RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 HMOX1P09601 288 aa15.12■□□□□ 0.01
TRAPPC4-213ENST00000533149 CIAPIN1Q6FI81 312 aa15.12■□□□□ 0.01
TRAPPC4-213ENST00000533149 RGL2O15211 777 aa15.11■□□□□ 0.01
TRAPPC4-213ENST00000533149 NOGQ13253 232 aa15.11■□□□□ 0.01
TRAPPC4-213ENST00000533149 LARGE2Q8N3Y3 721 aa15.11■□□□□ 0.01
TRAPPC4-213ENST00000533149 ADARB2Q9NS39 739 aaKnown RBP15.11■□□□□ 0.01
TRAPPC4-213ENST00000533149 BCORQ6W2J9 1755 aa15.1■□□□□ 0.01
TRAPPC4-213ENST00000533149 GTF2E1P29083 439 aaPredicted RBP15.1■□□□□ 0.01
TRAPPC4-213ENST00000533149 SOX10P56693 466 aa15.1■□□□□ 0.01
TRAPPC4-213ENST00000533149 NIP7Q9Y221 180 aaKnown RBP eCLIP15.1■□□□□ 0.01
TRAPPC4-213ENST00000533149 SNED1Q8TER0 1413 aa15.08■□□□□ 0.01
TRAPPC4-213ENST00000533149 ANP32CO43423 234 aa15.08■□□□□ 0
TRAPPC4-213ENST00000533149 NIM1KQ8IY84 436 aa15.08■□□□□ 0
TRAPPC4-213ENST00000533149 SAGE1Q9NXZ1 904 aa15.08■□□□□ 0
TRAPPC4-213ENST00000533149 GPRC5DQ9NZD1 345 aa15.08■□□□□ 0
TRAPPC4-213ENST00000533149 GNAT3A8MTJ3 354 aa15.07■□□□□ 0
TRAPPC4-213ENST00000533149 CRY2Q49AN0 593 aa15.07■□□□□ 0
TRAPPC4-213ENST00000533149 IL17REQ8NFR9 667 aa15.07■□□□□ 0
TRAPPC4-213ENST00000533149 ZC3H15Q8WU90 426 aaKnown RBP15.07■□□□□ 0
TRAPPC4-213ENST00000533149 TNRC18O15417 2968 aaPredicted RBP15.06■□□□□ 0
TRAPPC4-213ENST00000533149 COL4A5P29400 1685 aa15.06■□□□□ 0
TRAPPC4-213ENST00000533149 FAM177BA6PVY3 158 aa15.06■□□□□ 0
TRAPPC4-213ENST00000533149 GLIS2Q9BZE0 524 aaPredicted RBP15.06■□□□□ 0
TRAPPC4-213ENST00000533149 ZNF408Q9H9D4 720 aa15.06■□□□□ 0
TRAPPC4-213ENST00000533149 PGAP2Q9UHJ9 254 aa15.06■□□□□ 0
TRAPPC4-213ENST00000533149 PER1O15534 1290 aaPredicted RBP15.05■□□□□ -0
TRAPPC4-213ENST00000533149 CDC37L1Q7L3B6 337 aa15.05■□□□□ -0
TRAPPC4-213ENST00000533149 RPGRQ92834 1020 aaKnown RBP15.05■□□□□ -0
TRAPPC4-213ENST00000533149 GCC1Q96CN9 775 aa15.05■□□□□ -0
TRAPPC4-213ENST00000533149 VPS33BQ9H267 617 aa15.05■□□□□ -0
TRAPPC4-213ENST00000533149 KNSTRNQ9Y448 316 aa15.05■□□□□ -0
TRAPPC4-213ENST00000533149 BTBD11A6QL63 1104 aa15.04■□□□□ -0
TRAPPC4-213ENST00000533149 DIAPH1O60610 1272 aaKnown RBP15.04■□□□□ -0
TRAPPC4-213ENST00000533149 PIP4K2AP48426 406 aaPredicted RBP15.04■□□□□ -0
TRAPPC4-213ENST00000533149 GAS2L2Q8NHY3 880 aa15.04■□□□□ -0
TRAPPC4-213ENST00000533149 NYXQ9GZU5 481 aa15.04■□□□□ -0
TRAPPC4-213ENST00000533149 TMX4Q9H1E5 349 aaPredicted RBP15.04■□□□□ -0
TRAPPC4-213ENST00000533149 USP16Q9Y5T5 823 aa15.04■□□□□ -0
TRAPPC4-213ENST00000533149 PPIP5K2O43314 1243 aa15.03■□□□□ -0
TRAPPC4-213ENST00000533149 HOXA10P31260 410 aaPredicted RBP15.03■□□□□ -0
TRAPPC4-213ENST00000533149 HUNKP57058 714 aa15.03■□□□□ -0
TRAPPC4-213ENST00000533149 MAPK8IP2Q13387 824 aaPredicted RBP15.03■□□□□ -0
TRAPPC4-213ENST00000533149 NBPF15Q8N660 670 aa15.03■□□□□ -0
TRAPPC4-213ENST00000533149 CDHR2Q9BYE9 1310 aa15.03■□□□□ -0
TRAPPC4-213ENST00000533149 SNRPA1P09661 255 aaKnown RBP15.02■□□□□ -0
TRAPPC4-213ENST00000533149 CCDC102AQ96A19 550 aa15.02■□□□□ -0
TRAPPC4-213ENST00000533149 ZIC5Q96T25 663 aa15.02■□□□□ -0
TRAPPC4-213ENST00000533149 ZNRF3Q9ULT6 936 aa15.02■□□□□ -0
TRAPPC4-213ENST00000533149 NPC1L1Q9UHC9 1359 aa15.02□□□□□ -0.01
TRAPPC4-213ENST00000533149 GMPSP49915 693 aaPredicted RBP15.01□□□□□ -0.01
TRAPPC4-213ENST00000533149 CXCL9Q07325 125 aa15.01□□□□□ -0.01
TRAPPC4-213ENST00000533149 CNGB1Q14028 1251 aaPredicted RBP15.01□□□□□ -0.01
TRAPPC4-213ENST00000533149 CTU1Q7Z7A3 348 aaKnown RBP15.01□□□□□ -0.01
TRAPPC4-213ENST00000533149 RBM17Q96I25 401 aaKnown RBP15.01□□□□□ -0.01
TRAPPC4-213ENST00000533149 CRAMP1Q96RY5 1269 aa15.01□□□□□ -0.01
TRAPPC4-213ENST00000533149 SIPA1L3O60292 1781 aaPredicted RBP15.01□□□□□ -0.01
TRAPPC4-213ENST00000533149 PPEF1O14829 653 aaPredicted RBP15□□□□□ -0.01
TRAPPC4-213ENST00000533149 KCNQ3O43525 872 aa15□□□□□ -0.01
TRAPPC4-213ENST00000533149 AOC3Q16853 763 aa15□□□□□ -0.01
TRAPPC4-213ENST00000533149 RGMBQ6NW40 437 aa15□□□□□ -0.01
TRAPPC4-213ENST00000533149 SUPT20HQ8NEM7 779 aa15□□□□□ -0.01
TRAPPC4-213ENST00000533149 BCL2L13Q9BXK5 485 aa15□□□□□ -0.01
TRAPPC4-213ENST00000533149 CEMIPQ8WUJ3 1361 aa15□□□□□ -0.01
TRAPPC4-213ENST00000533149 FAM155AB1AL88 458 aaPredicted RBP14.99□□□□□ -0.01
TRAPPC4-213ENST00000533149 TRPA1O75762 1119 aa14.99□□□□□ -0.01
TRAPPC4-213ENST00000533149 TNIP1Q15025 636 aa14.99□□□□□ -0.01
TRAPPC4-213ENST00000533149 PRKRIP1Q9H875 184 aaPredicted RBP14.99□□□□□ -0.01
TRAPPC4-213ENST00000533149 RNF186Q9NXI6 227 aa14.99□□□□□ -0.01
TRAPPC4-213ENST00000533149 HIRAP54198 1017 aaPredicted RBP14.98□□□□□ -0.01
TRAPPC4-213ENST00000533149 KIF23Q02241 960 aaPredicted RBP14.98□□□□□ -0.01
TRAPPC4-213ENST00000533149 PKN2Q16513 984 aaKnown RBP14.98□□□□□ -0.01
TRAPPC4-213ENST00000533149 HLFQ16534 295 aa14.98□□□□□ -0.01
TRAPPC4-213ENST00000533149 NUTM1Q86Y26 1132 aa14.98□□□□□ -0.01
TRAPPC4-213ENST00000533149 ABCC12Q96J65 1359 aa14.98□□□□□ -0.01
TRAPPC4-213ENST00000533149 PRAMEF22A3QJZ6 481 aa14.97□□□□□ -0.01
TRAPPC4-213ENST00000533149 NBPF26B4DH59 902 aa14.97□□□□□ -0.01
TRAPPC4-213ENST00000533149 TCERG1O14776 1098 aaKnown RBP14.97□□□□□ -0.01
TRAPPC4-213ENST00000533149 NBPF10Q6P3W6 841 aaKnown RBP14.97□□□□□ -0.01
TRAPPC4-213ENST00000533149 USP48Q86UV5 1035 aa14.97□□□□□ -0.01
TRAPPC4-213ENST00000533149 REM2Q8IYK8 340 aaPredicted RBP14.97□□□□□ -0.01
TRAPPC4-213ENST00000533149 C2orf69Q8N8R5 385 aa14.97□□□□□ -0.01
TRAPPC4-213ENST00000533149 RIC1Q4ADV7 1423 aa14.97□□□□□ -0.01
TRAPPC4-213ENST00000533149 ERVV-1B6SEH8 477 aa14.96□□□□□ -0.01
TRAPPC4-213ENST00000533149 H7C1D1 291 aa14.96□□□□□ -0.01
TRAPPC4-213ENST00000533149 ZNF157P51786 506 aaPredicted RBP14.96□□□□□ -0.01
TRAPPC4-213ENST00000533149 AMER1Q5JTC6 1135 aaPredicted RBP14.96□□□□□ -0.01
TRAPPC4-213ENST00000533149 CC2D1BQ5T0F9 858 aaKnown RBP14.96□□□□□ -0.01
TRAPPC4-213ENST00000533149 GBA2Q9HCG7 927 aaPredicted RBP14.96□□□□□ -0.01
TRAPPC4-213ENST00000533149 CNOT7Q9UIV1 285 aaKnown RBP14.96□□□□□ -0.01
TRAPPC4-213ENST00000533149 HPS5Q9UPZ3 1129 aa14.96□□□□□ -0.01
TRAPPC4-213ENST00000533149 ATP6V0A2Q9Y487 856 aa14.96□□□□□ -0.01
TRAPPC4-213ENST00000533149 IBTKQ9P2D0 1353 aaPredicted RBP14.95□□□□□ -0.02
TRAPPC4-213ENST00000533149 TRPM4Q8TD43 1214 aa14.95□□□□□ -0.02
TRAPPC4-213ENST00000533149 RTFDC1Q9BY42 306 aaPredicted RBP14.95□□□□□ -0.02
TRAPPC4-213ENST00000533149 CCER2I3L3R5 266 aa14.94□□□□□ -0.02
TRAPPC4-213ENST00000533149 U2SURPO15042 1029 aaKnown RBP14.94□□□□□ -0.02
TRAPPC4-213ENST00000533149 RALBP1Q15311 655 aa14.94□□□□□ -0.02
TRAPPC4-213ENST00000533149 RAD17O75943 681 aa14.93□□□□□ -0.02
TRAPPC4-213ENST00000533149 KRT26Q7Z3Y9 468 aa14.93□□□□□ -0.02
TRAPPC4-213ENST00000533149 CSRNP1Q96S65 589 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms