RNA–Protein interactions for RNA: ENST00000532197.1

NECTIN1-207, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 2

Gene NECTIN1, Length 452 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-207ENST00000532197 ZNF521Q96K83 1311 aa11.71□□□□□ -0.53
NECTIN1-207ENST00000532197 FANCIQ9NVI1 1328 aa11.71□□□□□ -0.53
NECTIN1-207ENST00000532197 ELL2O00472 640 aaPredicted RBP11.71□□□□□ -0.53
NECTIN1-207ENST00000532197 NTSR2O95665 410 aa11.71□□□□□ -0.53
NECTIN1-207ENST00000532197 NPR1P16066 1061 aa11.71□□□□□ -0.53
NECTIN1-207ENST00000532197 LMNB1P20700 586 aa11.71□□□□□ -0.53
NECTIN1-207ENST00000532197 GPTP24298 496 aa11.71□□□□□ -0.53
NECTIN1-207ENST00000532197 GOLGA2Q08379 1002 aa11.71□□□□□ -0.53
NECTIN1-207ENST00000532197 TRIM28Q13263 835 aaKnown RBP11.71□□□□□ -0.53
NECTIN1-207ENST00000532197 TWISTNBQ3B726 338 aaPredicted RBP11.71□□□□□ -0.53
NECTIN1-207ENST00000532197 CRY2Q49AN0 593 aa11.71□□□□□ -0.53
NECTIN1-207ENST00000532197 STK31Q9BXU1 1019 aa11.71□□□□□ -0.53
NECTIN1-207ENST00000532197 NMRK2Q9NPI5 230 aa11.71□□□□□ -0.53
NECTIN1-207ENST00000532197 DDX60Q8IY21 1712 aaKnown RBP11.7□□□□□ -0.54
NECTIN1-207ENST00000532197 ALDH1B1P30837 517 aa11.7□□□□□ -0.54
NECTIN1-207ENST00000532197 SLC10A5Q5PT55 438 aa11.7□□□□□ -0.54
NECTIN1-207ENST00000532197 SOGA3Q5TF21 947 aa11.7□□□□□ -0.54
NECTIN1-207ENST00000532197 SUSD4Q5VX71 490 aa11.7□□□□□ -0.54
NECTIN1-207ENST00000532197 NLRP10Q86W26 655 aa11.7□□□□□ -0.54
NECTIN1-207ENST00000532197 C16orf71Q8IYS4 520 aaPredicted RBP11.7□□□□□ -0.54
NECTIN1-207ENST00000532197 TSPYL6Q8N831 410 aa11.7□□□□□ -0.54
NECTIN1-207ENST00000532197 ZNF622Q969S3 477 aaKnown RBP eCLIP11.7□□□□□ -0.54
NECTIN1-207ENST00000532197 UTP14AQ9BVJ6 771 aaKnown RBP11.7□□□□□ -0.54
NECTIN1-207ENST00000532197 CEP350Q5VT06 3117 aa11.7□□□□□ -0.54
NECTIN1-207ENST00000532197 ABCC12Q96J65 1359 aa11.69□□□□□ -0.54
NECTIN1-207ENST00000532197 FAM177BA6PVY3 158 aa11.69□□□□□ -0.54
NECTIN1-207ENST00000532197 DDX58O95786 925 aaKnown RBP11.69□□□□□ -0.54
NECTIN1-207ENST00000532197 HOXA10P31260 410 aaPredicted RBP11.69□□□□□ -0.54
NECTIN1-207ENST00000532197 ERFEQ4G0M1 354 aa11.69□□□□□ -0.54
NECTIN1-207ENST00000532197 DIEXFQ68CQ4 756 aaKnown RBP11.69□□□□□ -0.54
NECTIN1-207ENST00000532197 CCDC24Q8N4L8 307 aa11.69□□□□□ -0.54
NECTIN1-207ENST00000532197 SALL2Q9Y467 1007 aaPredicted RBP11.69□□□□□ -0.54
NECTIN1-207ENST00000532197 MYH3P11055 1940 aa11.68□□□□□ -0.54
NECTIN1-207ENST00000532197 LTBP3Q9NS15 1303 aa11.68□□□□□ -0.54
NECTIN1-207ENST00000532197 GLTPD2A6NH11 291 aa11.68□□□□□ -0.54
NECTIN1-207ENST00000532197 IFFO2Q5TF58 517 aa11.68□□□□□ -0.54
NECTIN1-207ENST00000532197 PRPF40BQ6NWY9 871 aaKnown RBP11.68□□□□□ -0.54
NECTIN1-207ENST00000532197 NUTM1Q86Y26 1132 aa11.68□□□□□ -0.54
NECTIN1-207ENST00000532197 ISCA1Q9BUE6 129 aa11.68□□□□□ -0.54
NECTIN1-207ENST00000532197 TIAM2Q8IVF5 1701 aa11.68□□□□□ -0.54
NECTIN1-207ENST00000532197 SH3TC1Q8TE82 1336 aa11.67□□□□□ -0.54
NECTIN1-207ENST00000532197 VAMP4O75379 141 aa11.67□□□□□ -0.54
NECTIN1-207ENST00000532197 HSP90B1P14625 803 aaKnown RBP11.67□□□□□ -0.54
NECTIN1-207ENST00000532197 RIC3Q7Z5B4 369 aa11.67□□□□□ -0.54
NECTIN1-207ENST00000532197 DNAJC5GQ8N7S2 189 aa11.67□□□□□ -0.54
NECTIN1-207ENST00000532197 NLRP3Q96P20 1036 aa11.67□□□□□ -0.54
NECTIN1-207ENST00000532197 CRAMP1Q96RY5 1269 aa11.67□□□□□ -0.54
NECTIN1-207ENST00000532197 PHAXQ9H814 394 aaKnown RBP11.67□□□□□ -0.54
NECTIN1-207ENST00000532197 TRMT112Q9UI30 125 aaKnown RBP11.67□□□□□ -0.54
NECTIN1-207ENST00000532197 E9PSI1 815 aa11.66□□□□□ -0.54
NECTIN1-207ENST00000532197 NFKBIEO00221 500 aa11.66□□□□□ -0.54
NECTIN1-207ENST00000532197 SLC4A2P04920 1241 aa11.66□□□□□ -0.54
NECTIN1-207ENST00000532197 VEGFAP15692 232 aaPredicted RBP11.66□□□□□ -0.54
NECTIN1-207ENST00000532197 EXOSC9Q06265 439 aaKnown RBP11.66□□□□□ -0.54
NECTIN1-207ENST00000532197 GRIPAP1Q4V328 841 aa11.66□□□□□ -0.54
NECTIN1-207ENST00000532197 CC2D2BQ6DHV5 1058 aa11.66□□□□□ -0.54
NECTIN1-207ENST00000532197 KSR2Q6VAB6 950 aa11.66□□□□□ -0.54
NECTIN1-207ENST00000532197 CCDC191Q8NCU4 936 aa11.66□□□□□ -0.54
NECTIN1-207ENST00000532197 SMC1BQ8NDV3 1235 aa11.66□□□□□ -0.54
NECTIN1-207ENST00000532197 C7orf43Q8WVR3 580 aa11.66□□□□□ -0.54
NECTIN1-207ENST00000532197 RPGRQ92834 1020 aaKnown RBP11.66□□□□□ -0.54
NECTIN1-207ENST00000532197 SPINK5Q9NQ38 1064 aaPredicted RBP11.66□□□□□ -0.54
NECTIN1-207ENST00000532197 C21orf2O43822 256 aa11.65□□□□□ -0.54
NECTIN1-207ENST00000532197 RASSF7Q02833 373 aa11.65□□□□□ -0.54
NECTIN1-207ENST00000532197 DPY19L2Q6NUT2 758 aa11.65□□□□□ -0.54
NECTIN1-207ENST00000532197 RBM17Q96I25 401 aaKnown RBP11.65□□□□□ -0.54
NECTIN1-207ENST00000532197 METTL22Q9BUU2 404 aaPredicted RBP11.65□□□□□ -0.54
NECTIN1-207ENST00000532197 RRAGCQ9HB90 399 aa11.65□□□□□ -0.54
NECTIN1-207ENST00000532197 TAF1P21675 1872 aa11.64□□□□□ -0.55
NECTIN1-207ENST00000532197 PRELPP51888 382 aa11.64□□□□□ -0.55
NECTIN1-207ENST00000532197 CCDC93Q567U6 631 aa11.64□□□□□ -0.55
NECTIN1-207ENST00000532197 RTKN2Q8IZC4 609 aa11.64□□□□□ -0.55
NECTIN1-207ENST00000532197 ZNF428Q96B54 188 aa11.64□□□□□ -0.55
NECTIN1-207ENST00000532197 LRRC37AA6NMS7 1700 aa11.63□□□□□ -0.55
NECTIN1-207ENST00000532197 PI4KAP2A4QPH2 592 aa11.63□□□□□ -0.55
NECTIN1-207ENST00000532197 NEXNQ0ZGT2 675 aa11.63□□□□□ -0.55
NECTIN1-207ENST00000532197 FLIIQ13045 1269 aa11.63□□□□□ -0.55
NECTIN1-207ENST00000532197 PI4KAP1Q8N8J0 262 aa11.63□□□□□ -0.55
NECTIN1-207ENST00000532197 JMYQ8N9B5 988 aa11.63□□□□□ -0.55
NECTIN1-207ENST00000532197 ZBTB38Q8NAP3 1195 aaPredicted RBP11.63□□□□□ -0.55
NECTIN1-207ENST00000532197 TAOK3Q9H2K8 898 aa11.63□□□□□ -0.55
NECTIN1-207ENST00000532197 CWC25Q9NXE8 425 aaPredicted RBP11.63□□□□□ -0.55
NECTIN1-207ENST00000532197 MAP3K2Q9Y2U5 619 aa11.63□□□□□ -0.55
NECTIN1-207ENST00000532197 SNED1Q8TER0 1413 aa11.62□□□□□ -0.55
NECTIN1-207ENST00000532197 ATP5J2-PTCD1G3V325 749 aa11.62□□□□□ -0.55
NECTIN1-207ENST00000532197 BBOX1O75936 387 aa11.62□□□□□ -0.55
NECTIN1-207ENST00000532197 PCCAP05165 728 aaPredicted RBP11.62□□□□□ -0.55
NECTIN1-207ENST00000532197 HCLS1P14317 486 aaPredicted RBP11.62□□□□□ -0.55
NECTIN1-207ENST00000532197 SLFN5Q08AF3 891 aa11.62□□□□□ -0.55
NECTIN1-207ENST00000532197 SF3B3Q15393 1217 aaKnown RBP11.62□□□□□ -0.55
NECTIN1-207ENST00000532197 TMC4Q7Z404 712 aa11.62□□□□□ -0.55
NECTIN1-207ENST00000532197 MIER1Q8N108 512 aa11.62□□□□□ -0.55
NECTIN1-207ENST00000532197 KLRG1Q96E93 195 aa11.62□□□□□ -0.55
NECTIN1-207ENST00000532197 FAM89AQ96GI7 184 aa11.62□□□□□ -0.55
NECTIN1-207ENST00000532197 MYD88Q99836 296 aa11.62□□□□□ -0.55
NECTIN1-207ENST00000532197 WDR90Q96KV7 1748 aa11.61□□□□□ -0.55
NECTIN1-207ENST00000532197 FKBP4Q02790 459 aaKnown RBP eCLIP11.61□□□□□ -0.55
NECTIN1-207ENST00000532197 C3orf67Q6ZVT6 689 aa11.61□□□□□ -0.55
NECTIN1-207ENST00000532197 DDX46Q7L014 1031 aaKnown RBP11.61□□□□□ -0.55
NECTIN1-207ENST00000532197 G2E3Q7L622 706 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms