RNA–Protein interactions for RNA: ENST00000532313.5

CSRP1-215, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 5,239 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-215ENST00000532313 CARD14Q9BXL6 1004 aa13.78□□□□□ -0.2
CSRP1-215ENST00000532313 CPS1P31327 1500 aa13.78□□□□□ -0.2
CSRP1-215ENST00000532313 CEP170BQ9Y4F5 1589 aaPredicted RBP13.78□□□□□ -0.2
CSRP1-215ENST00000532313 SPON1Q9HCB6 807 aa13.78□□□□□ -0.2
CSRP1-215ENST00000532313 ERBB3P21860 1342 aa13.78□□□□□ -0.2
CSRP1-215ENST00000532313 F6X3S4 739 aa13.77□□□□□ -0.2
CSRP1-215ENST00000532313 UFL1O94874 794 aa13.77□□□□□ -0.2
CSRP1-215ENST00000532313 TNFAIP1Q13829 316 aa13.77□□□□□ -0.2
CSRP1-215ENST00000532313 VEZTQ9HBM0 779 aa13.77□□□□□ -0.2
CSRP1-215ENST00000532313 TPM1P09493 284 aa13.77□□□□□ -0.2
CSRP1-215ENST00000532313 GRM1Q13255 1194 aa13.77□□□□□ -0.2
CSRP1-215ENST00000532313 LMBR1LQ6UX01 489 aa13.77□□□□□ -0.2
CSRP1-215ENST00000532313 DNAI2Q9GZS0 605 aa13.77□□□□□ -0.2
CSRP1-215ENST00000532313 DENND2AQ9ULE3 1009 aa13.77□□□□□ -0.2
CSRP1-215ENST00000532313 SETD1BQ9UPS6 1966 aaKnown RBP13.77□□□□□ -0.2
CSRP1-215ENST00000532313 CCDC96Q2M329 555 aa13.77□□□□□ -0.21
CSRP1-215ENST00000532313 MPNDQ8N594 471 aa13.77□□□□□ -0.21
CSRP1-215ENST00000532313 TBC1D22AQ8WUA7 517 aa13.77□□□□□ -0.21
CSRP1-215ENST00000532313 CTCFLQ8NI51 663 aaPredicted RBP13.77□□□□□ -0.21
CSRP1-215ENST00000532313 IL1RAPL2Q9NP60 686 aa13.77□□□□□ -0.21
CSRP1-215ENST00000532313 HMGB1P09429 215 aaKnown RBP13.77□□□□□ -0.21
CSRP1-215ENST00000532313 MINDY4BA8MYZ0 360 aa13.76□□□□□ -0.21
CSRP1-215ENST00000532313 MX1P20591 662 aa13.76□□□□□ -0.21
CSRP1-215ENST00000532313 SPRYD3Q8NCJ5 442 aa13.76□□□□□ -0.21
CSRP1-215ENST00000532313 KDM4FA0A1W2PPD8 638 aa13.76□□□□□ -0.21
CSRP1-215ENST00000532313 PARD3Q8TEW0 1356 aa13.76□□□□□ -0.21
CSRP1-215ENST00000532313 CHD1LQ86WJ1 897 aa13.76□□□□□ -0.21
CSRP1-215ENST00000532313 JMYQ8N9B5 988 aa13.76□□□□□ -0.21
CSRP1-215ENST00000532313 NUP133Q8WUM0 1156 aa13.76□□□□□ -0.21
CSRP1-215ENST00000532313 ECHDC1Q9NTX5 307 aa13.76□□□□□ -0.21
CSRP1-215ENST00000532313 NAA16Q6N069 864 aaPredicted RBP13.76□□□□□ -0.21
CSRP1-215ENST00000532313 CCDC12Q8WUD4 166 aaPredicted RBP13.76□□□□□ -0.21
CSRP1-215ENST00000532313 DCCP43146 1447 aa13.76□□□□□ -0.21
CSRP1-215ENST00000532313 IL6STP40189 918 aaPredicted RBP13.75□□□□□ -0.21
CSRP1-215ENST00000532313 SLKQ9H2G2 1235 aaPredicted RBP13.75□□□□□ -0.21
CSRP1-215ENST00000532313 C1orf167Q5SNV9 1468 aa13.75□□□□□ -0.21
CSRP1-215ENST00000532313 LDHBP07195 334 aaKnown RBP13.75□□□□□ -0.21
CSRP1-215ENST00000532313 PPP4R3AQ6IN85 833 aa13.75□□□□□ -0.21
CSRP1-215ENST00000532313 METTL22Q9BUU2 404 aaPredicted RBP13.75□□□□□ -0.21
CSRP1-215ENST00000532313 RNF17Q9BXT8 1623 aaKnown RBP13.75□□□□□ -0.21
CSRP1-215ENST00000532313 KIF5BP33176 963 aa13.75□□□□□ -0.21
CSRP1-215ENST00000532313 PPIP5K2O43314 1243 aa13.74□□□□□ -0.21
CSRP1-215ENST00000532313 TRIM21P19474 475 aaKnown RBP13.74□□□□□ -0.21
CSRP1-215ENST00000532313 RBM26Q5T8P6 1007 aaKnown RBP13.74□□□□□ -0.21
CSRP1-215ENST00000532313 BLOC1S2Q6QNY1 142 aa13.74□□□□□ -0.21
CSRP1-215ENST00000532313 IL27Q8NEV9 243 aa13.74□□□□□ -0.21
CSRP1-215ENST00000532313 WDR66Q8TBY9 1149 aa13.74□□□□□ -0.21
CSRP1-215ENST00000532313 UNC13BO14795 1591 aa13.74□□□□□ -0.21
CSRP1-215ENST00000532313 GNAT2P19087 354 aa13.74□□□□□ -0.21
CSRP1-215ENST00000532313 EVI5LQ96CN4 794 aa13.74□□□□□ -0.21
CSRP1-215ENST00000532313 EXOC6BQ9Y2D4 811 aa13.74□□□□□ -0.21
CSRP1-215ENST00000532313 KDM5AP29375 1690 aaKnown RBP13.74□□□□□ -0.21
CSRP1-215ENST00000532313 INO80Q9ULG1 1556 aaPredicted RBP13.74□□□□□ -0.21
CSRP1-215ENST00000532313 TPM3P06753 285 aa13.74□□□□□ -0.21
CSRP1-215ENST00000532313 TTC6Q86TZ1 520 aa13.74□□□□□ -0.21
CSRP1-215ENST00000532313 NBR1Q14596 966 aa13.73□□□□□ -0.21
CSRP1-215ENST00000532313 PICK1Q9NRD5 415 aa13.73□□□□□ -0.21
CSRP1-215ENST00000532313 RIMBP2O15034 1052 aa13.73□□□□□ -0.21
CSRP1-215ENST00000532313 ANXA1P04083 346 aa13.73□□□□□ -0.21
CSRP1-215ENST00000532313 KRT18P05783 430 aaKnown RBP13.73□□□□□ -0.21
CSRP1-215ENST00000532313 ZNF213O14771 459 aa13.73□□□□□ -0.21
CSRP1-215ENST00000532313 DALRD3Q5D0E6 543 aaKnown RBP13.73□□□□□ -0.21
CSRP1-215ENST00000532313 ATP2B4P23634 1241 aa13.72□□□□□ -0.21
CSRP1-215ENST00000532313 OTUD7BQ6GQQ9 843 aa13.72□□□□□ -0.21
CSRP1-215ENST00000532313 CCDC73Q6ZRK6 1079 aa13.72□□□□□ -0.21
CSRP1-215ENST00000532313 VSIG10Q8N0Z9 540 aa13.72□□□□□ -0.21
CSRP1-215ENST00000532313 CREBRFQ8IUR6 639 aa13.72□□□□□ -0.21
CSRP1-215ENST00000532313 GRIN3BO60391 1043 aa13.72□□□□□ -0.21
CSRP1-215ENST00000532313 ZSCAN31Q96LW9 406 aaPredicted RBP13.72□□□□□ -0.21
CSRP1-215ENST00000532313 ZNF396Q96N95 335 aaPredicted RBP13.72□□□□□ -0.21
CSRP1-215ENST00000532313 BOLA2Q9H3K6 86 aa13.72□□□□□ -0.21
CSRP1-215ENST00000532313 CDC42BPBQ9Y5S2 1711 aa13.72□□□□□ -0.21
CSRP1-215ENST00000532313 HIBADHP31937 336 aaKnown RBP13.72□□□□□ -0.21
CSRP1-215ENST00000532313 MSL1Q68DK7 614 aa13.72□□□□□ -0.21
CSRP1-215ENST00000532313 BMP2KQ9NSY1 1161 aaPredicted RBP13.72□□□□□ -0.21
CSRP1-215ENST00000532313 VPS37CA5D8V6 355 aaPredicted RBP13.71□□□□□ -0.21
CSRP1-215ENST00000532313 PES1O00541 588 aaKnown RBP13.71□□□□□ -0.21
CSRP1-215ENST00000532313 RANBP6O60518 1105 aaKnown RBP13.71□□□□□ -0.21
CSRP1-215ENST00000532313 RABEP1Q15276 862 aa13.71□□□□□ -0.21
CSRP1-215ENST00000532313 CRB1P82279 1406 aa13.71□□□□□ -0.21
CSRP1-215ENST00000532313 DIP2AQ14689 1571 aa13.71□□□□□ -0.21
CSRP1-215ENST00000532313 TULP4Q9NRJ4 1543 aa13.71□□□□□ -0.21
CSRP1-215ENST00000532313 NUCB2P80303 420 aa13.71□□□□□ -0.21
CSRP1-215ENST00000532313 CYP7A1P22680 504 aa13.71□□□□□ -0.21
CSRP1-215ENST00000532313 NOP58Q9Y2X3 529 aaKnown RBP13.71□□□□□ -0.21
CSRP1-215ENST00000532313 ALKQ9UM73 1620 aa13.71□□□□□ -0.21
CSRP1-215ENST00000532313 CATIPQ7Z7H3 387 aa13.71□□□□□ -0.22
CSRP1-215ENST00000532313 ZNF496Q96IT1 587 aaPredicted RBP13.71□□□□□ -0.22
CSRP1-215ENST00000532313 KIF22Q14807 665 aa13.7□□□□□ -0.22
CSRP1-215ENST00000532313 CRKLP46109 303 aaKnown RBP13.7□□□□□ -0.22
CSRP1-215ENST00000532313 NUTM1Q86Y26 1132 aa13.7□□□□□ -0.22
CSRP1-215ENST00000532313 RTKN2Q8IZC4 609 aa13.7□□□□□ -0.22
CSRP1-215ENST00000532313 CCDC8Q9H0W5 538 aaPredicted RBP13.7□□□□□ -0.22
CSRP1-215ENST00000532313 TMOD4Q9NZQ9 345 aa13.7□□□□□ -0.22
CSRP1-215ENST00000532313 F8W031 263 aaPredicted RBP13.7□□□□□ -0.22
CSRP1-215ENST00000532313 TSPY2A6NKD2 308 aa13.7□□□□□ -0.22
CSRP1-215ENST00000532313 CCDC93Q567U6 631 aa13.7□□□□□ -0.22
CSRP1-215ENST00000532313 DCPSQ96C86 337 aaKnown RBP13.7□□□□□ -0.22
CSRP1-215ENST00000532313 ABCA6Q8N139 1617 aa13.7□□□□□ -0.22
CSRP1-215ENST00000532313 EAPPQ56P03 285 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms