RNA–Protein interactions for RNA: ENST00000532446.5

PPP1CA-208, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 5

Gene PPP1CA, Length 1,465 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-208ENST00000532446 AAMPQ13685 434 aa22.63■■□□□ 1.21
PPP1CA-208ENST00000532446 NLRP10Q86W26 655 aa22.63■■□□□ 1.21
PPP1CA-208ENST00000532446 UTYO14607 1347 aa22.62■■□□□ 1.21
PPP1CA-208ENST00000532446 UBN2Q6ZU65 1347 aa22.62■■□□□ 1.21
PPP1CA-208ENST00000532446 NIP7Q9Y221 180 aaKnown RBP eCLIP22.62■■□□□ 1.21
PPP1CA-208ENST00000532446 GRM8O00222 908 aa22.61■■□□□ 1.21
PPP1CA-208ENST00000532446 GNAI3P08754 354 aa22.61■■□□□ 1.21
PPP1CA-208ENST00000532446 TBC1D9BQ66K14 1250 aa22.61■■□□□ 1.21
PPP1CA-208ENST00000532446 C9orf78Q9NZ63 289 aaPredicted RBP22.61■■□□□ 1.21
PPP1CA-208ENST00000532446 COL24A1Q17RW2 1714 aa22.6■■□□□ 1.21
PPP1CA-208ENST00000532446 NBPF7P0C2Y1 421 aaPredicted RBP22.6■■□□□ 1.21
PPP1CA-208ENST00000532446 PARP10Q53GL7 1025 aa22.6■■□□□ 1.21
PPP1CA-208ENST00000532446 MSH5O43196 834 aa22.6■■□□□ 1.21
PPP1CA-208ENST00000532446 GTF3C3Q9Y5Q9 886 aa22.6■■□□□ 1.21
PPP1CA-208ENST00000532446 H7C1W4 665 aa22.59■■□□□ 1.21
PPP1CA-208ENST00000532446 UBTFL1P0CB47 393 aaPredicted RBP22.59■■□□□ 1.21
PPP1CA-208ENST00000532446 CASP7P55210 303 aa22.59■■□□□ 1.21
PPP1CA-208ENST00000532446 SUSD4Q5VX71 490 aa22.58■■□□□ 1.2
PPP1CA-208ENST00000532446 PCCAP05165 728 aaPredicted RBP22.57■■□□□ 1.2
PPP1CA-208ENST00000532446 ZBTB38Q8NAP3 1195 aaPredicted RBP22.57■■□□□ 1.2
PPP1CA-208ENST00000532446 SETDB2Q96T68 719 aa22.57■■□□□ 1.2
PPP1CA-208ENST00000532446 GNAI2P04899 355 aa22.56■■□□□ 1.2
PPP1CA-208ENST00000532446 TM4SF1P30408 202 aa22.56■■□□□ 1.2
PPP1CA-208ENST00000532446 NFIXQ14938 502 aa22.56■■□□□ 1.2
PPP1CA-208ENST00000532446 BICDL1Q6ZP65 573 aa22.56■■□□□ 1.2
PPP1CA-208ENST00000532446 UBE3BQ7Z3V4 1068 aa22.56■■□□□ 1.2
PPP1CA-208ENST00000532446 PPP1R42Q7Z4L9 355 aa22.55■■□□□ 1.2
PPP1CA-208ENST00000532446 NLGN1Q8N2Q7 840 aa22.55■■□□□ 1.2
PPP1CA-208ENST00000532446 JARID2Q92833 1246 aaPredicted RBP22.55■■□□□ 1.2
PPP1CA-208ENST00000532446 UTP14AQ9BVJ6 771 aaKnown RBP22.55■■□□□ 1.2
PPP1CA-208ENST00000532446 C1orf115Q9H7X2 142 aa22.55■■□□□ 1.2
PPP1CA-208ENST00000532446 TRMT112Q9UI30 125 aaKnown RBP22.55■■□□□ 1.2
PPP1CA-208ENST00000532446 NTSR2O95665 410 aa22.54■■□□□ 1.2
PPP1CA-208ENST00000532446 FAM89AQ96GI7 184 aa22.54■■□□□ 1.2
PPP1CA-208ENST00000532446 HDAC5Q9UQL6 1122 aa22.54■■□□□ 1.2
PPP1CA-208ENST00000532446 LRRFIP2Q9Y608 721 aaKnown RBP22.54■■□□□ 1.2
PPP1CA-208ENST00000532446 CARMIL3Q8ND23 1372 aa22.54■■□□□ 1.2
PPP1CA-208ENST00000532446 SUCLG2Q96I99 432 aa22.54■■□□□ 1.2
PPP1CA-208ENST00000532446 PDGFDQ9GZP0 370 aaPredicted RBP22.54■■□□□ 1.2
PPP1CA-208ENST00000532446 PCDHB15Q9Y5E8 787 aa22.54■■□□□ 1.2
PPP1CA-208ENST00000532446 CASZ1Q86V15 1759 aa22.53■■□□□ 1.2
PPP1CA-208ENST00000532446 FAM177BA6PVY3 158 aa22.53■■□□□ 1.2
PPP1CA-208ENST00000532446 RTL5Q5HYW3 569 aaPredicted RBP22.53■■□□□ 1.2
PPP1CA-208ENST00000532446 KAZALD1Q96I82 304 aa22.53■■□□□ 1.2
PPP1CA-208ENST00000532446 CDHR2Q9BYE9 1310 aa22.52■■□□□ 1.2
PPP1CA-208ENST00000532446 SYNE4Q8N205 404 aa22.52■■□□□ 1.2
PPP1CA-208ENST00000532446 SPON1Q9HCB6 807 aa22.52■■□□□ 1.2
PPP1CA-208ENST00000532446 PPP4R2Q9NY27 417 aa22.52■■□□□ 1.2
PPP1CA-208ENST00000532446 SH3TC1Q8TE82 1336 aa22.52■■□□□ 1.2
PPP1CA-208ENST00000532446 SLC16A10Q8TF71 515 aa22.51■■□□□ 1.19
PPP1CA-208ENST00000532446 NYXQ9GZU5 481 aa22.51■■□□□ 1.19
PPP1CA-208ENST00000532446 LAMB2P55268 1798 aa22.51■■□□□ 1.19
PPP1CA-208ENST00000532446 MYH3P11055 1940 aa22.51■■□□□ 1.19
PPP1CA-208ENST00000532446 DDX60Q8IY21 1712 aaKnown RBP22.5■■□□□ 1.19
PPP1CA-208ENST00000532446 DDR1Q08345 913 aa22.5■■□□□ 1.19
PPP1CA-208ENST00000532446 NBPF5PQ86XG9 351 aaPredicted RBP22.5■■□□□ 1.19
PPP1CA-208ENST00000532446 PLA2G12BQ9BX93 195 aa22.5■■□□□ 1.19
PPP1CA-208ENST00000532446 POLRMTO00411 1230 aaKnown RBP22.49■■□□□ 1.19
PPP1CA-208ENST00000532446 MSL1Q68DK7 614 aa22.49■■□□□ 1.19
PPP1CA-208ENST00000532446 CEP85Q6P2H3 762 aa22.49■■□□□ 1.19
PPP1CA-208ENST00000532446 TPTE2Q6XPS3 522 aa22.49■■□□□ 1.19
PPP1CA-208ENST00000532446 NRXN2Q9P2S2 1712 aa22.49■■□□□ 1.19
PPP1CA-208ENST00000532446 IRS4O14654 1257 aaPredicted RBP22.48■■□□□ 1.19
PPP1CA-208ENST00000532446 EPHA10Q5JZY3 1008 aa22.48■■□□□ 1.19
PPP1CA-208ENST00000532446 NUTM1Q86Y26 1132 aa22.48■■□□□ 1.19
PPP1CA-208ENST00000532446 RPAP2Q8IXW5 612 aaPredicted RBP22.48■■□□□ 1.19
PPP1CA-208ENST00000532446 ANKRD44Q8N8A2 993 aa22.48■■□□□ 1.19
PPP1CA-208ENST00000532446 BICC1Q9H694 974 aaKnown RBP22.48■■□□□ 1.19
PPP1CA-208ENST00000532446 SERPINB2P05120 415 aa22.47■■□□□ 1.19
PPP1CA-208ENST00000532446 FOXO4P98177 505 aa22.47■■□□□ 1.19
PPP1CA-208ENST00000532446 SIRT2Q8IXJ6 389 aa22.47■■□□□ 1.19
PPP1CA-208ENST00000532446 MMP10P09238 476 aa22.47■■□□□ 1.19
PPP1CA-208ENST00000532446 MTX1Q13505 466 aa22.47■■□□□ 1.19
PPP1CA-208ENST00000532446 RABL6Q3YEC7 729 aaPredicted RBP22.47■■□□□ 1.19
PPP1CA-208ENST00000532446 ERFEQ4G0M1 354 aa22.47■■□□□ 1.19
PPP1CA-208ENST00000532446 HSP90B1P14625 803 aaKnown RBP22.46■■□□□ 1.19
PPP1CA-208ENST00000532446 ATP8B2P98198 1209 aa22.46■■□□□ 1.19
PPP1CA-208ENST00000532446 SLC10A5Q5PT55 438 aa22.46■■□□□ 1.19
PPP1CA-208ENST00000532446 ABCC12Q96J65 1359 aa22.45■■□□□ 1.18
PPP1CA-208ENST00000532446 PDE8AO60658 829 aa22.45■■□□□ 1.18
PPP1CA-208ENST00000532446 HCLS1P14317 486 aaPredicted RBP22.45■■□□□ 1.18
PPP1CA-208ENST00000532446 GTF2E1P29083 439 aaPredicted RBP22.45■■□□□ 1.18
PPP1CA-208ENST00000532446 PRR5LQ6MZQ0 368 aa22.45■■□□□ 1.18
PPP1CA-208ENST00000532446 CNBD1Q8NA66 436 aa22.45■■□□□ 1.18
PPP1CA-208ENST00000532446 HDAC1Q13547 482 aaPredicted RBP22.44■■□□□ 1.18
PPP1CA-208ENST00000532446 CCDC136Q96JN2 1154 aa22.44■■□□□ 1.18
PPP1CA-208ENST00000532446 PNMA6EA0A0J9YXQ4 647 aa22.43■■□□□ 1.18
PPP1CA-208ENST00000532446 LMBR1LQ6UX01 489 aa22.43■■□□□ 1.18
PPP1CA-208ENST00000532446 PARP3Q9Y6F1 533 aa22.43■■□□□ 1.18
PPP1CA-208ENST00000532446 CSF1RP07333 972 aa22.42■■□□□ 1.18
PPP1CA-208ENST00000532446 CTSWP56202 376 aa22.42■■□□□ 1.18
PPP1CA-208ENST00000532446 B4GALNT3Q6L9W6 998 aa22.42■■□□□ 1.18
PPP1CA-208ENST00000532446 SSH3Q8TE77 659 aa22.42■■□□□ 1.18
PPP1CA-208ENST00000532446 PPP1R1BQ9UD71 204 aaPredicted RBP22.42■■□□□ 1.18
PPP1CA-208ENST00000532446 RIC1Q4ADV7 1423 aa22.42■■□□□ 1.18
PPP1CA-208ENST00000532446 NPHP1O15259 732 aa22.41■■□□□ 1.18
PPP1CA-208ENST00000532446 SRGAP3O43295 1099 aa22.41■■□□□ 1.18
PPP1CA-208ENST00000532446 IGHDP01880 384 aa22.41■■□□□ 1.18
PPP1CA-208ENST00000532446 POLA2Q14181 598 aa22.41■■□□□ 1.18
PPP1CA-208ENST00000532446 TTLL11Q8NHH1 800 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms