RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 LRRC27Q9C0I9 530 aa12.44□□□□□ -0.42
COLCA1-203ENST00000532918 KRT23Q9C075 422 aa12.44□□□□□ -0.42
COLCA1-203ENST00000532918 SOS1Q07889 1333 aaPredicted RBP12.44□□□□□ -0.42
COLCA1-203ENST00000532918 GNAQP50148 359 aa12.44□□□□□ -0.42
COLCA1-203ENST00000532918 PARP10Q53GL7 1025 aa12.44□□□□□ -0.42
COLCA1-203ENST00000532918 CAVIN1Q6NZI2 390 aaKnown RBP12.44□□□□□ -0.42
COLCA1-203ENST00000532918 ZNF397Q8NF99 534 aaPredicted RBP12.44□□□□□ -0.42
COLCA1-203ENST00000532918 HOOK2Q96ED9 719 aa12.44□□□□□ -0.42
COLCA1-203ENST00000532918 NAA16Q6N069 864 aaPredicted RBP12.44□□□□□ -0.42
COLCA1-203ENST00000532918 TMTC2Q8N394 836 aa12.44□□□□□ -0.42
COLCA1-203ENST00000532918 SUPT20HQ8NEM7 779 aa12.44□□□□□ -0.42
COLCA1-203ENST00000532918 TSPY3P0CV98 308 aa12.43□□□□□ -0.42
COLCA1-203ENST00000532918 TSPY8P0CW00 308 aa12.43□□□□□ -0.42
COLCA1-203ENST00000532918 CYP7A1P22680 504 aa12.43□□□□□ -0.42
COLCA1-203ENST00000532918 AMPD3Q01432 767 aa12.43□□□□□ -0.42
COLCA1-203ENST00000532918 TMEM67Q5HYA8 995 aa12.43□□□□□ -0.42
COLCA1-203ENST00000532918 NCOA7Q8NI08 942 aa12.43□□□□□ -0.42
COLCA1-203ENST00000532918 CHPF2Q9P2E5 772 aa12.43□□□□□ -0.42
COLCA1-203ENST00000532918 WDR97A6NE52 1622 aa12.43□□□□□ -0.42
COLCA1-203ENST00000532918 CETN1Q12798 172 aa12.43□□□□□ -0.42
COLCA1-203ENST00000532918 CNBD1Q8NA66 436 aa12.43□□□□□ -0.42
COLCA1-203ENST00000532918 DYDC1Q8WWB3 177 aa12.43□□□□□ -0.42
COLCA1-203ENST00000532918 ARHGAP45Q92619 1136 aa12.43□□□□□ -0.42
COLCA1-203ENST00000532918 CALML4Q96GE6 196 aa12.43□□□□□ -0.42
COLCA1-203ENST00000532918 VEZTQ9HBM0 779 aa12.43□□□□□ -0.42
COLCA1-203ENST00000532918 HMG20BQ9P0W2 317 aa12.43□□□□□ -0.42
COLCA1-203ENST00000532918 PLEKHH1Q9ULM0 1364 aa12.43□□□□□ -0.42
COLCA1-203ENST00000532918 ZRSR2Q15696 482 aaKnown RBP12.43□□□□□ -0.42
COLCA1-203ENST00000532918 VTI1AQ96AJ9 217 aa12.43□□□□□ -0.42
COLCA1-203ENST00000532918 DDX11Q96FC9 970 aa12.43□□□□□ -0.42
COLCA1-203ENST00000532918 CNNM2Q9H8M5 875 aa12.43□□□□□ -0.42
COLCA1-203ENST00000532918 EIF5P55010 431 aaKnown RBP12.43□□□□□ -0.42
COLCA1-203ENST00000532918 SLC39A6Q13433 755 aa12.43□□□□□ -0.42
COLCA1-203ENST00000532918 EIF4A2Q14240 407 aaKnown RBP12.43□□□□□ -0.42
COLCA1-203ENST00000532918 TAF3Q5VWG9 929 aa12.43□□□□□ -0.42
COLCA1-203ENST00000532918 SLAIN2Q9P270 581 aa12.43□□□□□ -0.42
COLCA1-203ENST00000532918 CIZ1Q9ULV3 898 aaPredicted RBP12.43□□□□□ -0.42
COLCA1-203ENST00000532918 EIF2AK4Q9P2K8 1649 aaKnown RBP12.43□□□□□ -0.42
COLCA1-203ENST00000532918 PDE6BP35913 854 aa12.43□□□□□ -0.42
COLCA1-203ENST00000532918 BEGAINQ9BUH8 593 aa12.43□□□□□ -0.42
COLCA1-203ENST00000532918 TCP11L1Q9NUJ3 509 aa12.43□□□□□ -0.42
COLCA1-203ENST00000532918 CCDC87Q9NVE4 849 aa12.43□□□□□ -0.42
COLCA1-203ENST00000532918 ZFYVE9O95405 1425 aa12.42□□□□□ -0.42
COLCA1-203ENST00000532918 SHANK2Q9UPX8 1470 aa12.42□□□□□ -0.42
COLCA1-203ENST00000532918 SMARCA5O60264 1052 aaPredicted RBP12.42□□□□□ -0.42
COLCA1-203ENST00000532918 NASPP49321 788 aaPredicted RBP12.42□□□□□ -0.42
COLCA1-203ENST00000532918 MRE11P49959 708 aa12.42□□□□□ -0.42
COLCA1-203ENST00000532918 MAP3K5Q99683 1374 aa12.42□□□□□ -0.42
COLCA1-203ENST00000532918 CCDC181Q5TID7 509 aa12.42□□□□□ -0.42
COLCA1-203ENST00000532918 FLAD1Q8NFF5 587 aa12.42□□□□□ -0.42
COLCA1-203ENST00000532918 NSFL1CQ9UNZ2 370 aaKnown RBP12.42□□□□□ -0.42
COLCA1-203ENST00000532918 YTHDC2Q9H6S0 1430 aaKnown RBP12.42□□□□□ -0.42
COLCA1-203ENST00000532918 FKBP15Q5T1M5 1219 aa12.42□□□□□ -0.42
COLCA1-203ENST00000532918 ERMNQ8TAM6 284 aa12.42□□□□□ -0.42
COLCA1-203ENST00000532918 NEO1Q92859 1461 aa12.42□□□□□ -0.42
COLCA1-203ENST00000532918 CTTNBP2Q8WZ74 1663 aa12.42□□□□□ -0.42
COLCA1-203ENST00000532918 GRM8O00222 908 aa12.42□□□□□ -0.42
COLCA1-203ENST00000532918 EIF6P56537 245 aaKnown RBP12.42□□□□□ -0.42
COLCA1-203ENST00000532918 JAKMIP3Q5VZ66 844 aa12.42□□□□□ -0.42
COLCA1-203ENST00000532918 VPS36Q86VN1 386 aa12.42□□□□□ -0.42
COLCA1-203ENST00000532918 NFATC2IPQ8NCF5 419 aa12.42□□□□□ -0.42
COLCA1-203ENST00000532918 SNRKQ9NRH2 765 aa12.42□□□□□ -0.42
COLCA1-203ENST00000532918 F8W031 263 aaPredicted RBP12.41□□□□□ -0.42
COLCA1-203ENST00000532918 ESR2Q92731 530 aa12.41□□□□□ -0.42
COLCA1-203ENST00000532918 SH2D4AQ9H788 454 aa12.41□□□□□ -0.42
COLCA1-203ENST00000532918 DISP3Q9P2K9 1392 aa12.41□□□□□ -0.42
COLCA1-203ENST00000532918 GNAT2P19087 354 aa12.41□□□□□ -0.42
COLCA1-203ENST00000532918 NUP62CLQ9H1M0 184 aa12.41□□□□□ -0.42
COLCA1-203ENST00000532918 SAMM50Q9Y512 469 aa12.41□□□□□ -0.42
COLCA1-203ENST00000532918 IRS4O14654 1257 aaPredicted RBP12.41□□□□□ -0.42
COLCA1-203ENST00000532918 IARSP41252 1262 aaKnown RBP12.41□□□□□ -0.42
COLCA1-203ENST00000532918 FAM83GA6ND36 823 aa12.41□□□□□ -0.42
COLCA1-203ENST00000532918 CCDC148Q8NFR7 591 aa12.41□□□□□ -0.42
COLCA1-203ENST00000532918 UBA5Q9GZZ9 404 aa12.41□□□□□ -0.42
COLCA1-203ENST00000532918 HOXC9P31274 260 aa12.4□□□□□ -0.42
COLCA1-203ENST00000532918 RNF214Q8ND24 703 aa12.4□□□□□ -0.42
COLCA1-203ENST00000532918 H0YIN7 160 aa12.4□□□□□ -0.42
COLCA1-203ENST00000532918 TRAK2O60296 914 aa12.4□□□□□ -0.42
COLCA1-203ENST00000532918 IQCEQ6IPM2 695 aa12.4□□□□□ -0.42
COLCA1-203ENST00000532918 UPF3BQ9BZI7 483 aaKnown RBP12.4□□□□□ -0.42
COLCA1-203ENST00000532918 SCAND2PQ9GZW5 306 aaPredicted RBP12.4□□□□□ -0.42
COLCA1-203ENST00000532918 VAT1LQ9HCJ6 419 aa12.4□□□□□ -0.42
COLCA1-203ENST00000532918 MAST3O60307 1309 aa12.4□□□□□ -0.42
COLCA1-203ENST00000532918 RBM26Q5T8P6 1007 aaKnown RBP12.4□□□□□ -0.42
COLCA1-203ENST00000532918 LMBR1LQ6UX01 489 aa12.4□□□□□ -0.42
COLCA1-203ENST00000532918 LINS1Q8NG48 757 aa12.4□□□□□ -0.42
COLCA1-203ENST00000532918 STX8Q9UNK0 236 aa12.39□□□□□ -0.43
COLCA1-203ENST00000532918 SLC4A4Q9Y6R1 1079 aa12.39□□□□□ -0.43
COLCA1-203ENST00000532918 NBPF7P0C2Y1 421 aaPredicted RBP12.39□□□□□ -0.43
COLCA1-203ENST00000532918 INCENPQ9NQS7 918 aa12.39□□□□□ -0.43
COLCA1-203ENST00000532918 PICALMQ13492 652 aa12.39□□□□□ -0.43
COLCA1-203ENST00000532918 TAF4BQ92750 862 aa12.39□□□□□ -0.43
COLCA1-203ENST00000532918 ASXL1Q8IXJ9 1541 aa12.39□□□□□ -0.43
COLCA1-203ENST00000532918 RNMTO43148 476 aaKnown RBP12.39□□□□□ -0.43
COLCA1-203ENST00000532918 APBA3O96018 575 aa12.39□□□□□ -0.43
COLCA1-203ENST00000532918 SSR1P43307 286 aaKnown RBP12.39□□□□□ -0.43
COLCA1-203ENST00000532918 SEPT7Q16181 437 aaKnown RBP12.39□□□□□ -0.43
COLCA1-203ENST00000532918 CCDC83Q8IWF9 413 aa12.39□□□□□ -0.43
COLCA1-203ENST00000532918 RRP9O43818 475 aaKnown RBP12.38□□□□□ -0.43
COLCA1-203ENST00000532918 WTAPQ15007 396 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms