RNA–Protein interactions for RNA: ENST00000532001.6

PTP4A2-213, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5

Gene PTP4A2, Length 911 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-213ENST00000532001 PARP3Q9Y6F1 533 aa11.58□□□□□ -0.56
PTP4A2-213ENST00000532001 DLEC1Q9Y238 1755 aa11.58□□□□□ -0.56
PTP4A2-213ENST00000532001 SCN7AQ01118 1682 aa11.58□□□□□ -0.56
PTP4A2-213ENST00000532001 CEMIPQ8WUJ3 1361 aa11.57□□□□□ -0.56
PTP4A2-213ENST00000532001 E2F4Q16254 413 aa11.57□□□□□ -0.56
PTP4A2-213ENST00000532001 WDR70Q9NW82 654 aa11.57□□□□□ -0.56
PTP4A2-213ENST00000532001 PCDHGA10Q9Y5H3 936 aa11.57□□□□□ -0.56
PTP4A2-213ENST00000532001 COL15A1P39059 1388 aa11.56□□□□□ -0.56
PTP4A2-213ENST00000532001 DDR1Q08345 913 aa11.56□□□□□ -0.56
PTP4A2-213ENST00000532001 SLC39A6Q13433 755 aa11.56□□□□□ -0.56
PTP4A2-213ENST00000532001 CFAP53Q96M91 514 aa11.56□□□□□ -0.56
PTP4A2-213ENST00000532001 SRP68Q9UHB9 627 aaKnown RBP11.56□□□□□ -0.56
PTP4A2-213ENST00000532001 GNAT3A8MTJ3 354 aa11.55□□□□□ -0.56
PTP4A2-213ENST00000532001 U2SURPO15042 1029 aaKnown RBP11.55□□□□□ -0.56
PTP4A2-213ENST00000532001 PTPREP23469 700 aa11.55□□□□□ -0.56
PTP4A2-213ENST00000532001 TM4SF1P30408 202 aa11.55□□□□□ -0.56
PTP4A2-213ENST00000532001 ADAM33Q9BZ11 813 aa11.55□□□□□ -0.56
PTP4A2-213ENST00000532001 RSPH6AQ9H0K4 717 aa11.55□□□□□ -0.56
PTP4A2-213ENST00000532001 NARFQ9UHQ1 456 aa11.55□□□□□ -0.56
PTP4A2-213ENST00000532001 ARIH1Q9Y4X5 557 aaPredicted RBP11.55□□□□□ -0.56
PTP4A2-213ENST00000532001 POLRMTO00411 1230 aaKnown RBP11.54□□□□□ -0.56
PTP4A2-213ENST00000532001 ZPR1O75312 459 aa11.54□□□□□ -0.56
PTP4A2-213ENST00000532001 DPEP1P16444 411 aa11.54□□□□□ -0.56
PTP4A2-213ENST00000532001 DDX10Q13206 875 aaKnown RBP11.54□□□□□ -0.56
PTP4A2-213ENST00000532001 PDIA6Q15084 440 aa11.54□□□□□ -0.56
PTP4A2-213ENST00000532001 TTC5Q8N0Z6 440 aa11.54□□□□□ -0.56
PTP4A2-213ENST00000532001 IL17REQ8NFR9 667 aa11.54□□□□□ -0.56
PTP4A2-213ENST00000532001 TSHZ2Q9NRE2 1034 aa11.54□□□□□ -0.56
PTP4A2-213ENST00000532001 ZBTB1Q9Y2K1 713 aa11.54□□□□□ -0.56
PTP4A2-213ENST00000532001 BCORQ6W2J9 1755 aa11.54□□□□□ -0.56
PTP4A2-213ENST00000532001 HEG1Q9ULI3 1381 aa11.54□□□□□ -0.56
PTP4A2-213ENST00000532001 A0A0G2JLW4 131 aa11.53□□□□□ -0.56
PTP4A2-213ENST00000532001 HRO43593 1189 aa11.53□□□□□ -0.56
PTP4A2-213ENST00000532001 KCNA3P22001 575 aa11.53□□□□□ -0.56
PTP4A2-213ENST00000532001 PPP2R1AP30153 589 aa11.53□□□□□ -0.56
PTP4A2-213ENST00000532001 TEFQ10587 303 aa11.53□□□□□ -0.56
PTP4A2-213ENST00000532001 USPL1Q5W0Q7 1092 aa11.53□□□□□ -0.56
PTP4A2-213ENST00000532001 DIEXFQ68CQ4 756 aaKnown RBP11.53□□□□□ -0.56
PTP4A2-213ENST00000532001 ZNF790Q6PG37 636 aa11.53□□□□□ -0.56
PTP4A2-213ENST00000532001 TEX13AQ9BXU3 409 aaPredicted RBP11.53□□□□□ -0.56
PTP4A2-213ENST00000532001 GPBP1L1Q9HC44 474 aaPredicted RBP11.53□□□□□ -0.56
PTP4A2-213ENST00000532001 NUDCQ9Y266 331 aa11.53□□□□□ -0.56
PTP4A2-213ENST00000532001 SBF1O95248 1867 aa11.53□□□□□ -0.56
PTP4A2-213ENST00000532001 SENP3-EIF4A1A0A087X0R7 540 aa11.52□□□□□ -0.57
PTP4A2-213ENST00000532001 STARD3NLO95772 234 aa11.52□□□□□ -0.57
PTP4A2-213ENST00000532001 PRKAR2BP31323 418 aa11.52□□□□□ -0.57
PTP4A2-213ENST00000532001 EIF5P55010 431 aaKnown RBP11.52□□□□□ -0.57
PTP4A2-213ENST00000532001 TYW1BQ6NUM6 668 aa11.52□□□□□ -0.57
PTP4A2-213ENST00000532001 FBXW7Q969H0 707 aa11.52□□□□□ -0.57
PTP4A2-213ENST00000532001 ZNF496Q96IT1 587 aaPredicted RBP11.52□□□□□ -0.57
PTP4A2-213ENST00000532001 SLC4A5Q9BY07 1137 aa11.52□□□□□ -0.57
PTP4A2-213ENST00000532001 WWC3Q9ULE0 1092 aa11.52□□□□□ -0.57
PTP4A2-213ENST00000532001 BCS1LQ9Y276 419 aa11.52□□□□□ -0.57
PTP4A2-213ENST00000532001 ANKRD31Q8N7Z5 1873 aa11.51□□□□□ -0.57
PTP4A2-213ENST00000532001 DLG5Q8TDM6 1919 aa11.51□□□□□ -0.57
PTP4A2-213ENST00000532001 A0A087WZG4 1122 aa11.51□□□□□ -0.57
PTP4A2-213ENST00000532001 FCHSD2O94868 740 aa11.51□□□□□ -0.57
PTP4A2-213ENST00000532001 NFIXQ14938 502 aa11.51□□□□□ -0.57
PTP4A2-213ENST00000532001 PHACTR3Q96KR7 559 aa11.51□□□□□ -0.57
PTP4A2-213ENST00000532001 PIM2Q9P1W9 311 aa11.51□□□□□ -0.57
PTP4A2-213ENST00000532001 CEP350Q5VT06 3117 aa11.51□□□□□ -0.57
PTP4A2-213ENST00000532001 LAMB4A4D0S4 1761 aa11.51□□□□□ -0.57
PTP4A2-213ENST00000532001 SPDYE16A6NNV3 312 aaPredicted RBP11.5□□□□□ -0.57
PTP4A2-213ENST00000532001 DALRD3Q5D0E6 543 aaKnown RBP11.5□□□□□ -0.57
PTP4A2-213ENST00000532001 FMNL2Q96PY5 1086 aa11.5□□□□□ -0.57
PTP4A2-213ENST00000532001 VPS9D1Q9Y2B5 631 aa11.5□□□□□ -0.57
PTP4A2-213ENST00000532001 KDM3BQ7LBC6 1761 aa11.49□□□□□ -0.57
PTP4A2-213ENST00000532001 HTATSF1O43719 755 aaKnown RBP11.49□□□□□ -0.57
PTP4A2-213ENST00000532001 IL6STP40189 918 aaPredicted RBP11.49□□□□□ -0.57
PTP4A2-213ENST00000532001 CNGB1Q14028 1251 aaPredicted RBP11.49□□□□□ -0.57
PTP4A2-213ENST00000532001 EPAS1Q99814 870 aa11.49□□□□□ -0.57
PTP4A2-213ENST00000532001 COL11A2P13942 1736 aaPredicted RBP11.49□□□□□ -0.57
PTP4A2-213ENST00000532001 U2AF1L5P0DN76 240 aaPredicted RBP11.48□□□□□ -0.57
PTP4A2-213ENST00000532001 CANXP27824 592 aaKnown RBP11.48□□□□□ -0.57
PTP4A2-213ENST00000532001 U2AF1Q01081 240 aaKnown RBP eCLIP11.48□□□□□ -0.571e-7■□□□□ 9.5
PTP4A2-213ENST00000532001 ARHGAP27Q6ZUM4 889 aa11.48□□□□□ -0.57
PTP4A2-213ENST00000532001 ZBED2Q9BTP6 218 aa11.48□□□□□ -0.57
PTP4A2-213ENST00000532001 TNRC6CQ9HCJ0 1690 aaKnown RBP11.48□□□□□ -0.57
PTP4A2-213ENST00000532001 ARFGEF2Q9Y6D5 1785 aa11.48□□□□□ -0.57
PTP4A2-213ENST00000532001 CARMIL3Q8ND23 1372 aa11.47□□□□□ -0.57
PTP4A2-213ENST00000532001 BTBD11A6QL63 1104 aa11.47□□□□□ -0.57
PTP4A2-213ENST00000532001 SERPINB2P05120 415 aa11.47□□□□□ -0.57
PTP4A2-213ENST00000532001 CHRNA5P30532 468 aa11.47□□□□□ -0.57
PTP4A2-213ENST00000532001 PDZRN3Q9UPQ7 1066 aa11.47□□□□□ -0.57
PTP4A2-213ENST00000532001 ZC3H4Q9UPT8 1303 aaKnown RBP11.46□□□□□ -0.57
PTP4A2-213ENST00000532001 PPP1R3GB7ZBB8 358 aa11.46□□□□□ -0.57
PTP4A2-213ENST00000532001 ZNF526Q8TF50 670 aaPredicted RBP11.46□□□□□ -0.57
PTP4A2-213ENST00000532001 RTF1Q92541 710 aaKnown RBP11.46□□□□□ -0.57
PTP4A2-213ENST00000532001 DDX12PQ92771 950 aa11.46□□□□□ -0.57
PTP4A2-213ENST00000532001 TIAM2Q8IVF5 1701 aa11.46□□□□□ -0.58
PTP4A2-213ENST00000532001 DICER1Q9UPY3 1922 aaKnown RBP11.45□□□□□ -0.58
PTP4A2-213ENST00000532001 FER1L6Q2WGJ9 1857 aa11.45□□□□□ -0.58
PTP4A2-213ENST00000532001 CCDC88AQ3V6T2 1871 aa11.45□□□□□ -0.58
PTP4A2-213ENST00000532001 KCNQ3O43525 872 aa11.45□□□□□ -0.58
PTP4A2-213ENST00000532001 PLCB2Q00722 1185 aa11.45□□□□□ -0.58
PTP4A2-213ENST00000532001 C9orf131Q5VYM1 1079 aa11.45□□□□□ -0.58
PTP4A2-213ENST00000532001 CAMTA2O94983 1202 aa11.44□□□□□ -0.58
PTP4A2-213ENST00000532001 A1BGP04217 495 aa11.44□□□□□ -0.58
PTP4A2-213ENST00000532001 SNRPA1P09661 255 aaKnown RBP11.44□□□□□ -0.58
PTP4A2-213ENST00000532001 HSPA6P17066 643 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms