RNA–Protein interactions for RNA: ENST00000532354.1

CAVIN3-204, Transcript of caveolae associated protein 3, humanhuman

TSL 2

Gene CAVIN3, Length 1,025 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAVIN3-204ENST00000532354 RIC1Q4ADV7 1423 aa21.53■■□□□ 1.04
CAVIN3-204ENST00000532354 APAF1O14727 1248 aa21.52■■□□□ 1.04
CAVIN3-204ENST00000532354 DNAJC5GQ8N7S2 189 aa21.51■■□□□ 1.03
CAVIN3-204ENST00000532354 SMC1BQ8NDV3 1235 aa21.51■■□□□ 1.03
CAVIN3-204ENST00000532354 WDR90Q96KV7 1748 aa21.5■■□□□ 1.03
CAVIN3-204ENST00000532354 DDNO94850 711 aaPredicted RBP21.5■■□□□ 1.03
CAVIN3-204ENST00000532354 HOXB7P09629 217 aa21.5■■□□□ 1.03
CAVIN3-204ENST00000532354 ZNF853P0CG23 659 aa21.5■■□□□ 1.03
CAVIN3-204ENST00000532354 SLC10A5Q5PT55 438 aa21.5■■□□□ 1.03
CAVIN3-204ENST00000532354 C3orf67Q6ZVT6 689 aa21.5■■□□□ 1.03
CAVIN3-204ENST00000532354 RPGRQ92834 1020 aaKnown RBP21.5■■□□□ 1.03
CAVIN3-204ENST00000532354 UTP14AQ9BVJ6 771 aaKnown RBP21.5■■□□□ 1.03
CAVIN3-204ENST00000532354 ZNF277Q9NRM2 450 aaPredicted RBP21.5■■□□□ 1.03
CAVIN3-204ENST00000532354 ZEB1P37275 1124 aaPredicted RBP21.49■■□□□ 1.03
CAVIN3-204ENST00000532354 HDGFL1Q5TGJ6 251 aa21.49■■□□□ 1.03
CAVIN3-204ENST00000532354 CRAMP1Q96RY5 1269 aa21.49■■□□□ 1.03
CAVIN3-204ENST00000532354 MBIPQ9NS73 344 aa21.49■■□□□ 1.03
CAVIN3-204ENST00000532354 CHPF2Q9P2E5 772 aa21.49■■□□□ 1.03
CAVIN3-204ENST00000532354 TCIRG1Q13488 830 aa21.48■■□□□ 1.03
CAVIN3-204ENST00000532354 HSP90AB3PQ58FF7 597 aa21.48■■□□□ 1.03
CAVIN3-204ENST00000532354 NLRP10Q86W26 655 aa21.48■■□□□ 1.03
CAVIN3-204ENST00000532354 SYNE4Q8N205 404 aa21.48■■□□□ 1.03
CAVIN3-204ENST00000532354 RBM17Q96I25 401 aaKnown RBP21.48■■□□□ 1.03
CAVIN3-204ENST00000532354 NLRP3Q96P20 1036 aa21.48■■□□□ 1.03
CAVIN3-204ENST00000532354 SNED1Q8TER0 1413 aa21.47■■□□□ 1.03
CAVIN3-204ENST00000532354 DUSP27Q5VZP5 1158 aa21.47■■□□□ 1.03
CAVIN3-204ENST00000532354 CC2D2BQ6DHV5 1058 aa21.47■■□□□ 1.03
CAVIN3-204ENST00000532354 PSMD1Q99460 953 aa21.47■■□□□ 1.03
CAVIN3-204ENST00000532354 IARSP41252 1262 aaKnown RBP21.46■■□□□ 1.03
CAVIN3-204ENST00000532354 HTRA3P83110 453 aa21.46■■□□□ 1.03
CAVIN3-204ENST00000532354 CCDC184Q52MB2 194 aa21.46■■□□□ 1.03
CAVIN3-204ENST00000532354 IFT57Q9NWB7 429 aa21.46■■□□□ 1.03
CAVIN3-204ENST00000532354 DBF4Q9UBU7 674 aaPredicted RBP21.46■■□□□ 1.03
CAVIN3-204ENST00000532354 RNF123Q5XPI4 1314 aa21.46■■□□□ 1.03
CAVIN3-204ENST00000532354 GNAI1P63096 354 aa21.44■■□□□ 1.02
CAVIN3-204ENST00000532354 CALD1Q05682 793 aaKnown RBP21.44■■□□□ 1.02
CAVIN3-204ENST00000532354 ANKRD13DQ6ZTN6 518 aa21.44■■□□□ 1.02
CAVIN3-204ENST00000532354 PLBD2Q8NHP8 589 aa21.44■■□□□ 1.02
CAVIN3-204ENST00000532354 GRIPAP1Q4V328 841 aa21.43■■□□□ 1.02
CAVIN3-204ENST00000532354 SLC51AQ86UW1 340 aa21.43■■□□□ 1.02
CAVIN3-204ENST00000532354 L3MBTL3Q96JM7 780 aaPredicted RBP21.43■■□□□ 1.02
CAVIN3-204ENST00000532354 HYPKQ9NX55 129 aa21.43■■□□□ 1.02
CAVIN3-204ENST00000532354 TRMT112Q9UI30 125 aaKnown RBP21.43■■□□□ 1.02
CAVIN3-204ENST00000532354 FZD9O00144 591 aa21.42■■□□□ 1.02
CAVIN3-204ENST00000532354 TCERG1O14776 1098 aaKnown RBP21.42■■□□□ 1.02
CAVIN3-204ENST00000532354 PPEF1O14829 653 aaPredicted RBP21.42■■□□□ 1.02
CAVIN3-204ENST00000532354 HCLS1P14317 486 aaPredicted RBP21.42■■□□□ 1.02
CAVIN3-204ENST00000532354 ANKRD36CQ5JPF3 1778 aa21.42■■□□□ 1.02
CAVIN3-204ENST00000532354 ZNF541Q9H0D2 1346 aa21.42■■□□□ 1.02
CAVIN3-204ENST00000532354 ELL2O00472 640 aaPredicted RBP21.4■■□□□ 1.02
CAVIN3-204ENST00000532354 POTEIP0CG38 1075 aa21.4■■□□□ 1.02
CAVIN3-204ENST00000532354 POTEJP0CG39 1038 aa21.4■■□□□ 1.02
CAVIN3-204ENST00000532354 ISCA1Q9BUE6 129 aa21.4■■□□□ 1.02
CAVIN3-204ENST00000532354 ABCC4O15439 1325 aa21.39■■□□□ 1.01
CAVIN3-204ENST00000532354 SH3TC1Q8TE82 1336 aa21.39■■□□□ 1.01
CAVIN3-204ENST00000532354 IQCA1LA6NCM1 817 aa21.39■■□□□ 1.01
CAVIN3-204ENST00000532354 C8orf58Q8NAV2 365 aa21.39■■□□□ 1.01
CAVIN3-204ENST00000532354 JDP2Q8WYK2 163 aa21.39■■□□□ 1.01
CAVIN3-204ENST00000532354 ZNF428Q96B54 188 aa21.39■■□□□ 1.01
CAVIN3-204ENST00000532354 KLRG1Q96E93 195 aa21.39■■□□□ 1.01
CAVIN3-204ENST00000532354 ATP6V0A2Q9Y487 856 aa21.39■■□□□ 1.01
CAVIN3-204ENST00000532354 ZNF316A6NFI3 1004 aaPredicted RBP21.38■■□□□ 1.01
CAVIN3-204ENST00000532354 BBOX1O75936 387 aa21.38■■□□□ 1.01
CAVIN3-204ENST00000532354 CHADLQ6NUI6 762 aa21.38■■□□□ 1.01
CAVIN3-204ENST00000532354 TAF1DQ9H5J8 278 aaPredicted RBP21.38■■□□□ 1.01
CAVIN3-204ENST00000532354 ATP5J2-PTCD1G3V325 749 aa21.37■■□□□ 1.01
CAVIN3-204ENST00000532354 PHAXQ9H814 394 aaKnown RBP21.37■■□□□ 1.01
CAVIN3-204ENST00000532354 TRIM28Q13263 835 aaKnown RBP21.36■■□□□ 1.01
CAVIN3-204ENST00000532354 DDX46Q7L014 1031 aaKnown RBP21.36■■□□□ 1.01
CAVIN3-204ENST00000532354 SP8Q8IXZ3 490 aa21.36■■□□□ 1.01
CAVIN3-204ENST00000532354 GPC2Q8N158 579 aa21.36■■□□□ 1.01
CAVIN3-204ENST00000532354 FAM89AQ96GI7 184 aa21.36■■□□□ 1.01
CAVIN3-204ENST00000532354 TMX4Q9H1E5 349 aaPredicted RBP21.36■■□□□ 1.01
CAVIN3-204ENST00000532354 COL4A5P29400 1685 aa21.36■■□□□ 1.01
CAVIN3-204ENST00000532354 SCN4AP35499 1836 aa21.35■■□□□ 1.01
CAVIN3-204ENST00000532354 LARGE2Q8N3Y3 721 aa21.35■■□□□ 1.01
CAVIN3-204ENST00000532354 HACL1Q9UJ83 578 aa21.35■■□□□ 1.01
CAVIN3-204ENST00000532354 LAMB2P55268 1798 aa21.34■■□□□ 1.01
CAVIN3-204ENST00000532354 EIF6P56537 245 aaKnown RBP21.34■■□□□ 1.01
CAVIN3-204ENST00000532354 GRAPQ13588 217 aa21.34■■□□□ 1.01
CAVIN3-204ENST00000532354 CCDC27Q2M243 656 aa21.34■■□□□ 1.01
CAVIN3-204ENST00000532354 RIC3Q7Z5B4 369 aa21.34■■□□□ 1.01
CAVIN3-204ENST00000532354 LDHDQ86WU2 507 aa21.34■■□□□ 1.01
CAVIN3-204ENST00000532354 JMYQ8N9B5 988 aa21.34■■□□□ 1.01
CAVIN3-204ENST00000532354 GRAPLQ8TC17 118 aaPredicted RBP21.34■■□□□ 1.01
CAVIN3-204ENST00000532354 GOLGA2Q08379 1002 aa21.33■■□□□ 1.01
CAVIN3-204ENST00000532354 RTFDC1Q9BY42 306 aaPredicted RBP21.33■■□□□ 1.01
CAVIN3-204ENST00000532354 VPS33BQ9H267 617 aa21.33■■□□□ 1.01
CAVIN3-204ENST00000532354 PPIP5K2O43314 1243 aa21.32■■□□□ 1
CAVIN3-204ENST00000532354 EPHX2P34913 555 aa21.32■■□□□ 1
CAVIN3-204ENST00000532354 SF3B3Q15393 1217 aaKnown RBP21.32■■□□□ 1
CAVIN3-204ENST00000532354 WWC1Q8IX03 1113 aa21.32■■□□□ 1
CAVIN3-204ENST00000532354 TSPYL6Q8N831 410 aa21.32■■□□□ 1
CAVIN3-204ENST00000532354 ANP32CO43423 234 aa21.31■■□□□ 1
CAVIN3-204ENST00000532354 AOC3Q16853 763 aa21.31■■□□□ 1
CAVIN3-204ENST00000532354 EAPPQ56P03 285 aaPredicted RBP21.31■■□□□ 1
CAVIN3-204ENST00000532354 RTL5Q5HYW3 569 aaPredicted RBP21.31■■□□□ 1
CAVIN3-204ENST00000532354 CCDC30Q5VVM6 783 aa21.31■■□□□ 1
CAVIN3-204ENST00000532354 MPNDQ8N594 471 aa21.31■■□□□ 1
CAVIN3-204ENST00000532354 TSR2Q969E8 191 aaKnown RBP21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms