RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 BCL2L12Q9HB09 334 aa18.08■□□□□ 0.48
COL16A1-217ENST00000532877 ZNF652Q9Y2D9 606 aa18.08■□□□□ 0.48
COL16A1-217ENST00000532877 NEURL1BA8MQ27 555 aa18.07■□□□□ 0.48
COL16A1-217ENST00000532877 TCIRG1Q13488 830 aa18.07■□□□□ 0.48
COL16A1-217ENST00000532877 CWF19L2Q2TBE0 894 aaKnown RBP18.07■□□□□ 0.48
COL16A1-217ENST00000532877 HSP90AB3PQ58FF7 597 aa18.07■□□□□ 0.48
COL16A1-217ENST00000532877 CLEC4GQ6UXB4 293 aa18.07■□□□□ 0.48
COL16A1-217ENST00000532877 COL23A1Q86Y22 540 aaPredicted RBP18.07■□□□□ 0.48
COL16A1-217ENST00000532877 PELP1Q8IZL8 1130 aaKnown RBP18.07■□□□□ 0.48
COL16A1-217ENST00000532877 IBTKQ9P2D0 1353 aaPredicted RBP18.06■□□□□ 0.48
COL16A1-217ENST00000532877 ATP5J2-PTCD1G3V325 749 aa18.06■□□□□ 0.48
COL16A1-217ENST00000532877 ALDH1L1O75891 902 aa18.06■□□□□ 0.48
COL16A1-217ENST00000532877 KLHL34Q8N239 644 aa18.06■□□□□ 0.48
COL16A1-217ENST00000532877 ISCA1Q9BUE6 129 aa18.06■□□□□ 0.48
COL16A1-217ENST00000532877 GPTP24298 496 aa18.05■□□□□ 0.48
COL16A1-217ENST00000532877 DDX19BQ9UMR2 479 aa18.05■□□□□ 0.48
COL16A1-217ENST00000532877 UBN2Q6ZU65 1347 aa18.04■□□□□ 0.48
COL16A1-217ENST00000532877 GYS1P13807 737 aa18.04■□□□□ 0.48
COL16A1-217ENST00000532877 ZNF34Q8IZ26 560 aa18.04■□□□□ 0.48
COL16A1-217ENST00000532877 EXOC6Q8TAG9 804 aa18.04■□□□□ 0.48
COL16A1-217ENST00000532877 MSH5O43196 834 aa18.03■□□□□ 0.48
COL16A1-217ENST00000532877 TRIM28Q13263 835 aaKnown RBP18.03■□□□□ 0.48
COL16A1-217ENST00000532877 GCKRQ14397 625 aa18.03■□□□□ 0.48
COL16A1-217ENST00000532877 TBC1D9BQ66K14 1250 aa18.03■□□□□ 0.48
COL16A1-217ENST00000532877 CCDC191Q8NCU4 936 aa18.03■□□□□ 0.48
COL16A1-217ENST00000532877 CWC25Q9NXE8 425 aaPredicted RBP18.03■□□□□ 0.48
COL16A1-217ENST00000532877 NIP7Q9Y221 180 aaKnown RBP eCLIP18.03■□□□□ 0.48
COL16A1-217ENST00000532877 FKBP8Q14318 412 aa18.02■□□□□ 0.48
COL16A1-217ENST00000532877 NLRP10Q86W26 655 aa18.02■□□□□ 0.48
COL16A1-217ENST00000532877 MEIS3Q99687 375 aa18.02■□□□□ 0.48
COL16A1-217ENST00000532877 ZBTB7BO15156 539 aaPredicted RBP18.01■□□□□ 0.47
COL16A1-217ENST00000532877 USP44Q9H0E7 712 aa18.01■□□□□ 0.47
COL16A1-217ENST00000532877 CD2APQ9Y5K6 639 aa18.01■□□□□ 0.47
COL16A1-217ENST00000532877 GRM8O00222 908 aa18■□□□□ 0.47
COL16A1-217ENST00000532877 PARP10Q53GL7 1025 aa18■□□□□ 0.47
COL16A1-217ENST00000532877 BICDL1Q6ZP65 573 aa18■□□□□ 0.47
COL16A1-217ENST00000532877 GPBP1L1Q9HC44 474 aaPredicted RBP18■□□□□ 0.47
COL16A1-217ENST00000532877 UTYO14607 1347 aa17.99■□□□□ 0.47
COL16A1-217ENST00000532877 NBPF7P0C2Y1 421 aaPredicted RBP17.99■□□□□ 0.47
COL16A1-217ENST00000532877 NFIXQ14938 502 aa17.99■□□□□ 0.47
COL16A1-217ENST00000532877 CHMP4BQ9H444 224 aaKnown RBP17.99■□□□□ 0.47
COL16A1-217ENST00000532877 ZBTB40Q9NUA8 1239 aa17.99■□□□□ 0.47
COL16A1-217ENST00000532877 C9orf78Q9NZ63 289 aaPredicted RBP17.99■□□□□ 0.47
COL16A1-217ENST00000532877 CARMIL3Q8ND23 1372 aa17.99■□□□□ 0.47
COL16A1-217ENST00000532877 KIF3CO14782 793 aa17.98■□□□□ 0.47
COL16A1-217ENST00000532877 GNAI3P08754 354 aa17.98■□□□□ 0.47
COL16A1-217ENST00000532877 UBTFL1P0CB47 393 aaPredicted RBP17.98■□□□□ 0.47
COL16A1-217ENST00000532877 SUSD4Q5VX71 490 aa17.98■□□□□ 0.47
COL16A1-217ENST00000532877 SETDB2Q96T68 719 aa17.98■□□□□ 0.47
COL16A1-217ENST00000532877 KIAA1551Q9HCM1 1747 aa17.98■□□□□ 0.47
COL16A1-217ENST00000532877 LAMB2P55268 1798 aa17.97■□□□□ 0.47
COL16A1-217ENST00000532877 NTSR2O95665 410 aa17.97■□□□□ 0.47
COL16A1-217ENST00000532877 CASP7P55210 303 aa17.97■□□□□ 0.47
COL16A1-217ENST00000532877 MSL1Q68DK7 614 aa17.97■□□□□ 0.47
COL16A1-217ENST00000532877 UBE3BQ7Z3V4 1068 aa17.97■□□□□ 0.47
COL16A1-217ENST00000532877 NLGN1Q8N2Q7 840 aa17.97■□□□□ 0.47
COL16A1-217ENST00000532877 KIF13BQ9NQT8 1826 aa17.97■□□□□ 0.47
COL16A1-217ENST00000532877 FAM177BA6PVY3 158 aa17.96■□□□□ 0.47
COL16A1-217ENST00000532877 H7C1W4 665 aa17.96■□□□□ 0.47
COL16A1-217ENST00000532877 PCCAP05165 728 aaPredicted RBP17.96■□□□□ 0.47
COL16A1-217ENST00000532877 TM4SF1P30408 202 aa17.96■□□□□ 0.47
COL16A1-217ENST00000532877 AAMPQ13685 434 aa17.96■□□□□ 0.47
COL16A1-217ENST00000532877 RTL5Q5HYW3 569 aaPredicted RBP17.96■□□□□ 0.47
COL16A1-217ENST00000532877 PPP1R42Q7Z4L9 355 aa17.96■□□□□ 0.47
COL16A1-217ENST00000532877 DNAJC5GQ8N7S2 189 aa17.96■□□□□ 0.47
COL16A1-217ENST00000532877 ZBTB38Q8NAP3 1195 aaPredicted RBP17.96■□□□□ 0.47
COL16A1-217ENST00000532877 JARID2Q92833 1246 aaPredicted RBP17.96■□□□□ 0.47
COL16A1-217ENST00000532877 UTP14AQ9BVJ6 771 aaKnown RBP17.96■□□□□ 0.47
COL16A1-217ENST00000532877 C1orf115Q9H7X2 142 aa17.96■□□□□ 0.47
COL16A1-217ENST00000532877 TRMT112Q9UI30 125 aaKnown RBP17.96■□□□□ 0.47
COL16A1-217ENST00000532877 DDR1Q08345 913 aa17.95■□□□□ 0.46
COL16A1-217ENST00000532877 FAM89AQ96GI7 184 aa17.95■□□□□ 0.46
COL16A1-217ENST00000532877 DDX60Q8IY21 1712 aaKnown RBP17.95■□□□□ 0.46
COL16A1-217ENST00000532877 NRXN2Q9P2S2 1712 aa17.95■□□□□ 0.46
COL16A1-217ENST00000532877 GNAI2P04899 355 aa17.94■□□□□ 0.46
COL16A1-217ENST00000532877 ERICH6BQ5W0A0 696 aa17.94■□□□□ 0.46
COL16A1-217ENST00000532877 NBPF5PQ86XG9 351 aaPredicted RBP17.94■□□□□ 0.46
COL16A1-217ENST00000532877 NYXQ9GZU5 481 aa17.94■□□□□ 0.46
COL16A1-217ENST00000532877 LRRFIP2Q9Y608 721 aaKnown RBP17.94■□□□□ 0.46
COL16A1-217ENST00000532877 SH3TC1Q8TE82 1336 aa17.94■□□□□ 0.46
COL16A1-217ENST00000532877 CDHR2Q9BYE9 1310 aa17.94■□□□□ 0.46
COL16A1-217ENST00000532877 POLRMTO00411 1230 aaKnown RBP17.93■□□□□ 0.46
COL16A1-217ENST00000532877 NUTM1Q86Y26 1132 aa17.93■□□□□ 0.46
COL16A1-217ENST00000532877 SYNE4Q8N205 404 aa17.93■□□□□ 0.46
COL16A1-217ENST00000532877 SUCLG2Q96I99 432 aa17.93■□□□□ 0.46
COL16A1-217ENST00000532877 MYH3P11055 1940 aa17.93■□□□□ 0.46
COL16A1-217ENST00000532877 ABCC12Q96J65 1359 aa17.92■□□□□ 0.46
COL16A1-217ENST00000532877 PCNTO95613 3336 aa17.92■□□□□ 0.46
COL16A1-217ENST00000532877 MMP10P09238 476 aa17.92■□□□□ 0.46
COL16A1-217ENST00000532877 KAZALD1Q96I82 304 aa17.92■□□□□ 0.46
COL16A1-217ENST00000532877 HDAC5Q9UQL6 1122 aa17.92■□□□□ 0.46
COL16A1-217ENST00000532877 BRCA1P38398 1863 aaKnown RBP17.91■□□□□ 0.46
COL16A1-217ENST00000532877 SERPINB2P05120 415 aa17.91■□□□□ 0.46
COL16A1-217ENST00000532877 ERFEQ4G0M1 354 aa17.91■□□□□ 0.46
COL16A1-217ENST00000532877 CNBD1Q8NA66 436 aa17.91■□□□□ 0.46
COL16A1-217ENST00000532877 BICC1Q9H694 974 aaKnown RBP17.91■□□□□ 0.46
COL16A1-217ENST00000532877 WDR90Q96KV7 1748 aa17.91■□□□□ 0.46
COL16A1-217ENST00000532877 TNRC6CQ9HCJ0 1690 aaKnown RBP17.9■□□□□ 0.46
COL16A1-217ENST00000532877 IRS4O14654 1257 aaPredicted RBP17.9■□□□□ 0.46
COL16A1-217ENST00000532877 EPHA10Q5JZY3 1008 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms