RNA–Protein interactions for RNA: ENST00000533011.5

CHMP4A-206, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-206ENST00000533011 TAF7Q15545 349 aaPredicted RBP13.4□□□□□ -0.26
CHMP4A-206ENST00000533011 GRIPAP1Q4V328 841 aa13.4□□□□□ -0.26
CHMP4A-206ENST00000533011 NBPF15Q8N660 670 aa13.4□□□□□ -0.26
CHMP4A-206ENST00000533011 FMNL2Q96PY5 1086 aa13.4□□□□□ -0.26
CHMP4A-206ENST00000533011 ZNF277Q9NRM2 450 aaPredicted RBP13.4□□□□□ -0.26
CHMP4A-206ENST00000533011 HEG1Q9ULI3 1381 aa13.4□□□□□ -0.26
CHMP4A-206ENST00000533011 ALDH1B1P30837 517 aa13.39□□□□□ -0.27
CHMP4A-206ENST00000533011 NOGQ13253 232 aa13.39□□□□□ -0.27
CHMP4A-206ENST00000533011 ADAMTS8Q9UP79 889 aa13.39□□□□□ -0.27
CHMP4A-206ENST00000533011 SLX4Q8IY92 1834 aa13.39□□□□□ -0.27
CHMP4A-206ENST00000533011 CASP8AP2Q9UKL3 1982 aa13.38□□□□□ -0.27
CHMP4A-206ENST00000533011 KLRG2A4D1S0 409 aaPredicted RBP13.38□□□□□ -0.27
CHMP4A-206ENST00000533011 ANP32CO43423 234 aa13.38□□□□□ -0.27
CHMP4A-206ENST00000533011 IL6STP40189 918 aaPredicted RBP13.38□□□□□ -0.27
CHMP4A-206ENST00000533011 RIPK4P57078 832 aa13.38□□□□□ -0.27
CHMP4A-206ENST00000533011 CC2D2BQ6DHV5 1058 aa13.38□□□□□ -0.27
CHMP4A-206ENST00000533011 RUNDC1Q96C34 613 aa13.38□□□□□ -0.27
CHMP4A-206ENST00000533011 PSMD1Q99460 953 aa13.38□□□□□ -0.27
CHMP4A-206ENST00000533011 SAGE1Q9NXZ1 904 aa13.38□□□□□ -0.27
CHMP4A-206ENST00000533011 ANKRD31Q8N7Z5 1873 aa13.38□□□□□ -0.27
CHMP4A-206ENST00000533011 LTBP1Q14766 1721 aa13.37□□□□□ -0.27
CHMP4A-206ENST00000533011 KCNQ3O43525 872 aa13.37□□□□□ -0.27
CHMP4A-206ENST00000533011 TMPOP42166 694 aaKnown RBP13.37□□□□□ -0.27
CHMP4A-206ENST00000533011 CCDC146Q8IYE0 955 aa13.37□□□□□ -0.27
CHMP4A-206ENST00000533011 SYNE4Q8N205 404 aa13.37□□□□□ -0.27
CHMP4A-206ENST00000533011 PNISRQ8TF01 805 aaKnown RBP13.37□□□□□ -0.27
CHMP4A-206ENST00000533011 SOX10P56693 466 aa13.36□□□□□ -0.27
CHMP4A-206ENST00000533011 LMOD3Q0VAK6 560 aa13.36□□□□□ -0.27
CHMP4A-206ENST00000533011 CIAPIN1Q6FI81 312 aa13.36□□□□□ -0.27
CHMP4A-206ENST00000533011 CLEC4GQ6UXB4 293 aa13.36□□□□□ -0.27
CHMP4A-206ENST00000533011 CCDC24Q8N4L8 307 aa13.36□□□□□ -0.27
CHMP4A-206ENST00000533011 ARFGEF2Q9Y6D5 1785 aa13.35□□□□□ -0.27
CHMP4A-206ENST00000533011 CELF2O95319 508 aaKnown RBP13.35□□□□□ -0.27
CHMP4A-206ENST00000533011 TPTE2Q6XPS3 522 aa13.35□□□□□ -0.27
CHMP4A-206ENST00000533011 THUMPD2Q9BTF0 503 aaKnown RBP13.35□□□□□ -0.27
CHMP4A-206ENST00000533011 MIS18AQ9NYP9 233 aa13.35□□□□□ -0.27
CHMP4A-206ENST00000533011 TBC1D2BQ9UPU7 963 aa13.35□□□□□ -0.27
CHMP4A-206ENST00000533011 GJA3Q9Y6H8 435 aa13.35□□□□□ -0.27
CHMP4A-206ENST00000533011 TRPM7Q96QT4 1865 aa13.35□□□□□ -0.27
CHMP4A-206ENST00000533011 TRAF5O00463 557 aa13.34□□□□□ -0.27
CHMP4A-206ENST00000533011 RGL2O15211 777 aa13.34□□□□□ -0.27
CHMP4A-206ENST00000533011 SNRPA1P09661 255 aaKnown RBP13.34□□□□□ -0.27
CHMP4A-206ENST00000533011 NEUROD2Q15784 382 aa13.34□□□□□ -0.27
CHMP4A-206ENST00000533011 PKN2Q16513 984 aaKnown RBP13.34□□□□□ -0.27
CHMP4A-206ENST00000533011 NBPF5PQ86XG9 351 aaPredicted RBP13.34□□□□□ -0.27
CHMP4A-206ENST00000533011 ZC3H15Q8WU90 426 aaKnown RBP13.34□□□□□ -0.27
CHMP4A-206ENST00000533011 ADARB2Q9NS39 739 aaKnown RBP13.34□□□□□ -0.27
CHMP4A-206ENST00000533011 PGAP2Q9UHJ9 254 aa13.34□□□□□ -0.27
CHMP4A-206ENST00000533011 RRP7AQ9Y3A4 280 aaKnown RBP13.34□□□□□ -0.27
CHMP4A-206ENST00000533011 COL11A2P13942 1736 aaPredicted RBP13.33□□□□□ -0.27
CHMP4A-206ENST00000533011 KDM3BQ7LBC6 1761 aa13.33□□□□□ -0.28
CHMP4A-206ENST00000533011 EPS15P42566 896 aa13.33□□□□□ -0.28
CHMP4A-206ENST00000533011 SCNN1DP51172 638 aa13.33□□□□□ -0.28
CHMP4A-206ENST00000533011 FMR1Q06787 632 aaKnown RBP eCLIP13.33□□□□□ -0.28
CHMP4A-206ENST00000533011 CCDC184Q52MB2 194 aa13.33□□□□□ -0.28
CHMP4A-206ENST00000533011 VPS33BQ9H267 617 aa13.33□□□□□ -0.28
CHMP4A-206ENST00000533011 USP16Q9Y5T5 823 aa13.33□□□□□ -0.28
CHMP4A-206ENST00000533011 CTU1Q7Z7A3 348 aaKnown RBP13.32□□□□□ -0.28
CHMP4A-206ENST00000533011 REM2Q8IYK8 340 aaPredicted RBP13.32□□□□□ -0.28
CHMP4A-206ENST00000533011 CCDC102AQ96A19 550 aa13.32□□□□□ -0.28
CHMP4A-206ENST00000533011 ZNF652Q9Y2D9 606 aa13.32□□□□□ -0.28
CHMP4A-206ENST00000533011 PRAMEF22A3QJZ6 481 aa13.31□□□□□ -0.28
CHMP4A-206ENST00000533011 CAMTA2O94983 1202 aa13.31□□□□□ -0.28
CHMP4A-206ENST00000533011 A1BGP04217 495 aa13.31□□□□□ -0.28
CHMP4A-206ENST00000533011 CDC37L1Q7L3B6 337 aa13.31□□□□□ -0.28
CHMP4A-206ENST00000533011 BABAM1Q9NWV8 329 aa13.31□□□□□ -0.28
CHMP4A-206ENST00000533011 TRIM35Q9UPQ4 493 aa13.31□□□□□ -0.28
CHMP4A-206ENST00000533011 EIF4A1P60842 406 aaKnown RBP13.3□□□□□ -0.28
CHMP4A-206ENST00000533011 HABP4Q5JVS0 413 aaKnown RBP13.3□□□□□ -0.28
CHMP4A-206ENST00000533011 MRS2Q9HD23 443 aa13.3□□□□□ -0.28
CHMP4A-206ENST00000533011 GPRC5DQ9NZD1 345 aa13.3□□□□□ -0.28
CHMP4A-206ENST00000533011 TSPYL4Q9UJ04 414 aa13.3□□□□□ -0.28
CHMP4A-206ENST00000533011 ZNF330Q9Y3S2 320 aaPredicted RBP13.3□□□□□ -0.28
CHMP4A-206ENST00000533011 APAF1O14727 1248 aa13.29□□□□□ -0.28
CHMP4A-206ENST00000533011 DZIP3Q86Y13 1208 aaKnown RBP13.29□□□□□ -0.28
CHMP4A-206ENST00000533011 LARGE2Q8N3Y3 721 aa13.29□□□□□ -0.28
CHMP4A-206ENST00000533011 LAMB4A4D0S4 1761 aa13.28□□□□□ -0.28
CHMP4A-206ENST00000533011 CDHR2Q9BYE9 1310 aa13.28□□□□□ -0.28
CHMP4A-206ENST00000533011 HUNKP57058 714 aa13.27□□□□□ -0.29
CHMP4A-206ENST00000533011 RGMBQ6NW40 437 aa13.27□□□□□ -0.29
CHMP4A-206ENST00000533011 NIM1KQ8IY84 436 aa13.27□□□□□ -0.29
CHMP4A-206ENST00000533011 RNF186Q9NXI6 227 aa13.27□□□□□ -0.29
CHMP4A-206ENST00000533011 SCN7AQ01118 1682 aa13.27□□□□□ -0.29
CHMP4A-206ENST00000533011 CACNA1SQ13698 1873 aa13.27□□□□□ -0.29
CHMP4A-206ENST00000533011 NBPF26B4DH59 902 aa13.26□□□□□ -0.29
CHMP4A-206ENST00000533011 CHL1O00533 1208 aa13.26□□□□□ -0.29
CHMP4A-206ENST00000533011 TRPA1O75762 1119 aa13.26□□□□□ -0.29
CHMP4A-206ENST00000533011 GTF2E1P29083 439 aaPredicted RBP13.26□□□□□ -0.29
CHMP4A-206ENST00000533011 PIP4K2AP48426 406 aaPredicted RBP13.26□□□□□ -0.29
CHMP4A-206ENST00000533011 NBPF10Q6P3W6 841 aaKnown RBP13.26□□□□□ -0.29
CHMP4A-206ENST00000533011 OLFM4Q6UX06 510 aa13.26□□□□□ -0.29
CHMP4A-206ENST00000533011 GLIS2Q9BZE0 524 aaPredicted RBP13.26□□□□□ -0.29
CHMP4A-206ENST00000533011 TMX4Q9H1E5 349 aaPredicted RBP13.26□□□□□ -0.29
CHMP4A-206ENST00000533011 HPS5Q9UPZ3 1129 aa13.26□□□□□ -0.29
CHMP4A-206ENST00000533011 CALD1Q05682 793 aaKnown RBP13.25□□□□□ -0.29
CHMP4A-206ENST00000533011 CRY2Q49AN0 593 aa13.25□□□□□ -0.29
CHMP4A-206ENST00000533011 ZNF408Q9H9D4 720 aa13.25□□□□□ -0.29
CHMP4A-206ENST00000533011 LAS1LQ9Y4W2 734 aaKnown RBP13.25□□□□□ -0.29
CHMP4A-206ENST00000533011 FAM155AB1AL88 458 aaPredicted RBP13.24□□□□□ -0.29
CHMP4A-206ENST00000533011 KIF23Q02241 960 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms