RNA–Protein interactions for RNA: ENST00000533166.5

BANF1-208, Transcript of barrier to autointegration factor 1, human

APPRIS P1 TSL 2 BASIC

Gene BANF1, Length 1,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BANF1-208	ENST00000533166	RIC1	Q4ADV7	1423 aa		32.49	■■■□□ 2.79
BANF1-208	ENST00000533166	FER1L6	Q2WGJ9	1857 aa		32.48	■■■□□ 2.79
BANF1-208	ENST00000533166	KIF3C	O14782	793 aa		32.48	■■■□□ 2.79
BANF1-208	ENST00000533166	NLRP10	Q86W26	655 aa		32.48	■■■□□ 2.79
BANF1-208	ENST00000533166	C7orf43	Q8WVR3	580 aa		32.48	■■■□□ 2.79
BANF1-208	ENST00000533166	NMRK2	Q9NPI5	230 aa		32.48	■■■□□ 2.79
BANF1-208	ENST00000533166	OLFM4	Q6UX06	510 aa		32.47	■■■□□ 2.79
BANF1-208	ENST00000533166	ANKRD13D	Q6ZTN6	518 aa		32.47	■■■□□ 2.79
BANF1-208	ENST00000533166	PLBD2	Q8NHP8	589 aa		32.47	■■■□□ 2.79
BANF1-208	ENST00000533166	TAOK3	Q9H2K8	898 aa		32.45	■■■□□ 2.79
BANF1-208	ENST00000533166	PHAX	Q9H814	394 aa	Known RBP	32.45	■■■□□ 2.79
BANF1-208	ENST00000533166	CCDC88A	Q3V6T2	1871 aa		32.45	■■■□□ 2.79
BANF1-208	ENST00000533166	TIAM2	Q8IVF5	1701 aa		32.44	■■■□□ 2.78
BANF1-208	ENST00000533166	NCBP3	Q53F19	620 aa	Known RBP	32.44	■■■□□ 2.78
BANF1-208	ENST00000533166	SOGA3	Q5TF21	947 aa		32.44	■■■□□ 2.78
BANF1-208	ENST00000533166	RPGR	Q92834	1020 aa	Known RBP	32.44	■■■□□ 2.78
BANF1-208	ENST00000533166	ALDH1B1	P30837	517 aa		32.43	■■■□□ 2.78
BANF1-208	ENST00000533166	CCDC93	Q567U6	631 aa		32.43	■■■□□ 2.78
BANF1-208	ENST00000533166	SYNE4	Q8N205	404 aa		32.43	■■■□□ 2.78
BANF1-208	ENST00000533166	LTBP3	Q9NS15	1303 aa		32.43	■■■□□ 2.78
BANF1-208	ENST00000533166	IL16	Q14005	1332 aa		32.42	■■■□□ 2.78
BANF1-208	ENST00000533166	ATP5J2-PTCD1	G3V325	749 aa		32.41	■■■□□ 2.78
BANF1-208	ENST00000533166	SLC10A5	Q5PT55	438 aa		32.41	■■■□□ 2.78
BANF1-208	ENST00000533166	TRMT112	Q9UI30	125 aa	Known RBP	32.41	■■■□□ 2.78
BANF1-208	ENST00000533166	HOXA10	P31260	410 aa	Predicted RBP	32.4	■■■□□ 2.78
BANF1-208	ENST00000533166	NLRP3	Q96P20	1036 aa		32.4	■■■□□ 2.78
BANF1-208	ENST00000533166	KDM2B	Q8NHM5	1336 aa		32.4	■■■□□ 2.78
BANF1-208	ENST00000533166	ZC3H4	Q9UPT8	1303 aa	Known RBP	32.4	■■■□□ 2.78
BANF1-208	ENST00000533166	TCERG1	O14776	1098 aa	Known RBP	32.39	■■■□□ 2.78
BANF1-208	ENST00000533166	HCLS1	P14317	486 aa	Predicted RBP	32.39	■■■□□ 2.78
BANF1-208	ENST00000533166	CCDC30	Q5VVM6	783 aa		32.39	■■■□□ 2.78
BANF1-208	ENST00000533166	ISCA1	Q9BUE6	129 aa		32.39	■■■□□ 2.78
BANF1-208	ENST00000533166	RNF123	Q5XPI4	1314 aa		32.39	■■■□□ 2.78
BANF1-208	ENST00000533166	GOLGA2	Q08379	1002 aa		32.38	■■■□□ 2.77
BANF1-208	ENST00000533166	RIC3	Q7Z5B4	369 aa		32.38	■■■□□ 2.77
BANF1-208	ENST00000533166	SLC51A	Q86UW1	340 aa		32.38	■■■□□ 2.77
BANF1-208	ENST00000533166	SH3TC1	Q8TE82	1336 aa		32.37	■■■□□ 2.77
BANF1-208	ENST00000533166	FANCI	Q9NVI1	1328 aa		32.37	■■■□□ 2.77
BANF1-208	ENST00000533166	RBM17	Q96I25	401 aa	Known RBP	32.37	■■■□□ 2.77
BANF1-208	ENST00000533166	TWISTNB	Q3B726	338 aa	Predicted RBP	32.36	■■■□□ 2.77
BANF1-208	ENST00000533166	WDR63	Q8IWG1	891 aa		32.36	■■■□□ 2.77
BANF1-208	ENST00000533166	CRAMP1	Q96RY5	1269 aa		32.35	■■■□□ 2.77
BANF1-208	ENST00000533166	RRAGC	Q9HB90	399 aa		32.35	■■■□□ 2.77
BANF1-208	ENST00000533166	FKBP4	Q02790	459 aa	Known RBP eCLIP	32.34	■■■□□ 2.77
BANF1-208	ENST00000533166	LAMB2	P55268	1798 aa		32.34	■■■□□ 2.77
BANF1-208	ENST00000533166	GLTPD2	A6NH11	291 aa		32.33	■■■□□ 2.77
BANF1-208	ENST00000533166	RTKN2	Q8IZC4	609 aa		32.33	■■■□□ 2.77
BANF1-208	ENST00000533166	SPINK5	Q9NQ38	1064 aa	Predicted RBP	32.33	■■■□□ 2.77
BANF1-208	ENST00000533166	ZNF277	Q9NRM2	450 aa	Predicted RBP	32.33	■■■□□ 2.77
BANF1-208	ENST00000533166	DICER1	Q9UPY3	1922 aa	Known RBP	32.33	■■■□□ 2.77
BANF1-208	ENST00000533166	SNED1	Q8TER0	1413 aa		32.33	■■■□□ 2.77
BANF1-208	ENST00000533166	PPEF1	O14829	653 aa	Predicted RBP	32.32	■■■□□ 2.76
BANF1-208	ENST00000533166	RTL5	Q5HYW3	569 aa	Predicted RBP	32.32	■■■□□ 2.76
BANF1-208	ENST00000533166	FAM89A	Q96GI7	184 aa		32.32	■■■□□ 2.76
BANF1-208	ENST00000533166	CHMP4A	Q9BY43	222 aa		32.32	■■■□□ 2.76
BANF1-208	ENST00000533166	ABCC4	O15439	1325 aa		32.31	■■■□□ 2.76
BANF1-208	ENST00000533166	MYD88	Q99836	296 aa		32.31	■■■□□ 2.76
BANF1-208	ENST00000533166	STK31	Q9BXU1	1019 aa		32.3	■■■□□ 2.76
BANF1-208	ENST00000533166	TOMM70	O94826	608 aa		32.29	■■■□□ 2.76
BANF1-208	ENST00000533166	TRIM28	Q13263	835 aa	Known RBP	32.29	■■■□□ 2.76
BANF1-208	ENST00000533166	DDX60	Q8IY21	1712 aa	Known RBP	32.29	■■■□□ 2.76
BANF1-208	ENST00000533166	DDX58	O95786	925 aa	Known RBP	32.27	■■■□□ 2.76
BANF1-208	ENST00000533166	EXOSC9	Q06265	439 aa	Known RBP	32.27	■■■□□ 2.76
BANF1-208	ENST00000533166	G2E3	Q7L622	706 aa		32.27	■■■□□ 2.76
BANF1-208	ENST00000533166	CC2D2B	Q6DHV5	1058 aa		32.26	■■■□□ 2.75
BANF1-208	ENST00000533166	C16orf71	Q8IYS4	520 aa	Predicted RBP	32.26	■■■□□ 2.75
BANF1-208	ENST00000533166	MAP3K2	Q9Y2U5	619 aa		32.26	■■■□□ 2.75
BANF1-208	ENST00000533166	DPY19L2	Q6NUT2	758 aa		32.25	■■■□□ 2.75
BANF1-208	ENST00000533166	METTL22	Q9BUU2	404 aa	Predicted RBP	32.25	■■■□□ 2.75
BANF1-208	ENST00000533166	SLC4A2	P04920	1241 aa		32.24	■■■□□ 2.75
BANF1-208	ENST00000533166	IARS	P41252	1262 aa	Known RBP	32.24	■■■□□ 2.75
BANF1-208	ENST00000533166	PSMD1	Q99460	953 aa		32.24	■■■□□ 2.75
BANF1-208	ENST00000533166	PI4KAP2	A4QPH2	592 aa		32.23	■■■□□ 2.75
BANF1-208	ENST00000533166	VAMP4	O75379	141 aa		32.23	■■■□□ 2.75
BANF1-208	ENST00000533166	KSR2	Q6VAB6	950 aa		32.23	■■■□□ 2.75
BANF1-208	ENST00000533166	DDX46	Q7L014	1031 aa	Known RBP	32.23	■■■□□ 2.75
BANF1-208	ENST00000533166	PI4KAP1	Q8N8J0	262 aa		32.23	■■■□□ 2.75
BANF1-208	ENST00000533166	ATP6V0A2	Q9Y487	856 aa		32.23	■■■□□ 2.75
BANF1-208	ENST00000533166	IRS4	O14654	1257 aa	Predicted RBP	32.22	■■■□□ 2.75
BANF1-208	ENST00000533166	DDN	O94850	711 aa	Predicted RBP	32.22	■■■□□ 2.75
BANF1-208	ENST00000533166	JARID2	Q92833	1246 aa	Predicted RBP	32.22	■■■□□ 2.75
BANF1-208	ENST00000533166	POTEC	B2RU33	542 aa		32.21	■■■□□ 2.75
BANF1-208	ENST00000533166	VEGFA	P15692	232 aa	Predicted RBP	32.21	■■■□□ 2.75
BANF1-208	ENST00000533166	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	32.21	■■■□□ 2.75
BANF1-208	ENST00000533166	TAF1	P21675	1872 aa		32.2	■■■□□ 2.75
BANF1-208	ENST00000533166	HSPA6	P17066	643 aa		32.2	■■■□□ 2.75
BANF1-208	ENST00000533166	GRAP	Q13588	217 aa		32.2	■■■□□ 2.75
BANF1-208	ENST00000533166	CCDC191	Q8NCU4	936 aa		32.2	■■■□□ 2.75
BANF1-208	ENST00000533166	RBM46	Q8TBY0	533 aa	Known RBP	32.2	■■■□□ 2.75
BANF1-208	ENST00000533166	GRAPL	Q8TC17	118 aa	Predicted RBP	32.2	■■■□□ 2.75
BANF1-208	ENST00000533166	MYH16	Q9H6N6	1097 aa		32.2	■■■□□ 2.75
BANF1-208	ENST00000533166	CWC25	Q9NXE8	425 aa	Predicted RBP	32.2	■■■□□ 2.75
BANF1-208	ENST00000533166	ZNF521	Q96K83	1311 aa		32.2	■■■□□ 2.74
BANF1-208	ENST00000533166	ZNF541	Q9H0D2	1346 aa		32.2	■■■□□ 2.74
BANF1-208	ENST00000533166	WDR90	Q96KV7	1748 aa		32.2	■■■□□ 2.74
BANF1-208	ENST00000533166	COL4A5	P29400	1685 aa		32.19	■■■□□ 2.74
BANF1-208	ENST00000533166	BBOX1	O75936	387 aa		32.19	■■■□□ 2.74
BANF1-208	ENST00000533166	SF3B3	Q15393	1217 aa	Known RBP	32.18	■■■□□ 2.74
BANF1-208	ENST00000533166	IGKV5-2	P06315	115 aa		32.17	■■■□□ 2.74
BANF1-208	ENST00000533166	FLII	Q13045	1269 aa		32.17	■■■□□ 2.74

Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms