RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 DPY19L2Q6NUT2 758 aa30.49■■■□□ 2.47
SMPD1-209ENST00000533196 RTKN2Q8IZC4 609 aa30.49■■■□□ 2.47
SMPD1-209ENST00000533196 XAGE3Q8WTP9 111 aa30.49■■■□□ 2.47
SMPD1-209ENST00000533196 MBIPQ9NS73 344 aa30.49■■■□□ 2.47
SMPD1-209ENST00000533196 DBF4Q9UBU7 674 aaPredicted RBP30.49■■■□□ 2.47
SMPD1-209ENST00000533196 HOXA10P31260 410 aaPredicted RBP30.48■■■□□ 2.47
SMPD1-209ENST00000533196 UTP14AQ9BVJ6 771 aaKnown RBP30.47■■■□□ 2.47
SMPD1-209ENST00000533196 CHPF2Q9P2E5 772 aa30.47■■■□□ 2.47
SMPD1-209ENST00000533196 AIMP1Q12904 312 aaKnown RBP30.46■■■□□ 2.47
SMPD1-209ENST00000533196 DUSP27Q5VZP5 1158 aa30.46■■■□□ 2.47
SMPD1-209ENST00000533196 CC2D2BQ6DHV5 1058 aa30.46■■■□□ 2.47
SMPD1-209ENST00000533196 RPGRQ92834 1020 aaKnown RBP30.46■■■□□ 2.47
SMPD1-209ENST00000533196 VEGFAP15692 232 aaPredicted RBP30.45■■■□□ 2.47
SMPD1-209ENST00000533196 FKBP4Q02790 459 aaKnown RBP eCLIP30.45■■■□□ 2.47
SMPD1-209ENST00000533196 FSTL1Q12841 308 aa30.45■■■□□ 2.47
SMPD1-209ENST00000533196 TCIRG1Q13488 830 aa30.45■■■□□ 2.47
SMPD1-209ENST00000533196 SLC10A5Q5PT55 438 aa30.45■■■□□ 2.47
SMPD1-209ENST00000533196 WDR90Q96KV7 1748 aa30.44■■■□□ 2.46
SMPD1-209ENST00000533196 ANP32CO43423 234 aa30.43■■■□□ 2.46
SMPD1-209ENST00000533196 GRIPAP1Q4V328 841 aa30.43■■■□□ 2.46
SMPD1-209ENST00000533196 RBM17Q96I25 401 aaKnown RBP30.43■■■□□ 2.46
SMPD1-209ENST00000533196 NLRP3Q96P20 1036 aa30.43■■■□□ 2.46
SMPD1-209ENST00000533196 CRAMP1Q96RY5 1269 aa30.43■■■□□ 2.46
SMPD1-209ENST00000533196 HYPKQ9NX55 129 aa30.43■■■□□ 2.46
SMPD1-209ENST00000533196 APLP1P51693 650 aa30.42■■■□□ 2.46
SMPD1-209ENST00000533196 CCDC184Q52MB2 194 aa30.42■■■□□ 2.46
SMPD1-209ENST00000533196 PLBD2Q8NHP8 589 aa30.42■■■□□ 2.46
SMPD1-209ENST00000533196 CHMP4AQ9BY43 222 aa30.42■■■□□ 2.46
SMPD1-209ENST00000533196 NLRP10Q86W26 655 aa30.41■■■□□ 2.46
SMPD1-209ENST00000533196 CCDC27Q2M243 656 aa30.4■■■□□ 2.46
SMPD1-209ENST00000533196 NCBP3Q53F19 620 aaKnown RBP30.4■■■□□ 2.46
SMPD1-209ENST00000533196 ANKRD13DQ6ZTN6 518 aa30.4■■■□□ 2.46
SMPD1-209ENST00000533196 PSMD1Q99460 953 aa30.39■■■□□ 2.46
SMPD1-209ENST00000533196 SNED1Q8TER0 1413 aa30.39■■■□□ 2.45
SMPD1-209ENST00000533196 SMC1BQ8NDV3 1235 aa30.38■■■□□ 2.45
SMPD1-209ENST00000533196 OLFM4Q6UX06 510 aa30.36■■■□□ 2.45
SMPD1-209ENST00000533196 MRS2Q9HD23 443 aa30.36■■■□□ 2.45
SMPD1-209ENST00000533196 TRMT112Q9UI30 125 aaKnown RBP30.36■■■□□ 2.45
SMPD1-209ENST00000533196 SH3TC1Q8TE82 1336 aa30.36■■■□□ 2.45
SMPD1-209ENST00000533196 CEP350Q5VT06 3117 aa30.35■■■□□ 2.45
SMPD1-209ENST00000533196 C3orf67Q6ZVT6 689 aa30.35■■■□□ 2.45
SMPD1-209ENST00000533196 SYNE4Q8N205 404 aa30.35■■■□□ 2.45
SMPD1-209ENST00000533196 ZNF277Q9NRM2 450 aaPredicted RBP30.35■■■□□ 2.45
SMPD1-209ENST00000533196 LAMB2P55268 1798 aa30.34■■■□□ 2.45
SMPD1-209ENST00000533196 POTECB2RU33 542 aa30.34■■■□□ 2.45
SMPD1-209ENST00000533196 IARSP41252 1262 aaKnown RBP30.34■■■□□ 2.45
SMPD1-209ENST00000533196 ISCA1Q9BUE6 129 aa30.34■■■□□ 2.45
SMPD1-209ENST00000533196 PPEF1O14829 653 aaPredicted RBP30.33■■■□□ 2.45
SMPD1-209ENST00000533196 TMX4Q9H1E5 349 aaPredicted RBP30.32■■■□□ 2.44
SMPD1-209ENST00000533196 SCN4AP35499 1836 aa30.31■■■□□ 2.44
SMPD1-209ENST00000533196 TRIM28Q13263 835 aaKnown RBP30.31■■■□□ 2.44
SMPD1-209ENST00000533196 WWC1Q8IX03 1113 aa30.31■■■□□ 2.44
SMPD1-209ENST00000533196 ELL2O00472 640 aaPredicted RBP30.3■■■□□ 2.44
SMPD1-209ENST00000533196 DDNO94850 711 aaPredicted RBP30.3■■■□□ 2.44
SMPD1-209ENST00000533196 GOLGA2Q08379 1002 aa30.3■■■□□ 2.44
SMPD1-209ENST00000533196 C8orf58Q8NAV2 365 aa30.3■■■□□ 2.44
SMPD1-209ENST00000533196 L3MBTL3Q96JM7 780 aaPredicted RBP30.3■■■□□ 2.44
SMPD1-209ENST00000533196 IL16Q14005 1332 aa30.29■■■□□ 2.44
SMPD1-209ENST00000533196 BBOX1O75936 387 aa30.29■■■□□ 2.44
SMPD1-209ENST00000533196 CCDC30Q5VVM6 783 aa30.29■■■□□ 2.44
SMPD1-209ENST00000533196 ABCC4O15439 1325 aa30.28■■■□□ 2.44
SMPD1-209ENST00000533196 IQCA1LA6NCM1 817 aa30.28■■■□□ 2.44
SMPD1-209ENST00000533196 FZD9O00144 591 aa30.28■■■□□ 2.44
SMPD1-209ENST00000533196 HCLS1P14317 486 aaPredicted RBP30.28■■■□□ 2.44
SMPD1-209ENST00000533196 JDP2Q8WYK2 163 aa30.28■■■□□ 2.44
SMPD1-209ENST00000533196 ATP6V0A2Q9Y487 856 aa30.28■■■□□ 2.44
SMPD1-209ENST00000533196 RIC3Q7Z5B4 369 aa30.27■■■□□ 2.44
SMPD1-209ENST00000533196 DDX46Q7L014 1031 aaKnown RBP30.26■■■□□ 2.43
SMPD1-209ENST00000533196 DDX60Q8IY21 1712 aaKnown RBP30.26■■■□□ 2.43
SMPD1-209ENST00000533196 VPS33BQ9H267 617 aa30.26■■■□□ 2.43
SMPD1-209ENST00000533196 PHAXQ9H814 394 aaKnown RBP30.25■■■□□ 2.43
SMPD1-209ENST00000533196 ATP5J2-PTCD1G3V325 749 aa30.24■■■□□ 2.43
SMPD1-209ENST00000533196 DDX58O95786 925 aaKnown RBP30.24■■■□□ 2.43
SMPD1-209ENST00000533196 TMC4Q7Z404 712 aa30.24■■■□□ 2.43
SMPD1-209ENST00000533196 ZNF541Q9H0D2 1346 aa30.23■■■□□ 2.43
SMPD1-209ENST00000533196 GRAPQ13588 217 aa30.23■■■□□ 2.43
SMPD1-209ENST00000533196 SP8Q8IXZ3 490 aa30.23■■■□□ 2.43
SMPD1-209ENST00000533196 GRAPLQ8TC17 118 aaPredicted RBP30.23■■■□□ 2.43
SMPD1-209ENST00000533196 TCERG1O14776 1098 aaKnown RBP30.22■■■□□ 2.43
SMPD1-209ENST00000533196 HSP90B1P14625 803 aaKnown RBP30.22■■■□□ 2.43
SMPD1-209ENST00000533196 SF3B3Q15393 1217 aaKnown RBP30.22■■■□□ 2.43
SMPD1-209ENST00000533196 SUPT20HQ8NEM7 779 aa30.22■■■□□ 2.43
SMPD1-209ENST00000533196 TSR2Q969E8 191 aaKnown RBP30.22■■■□□ 2.43
SMPD1-209ENST00000533196 GPC2Q8N158 579 aa30.21■■■□□ 2.43
SMPD1-209ENST00000533196 DNAJC5GQ8N7S2 189 aa30.21■■■□□ 2.43
SMPD1-209ENST00000533196 TSPYL6Q8N831 410 aa30.21■■■□□ 2.43
SMPD1-209ENST00000533196 FAM89AQ96GI7 184 aa30.21■■■□□ 2.43
SMPD1-209ENST00000533196 EIF6P56537 245 aaKnown RBP30.2■■■□□ 2.43
SMPD1-209ENST00000533196 LARGE2Q8N3Y3 721 aa30.2■■■□□ 2.43
SMPD1-209ENST00000533196 RTFDC1Q9BY42 306 aaPredicted RBP30.2■■■□□ 2.43
SMPD1-209ENST00000533196 CACNA1FO60840 1977 aa30.19■■■□□ 2.42
SMPD1-209ENST00000533196 WDR63Q8IWG1 891 aa30.19■■■□□ 2.42
SMPD1-209ENST00000533196 ZBTB38Q8NAP3 1195 aaPredicted RBP30.19■■■□□ 2.42
SMPD1-209ENST00000533196 CCDC191Q8NCU4 936 aa30.19■■■□□ 2.42
SMPD1-209ENST00000533196 STK31Q9BXU1 1019 aa30.19■■■□□ 2.42
SMPD1-209ENST00000533196 TWISTNBQ3B726 338 aaPredicted RBP30.18■■■□□ 2.42
SMPD1-209ENST00000533196 CHADLQ6NUI6 762 aa30.18■■■□□ 2.42
SMPD1-209ENST00000533196 TAF1DQ9H5J8 278 aaPredicted RBP30.18■■■□□ 2.42
SMPD1-209ENST00000533196 HACL1Q9UJ83 578 aa30.18■■■□□ 2.42
SMPD1-209ENST00000533196 TAF1P21675 1872 aa30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms