2-213ENST00000533421 SLC4A2P04920 1241 aa15.61■□□□□ 0.09
SF3B2-213ENST00000533421 HSPA6P17066 643 aa15.61■□□□□ 0.09
SF3B2-213ENST00000533421 ZNF277Q9NRM2 450 aaPredicted RBP15.61■□□□□ 0.09
SF3B2-213ENST00000533421 MAP3K2Q9Y2U5 619 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms