RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 POTECB2RU33 542 aa23.21■■□□□ 1.31
SMG1-203ENST00000532700 ELL2O00472 640 aaPredicted RBP23.21■■□□□ 1.31
SMG1-203ENST00000532700 TOMM70O94826 608 aa23.21■■□□□ 1.31
SMG1-203ENST00000532700 HSPA6P17066 643 aa23.21■■□□□ 1.31
SMG1-203ENST00000532700 IFT57Q9NWB7 429 aa23.21■■□□□ 1.31
SMG1-203ENST00000532700 KDM2BQ8NHM5 1336 aa23.21■■□□□ 1.31
SMG1-203ENST00000532700 CEP350Q5VT06 3117 aa23.21■■□□□ 1.31
SMG1-203ENST00000532700 ZC3H4Q9UPT8 1303 aaKnown RBP23.2■■□□□ 1.3
SMG1-203ENST00000532700 GLTPD2A6NH11 291 aa23.2■■□□□ 1.3
SMG1-203ENST00000532700 NLRP10Q86W26 655 aa23.2■■□□□ 1.3
SMG1-203ENST00000532700 C8orf58Q8NAV2 365 aa23.2■■□□□ 1.3
SMG1-203ENST00000532700 HOXB7P09629 217 aa23.19■■□□□ 1.3
SMG1-203ENST00000532700 CCDC93Q567U6 631 aa23.18■■□□□ 1.3
SMG1-203ENST00000532700 ZNF277Q9NRM2 450 aaPredicted RBP23.18■■□□□ 1.3
SMG1-203ENST00000532700 HOXA10P31260 410 aaPredicted RBP23.17■■□□□ 1.3
SMG1-203ENST00000532700 TCIRG1Q13488 830 aa23.17■■□□□ 1.3
SMG1-203ENST00000532700 PARP10Q53GL7 1025 aa23.17■■□□□ 1.3
SMG1-203ENST00000532700 TSPYL6Q8N831 410 aa23.17■■□□□ 1.3
SMG1-203ENST00000532700 TSR2Q969E8 191 aaKnown RBP23.17■■□□□ 1.3
SMG1-203ENST00000532700 PHAXQ9H814 394 aaKnown RBP23.17■■□□□ 1.3
SMG1-203ENST00000532700 MRS2Q9HD23 443 aa23.17■■□□□ 1.3
SMG1-203ENST00000532700 HCLS1P14317 486 aaPredicted RBP23.16■■□□□ 1.3
SMG1-203ENST00000532700 GNAI1P63096 354 aa23.16■■□□□ 1.3
SMG1-203ENST00000532700 UTP14AQ9BVJ6 771 aaKnown RBP23.16■■□□□ 1.3
SMG1-203ENST00000532700 TCERG1O14776 1098 aaKnown RBP23.15■■□□□ 1.3
SMG1-203ENST00000532700 FKBP4Q02790 459 aaKnown RBP eCLIP23.15■■□□□ 1.3
SMG1-203ENST00000532700 PPP1R42Q7Z4L9 355 aa23.15■■□□□ 1.3
SMG1-203ENST00000532700 DBF4Q9UBU7 674 aaPredicted RBP23.15■■□□□ 1.3
SMG1-203ENST00000532700 ZNF541Q9H0D2 1346 aa23.14■■□□□ 1.3
SMG1-203ENST00000532700 ATP5J2-PTCD1G3V325 749 aa23.14■■□□□ 1.29
SMG1-203ENST00000532700 DDNO94850 711 aaPredicted RBP23.14■■□□□ 1.29
SMG1-203ENST00000532700 ALDH1B1P30837 517 aa23.14■■□□□ 1.29
SMG1-203ENST00000532700 SLC10A5Q5PT55 438 aa23.14■■□□□ 1.29
SMG1-203ENST00000532700 SOGA3Q5TF21 947 aa23.14■■□□□ 1.29
SMG1-203ENST00000532700 PLBD2Q8NHP8 589 aa23.14■■□□□ 1.29
SMG1-203ENST00000532700 RBM46Q8TBY0 533 aaKnown RBP23.14■■□□□ 1.29
SMG1-203ENST00000532700 RPGRQ92834 1020 aaKnown RBP23.14■■□□□ 1.29
SMG1-203ENST00000532700 HTRA3P83110 453 aa23.13■■□□□ 1.29
SMG1-203ENST00000532700 WWC1Q8IX03 1113 aa23.13■■□□□ 1.29
SMG1-203ENST00000532700 ISCA1Q9BUE6 129 aa23.13■■□□□ 1.29
SMG1-203ENST00000532700 ABCC4O15439 1325 aa23.12■■□□□ 1.29
SMG1-203ENST00000532700 ANP32CO43423 234 aa23.12■■□□□ 1.29
SMG1-203ENST00000532700 ANKRD13DQ6ZTN6 518 aa23.12■■□□□ 1.29
SMG1-203ENST00000532700 CRAMP1Q96RY5 1269 aa23.11■■□□□ 1.29
SMG1-203ENST00000532700 TRMT112Q9UI30 125 aaKnown RBP23.11■■□□□ 1.29
SMG1-203ENST00000532700 LRRC37AA6NMS7 1700 aa23.11■■□□□ 1.29
SMG1-203ENST00000532700 PPEF1O14829 653 aaPredicted RBP23.1■■□□□ 1.29
SMG1-203ENST00000532700 POTEIP0CG38 1075 aa23.1■■□□□ 1.29
SMG1-203ENST00000532700 POTEJP0CG39 1038 aa23.1■■□□□ 1.29
SMG1-203ENST00000532700 HSP90AB3PQ58FF7 597 aa23.1■■□□□ 1.29
SMG1-203ENST00000532700 HYPKQ9NX55 129 aa23.1■■□□□ 1.29
SMG1-203ENST00000532700 LTBP1Q14766 1721 aa23.1■■□□□ 1.29
SMG1-203ENST00000532700 DUOX1Q9NRD9 1551 aa23.1■■□□□ 1.29
SMG1-203ENST00000532700 VEGFAP15692 232 aaPredicted RBP23.09■■□□□ 1.29
SMG1-203ENST00000532700 CCDC27Q2M243 656 aa23.09■■□□□ 1.29
SMG1-203ENST00000532700 C16orf71Q8IYS4 520 aaPredicted RBP23.09■■□□□ 1.29
SMG1-203ENST00000532700 RTKN2Q8IZC4 609 aa23.09■■□□□ 1.29
SMG1-203ENST00000532700 RBM17Q96I25 401 aaKnown RBP23.09■■□□□ 1.29
SMG1-203ENST00000532700 NLRP3Q96P20 1036 aa23.09■■□□□ 1.29
SMG1-203ENST00000532700 SALL2Q9Y467 1007 aaPredicted RBP23.09■■□□□ 1.29
SMG1-203ENST00000532700 IARSP41252 1262 aaKnown RBP23.08■■□□□ 1.29
SMG1-203ENST00000532700 CALD1Q05682 793 aaKnown RBP23.08■■□□□ 1.29
SMG1-203ENST00000532700 RTL5Q5HYW3 569 aaPredicted RBP23.08■■□□□ 1.29
SMG1-203ENST00000532700 FAM89AQ96GI7 184 aa23.08■■□□□ 1.29
SMG1-203ENST00000532700 SH3TC1Q8TE82 1336 aa23.08■■□□□ 1.28
SMG1-203ENST00000532700 RNF123Q5XPI4 1314 aa23.07■■□□□ 1.28
SMG1-203ENST00000532700 SCN4AP35499 1836 aa23.06■■□□□ 1.28
SMG1-203ENST00000532700 DPY19L2Q6NUT2 758 aa23.06■■□□□ 1.28
SMG1-203ENST00000532700 PSMD1Q99460 953 aa23.06■■□□□ 1.28
SMG1-203ENST00000532700 ADAMTSL1Q8N6G6 1762 aa23.06■■□□□ 1.28
SMG1-203ENST00000532700 JARID2Q92833 1246 aaPredicted RBP23.05■■□□□ 1.28
SMG1-203ENST00000532700 SPINK5Q9NQ38 1064 aaPredicted RBP23.05■■□□□ 1.28
SMG1-203ENST00000532700 FSTL1Q12841 308 aa23.04■■□□□ 1.28
SMG1-203ENST00000532700 G2E3Q7L622 706 aa23.04■■□□□ 1.28
SMG1-203ENST00000532700 DNAJC5GQ8N7S2 189 aa23.04■■□□□ 1.28
SMG1-203ENST00000532700 FZD9O00144 591 aa23.03■■□□□ 1.28
SMG1-203ENST00000532700 APLP1P51693 650 aa23.03■■□□□ 1.28
SMG1-203ENST00000532700 MYD88Q99836 296 aa23.03■■□□□ 1.28
SMG1-203ENST00000532700 ATP6V0A2Q9Y487 856 aa23.03■■□□□ 1.28
SMG1-203ENST00000532700 FANCIQ9NVI1 1328 aa23.03■■□□□ 1.28
SMG1-203ENST00000532700 RIC3Q7Z5B4 369 aa23.02■■□□□ 1.28
SMG1-203ENST00000532700 SMC1BQ8NDV3 1235 aa23.02■■□□□ 1.28
SMG1-203ENST00000532700 GOLGA2Q08379 1002 aa23.01■■□□□ 1.27
SMG1-203ENST00000532700 FAM9BQ8IZU0 186 aa23.01■■□□□ 1.27
SMG1-203ENST00000532700 CELF1Q92879 486 aaKnown RBP23.01■■□□□ 1.27
SMG1-203ENST00000532700 L3MBTL3Q96JM7 780 aaPredicted RBP23.01■■□□□ 1.27
SMG1-203ENST00000532700 TRIM28Q13263 835 aaKnown RBP23■■□□□ 1.27
SMG1-203ENST00000532700 CCDC30Q5VVM6 783 aa23■■□□□ 1.27
SMG1-203ENST00000532700 CC2D2BQ6DHV5 1058 aa23■■□□□ 1.27
SMG1-203ENST00000532700 IL16Q14005 1332 aa23■■□□□ 1.27
SMG1-203ENST00000532700 GRAPQ13588 217 aa22.99■■□□□ 1.27
SMG1-203ENST00000532700 AOC3Q16853 763 aa22.99■■□□□ 1.27
SMG1-203ENST00000532700 TWISTNBQ3B726 338 aaPredicted RBP22.99■■□□□ 1.27
SMG1-203ENST00000532700 GRAPLQ8TC17 118 aaPredicted RBP22.99■■□□□ 1.27
SMG1-203ENST00000532700 SPEF2Q9C093 1822 aa22.98■■□□□ 1.27
SMG1-203ENST00000532700 IRS4O14654 1257 aaPredicted RBP22.98■■□□□ 1.27
SMG1-203ENST00000532700 TAF1DQ9H5J8 278 aaPredicted RBP22.98■■□□□ 1.27
SMG1-203ENST00000532700 MAP3K2Q9Y2U5 619 aa22.98■■□□□ 1.27
SMG1-203ENST00000532700 IGKV5-2P06315 115 aa22.97■■□□□ 1.27
SMG1-203ENST00000532700 SF3B3Q15393 1217 aaKnown RBP22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms