RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 NLRP10Q86W26 655 aa13.92□□□□□ -0.18
GPATCH4-216ENST00000531900 TRMT2AQ8IZ69 625 aaKnown RBP13.92□□□□□ -0.18
GPATCH4-216ENST00000531900 ZNF622Q969S3 477 aaKnown RBP eCLIP13.92□□□□□ -0.18
GPATCH4-216ENST00000531900 PHAXQ9H814 394 aaKnown RBP13.92□□□□□ -0.18
GPATCH4-216ENST00000531900 KDM2BQ8NHM5 1336 aa13.91□□□□□ -0.18
GPATCH4-216ENST00000531900 E9PSI1 815 aa13.91□□□□□ -0.18
GPATCH4-216ENST00000531900 GPTP24298 496 aa13.91□□□□□ -0.18
GPATCH4-216ENST00000531900 MASTLQ96GX5 879 aa13.91□□□□□ -0.18
GPATCH4-216ENST00000531900 STK31Q9BXU1 1019 aa13.91□□□□□ -0.18
GPATCH4-216ENST00000531900 TOMM70O94826 608 aa13.9□□□□□ -0.18
GPATCH4-216ENST00000531900 HSPA6P17066 643 aa13.9□□□□□ -0.18
GPATCH4-216ENST00000531900 LMNB1P20700 586 aa13.9□□□□□ -0.18
GPATCH4-216ENST00000531900 HOXA10P31260 410 aaPredicted RBP13.9□□□□□ -0.18
GPATCH4-216ENST00000531900 SLFN5Q08AF3 891 aa13.9□□□□□ -0.18
GPATCH4-216ENST00000531900 C16orf71Q8IYS4 520 aaPredicted RBP13.9□□□□□ -0.18
GPATCH4-216ENST00000531900 CCDC24Q8N4L8 307 aa13.9□□□□□ -0.18
GPATCH4-216ENST00000531900 CNKSR1Q969H4 720 aa13.9□□□□□ -0.18
GPATCH4-216ENST00000531900 UTP14AQ9BVJ6 771 aaKnown RBP13.9□□□□□ -0.18
GPATCH4-216ENST00000531900 ZC3H4Q9UPT8 1303 aaKnown RBP13.9□□□□□ -0.19
GPATCH4-216ENST00000531900 SBF1O95248 1867 aa13.89□□□□□ -0.19
GPATCH4-216ENST00000531900 ABCC12Q96J65 1359 aa13.89□□□□□ -0.19
GPATCH4-216ENST00000531900 DDX58O95786 925 aaKnown RBP13.89□□□□□ -0.19
GPATCH4-216ENST00000531900 SLC4A2P04920 1241 aa13.89□□□□□ -0.19
GPATCH4-216ENST00000531900 NPR1P16066 1061 aa13.89□□□□□ -0.19
GPATCH4-216ENST00000531900 GTF2E1P29083 439 aaPredicted RBP13.89□□□□□ -0.19
GPATCH4-216ENST00000531900 ERFEQ4G0M1 354 aa13.89□□□□□ -0.19
GPATCH4-216ENST00000531900 KSR2Q6VAB6 950 aa13.89□□□□□ -0.19
GPATCH4-216ENST00000531900 SLX4Q8IY92 1834 aa13.89□□□□□ -0.19
GPATCH4-216ENST00000531900 RASSF7Q02833 373 aa13.88□□□□□ -0.19
GPATCH4-216ENST00000531900 RIC3Q7Z5B4 369 aa13.88□□□□□ -0.19
GPATCH4-216ENST00000531900 NUTM1Q86Y26 1132 aa13.88□□□□□ -0.19
GPATCH4-216ENST00000531900 ZNF428Q96B54 188 aa13.88□□□□□ -0.19
GPATCH4-216ENST00000531900 METTL22Q9BUU2 404 aaPredicted RBP13.88□□□□□ -0.19
GPATCH4-216ENST00000531900 NMRK2Q9NPI5 230 aa13.88□□□□□ -0.19
GPATCH4-216ENST00000531900 TNRC6CQ9HCJ0 1690 aaKnown RBP13.88□□□□□ -0.19
GPATCH4-216ENST00000531900 FER1L6Q2WGJ9 1857 aa13.87□□□□□ -0.19
GPATCH4-216ENST00000531900 FAM177BA6PVY3 158 aa13.87□□□□□ -0.19
GPATCH4-216ENST00000531900 ALDH1B1P30837 517 aa13.87□□□□□ -0.19
GPATCH4-216ENST00000531900 CCDC191Q8NCU4 936 aa13.87□□□□□ -0.19
GPATCH4-216ENST00000531900 C7orf43Q8WVR3 580 aa13.87□□□□□ -0.19
GPATCH4-216ENST00000531900 SH3TC1Q8TE82 1336 aa13.87□□□□□ -0.19
GPATCH4-216ENST00000531900 PI4KAP2A4QPH2 592 aa13.86□□□□□ -0.19
GPATCH4-216ENST00000531900 C21orf2O43822 256 aa13.86□□□□□ -0.19
GPATCH4-216ENST00000531900 FLIIQ13045 1269 aa13.86□□□□□ -0.19
GPATCH4-216ENST00000531900 SOGA3Q5TF21 947 aa13.86□□□□□ -0.19
GPATCH4-216ENST00000531900 G2E3Q7L622 706 aa13.86□□□□□ -0.19
GPATCH4-216ENST00000531900 PI4KAP1Q8N8J0 262 aa13.86□□□□□ -0.19
GPATCH4-216ENST00000531900 NLRP3Q96P20 1036 aa13.86□□□□□ -0.19
GPATCH4-216ENST00000531900 ZNF219Q9P2Y4 722 aaPredicted RBP13.86□□□□□ -0.19
GPATCH4-216ENST00000531900 TRMT112Q9UI30 125 aaKnown RBP13.86□□□□□ -0.19
GPATCH4-216ENST00000531900 NFKBIEO00221 500 aa13.85□□□□□ -0.19
GPATCH4-216ENST00000531900 CT47B1P0C2W7 299 aaPredicted RBP13.85□□□□□ -0.19
GPATCH4-216ENST00000531900 PRPF40BQ6NWY9 871 aaKnown RBP13.85□□□□□ -0.19
GPATCH4-216ENST00000531900 RBM46Q8TBY0 533 aaKnown RBP13.85□□□□□ -0.19
GPATCH4-216ENST00000531900 CRAMP1Q96RY5 1269 aa13.85□□□□□ -0.19
GPATCH4-216ENST00000531900 RRAGCQ9HB90 399 aa13.85□□□□□ -0.19
GPATCH4-216ENST00000531900 MAP3K2Q9Y2U5 619 aa13.85□□□□□ -0.19
GPATCH4-216ENST00000531900 LAMB2P55268 1798 aa13.85□□□□□ -0.19
GPATCH4-216ENST00000531900 DDX60Q8IY21 1712 aaKnown RBP13.84□□□□□ -0.19
GPATCH4-216ENST00000531900 ATP5J2-PTCD1G3V325 749 aa13.84□□□□□ -0.19
GPATCH4-216ENST00000531900 DPY19L2Q6NUT2 758 aa13.84□□□□□ -0.19
GPATCH4-216ENST00000531900 ZBTB38Q8NAP3 1195 aaPredicted RBP13.84□□□□□ -0.19
GPATCH4-216ENST00000531900 CDCA7LQ96GN5 454 aa13.84□□□□□ -0.19
GPATCH4-216ENST00000531900 CACNA1SQ13698 1873 aa13.84□□□□□ -0.19
GPATCH4-216ENST00000531900 LTBP3Q9NS15 1303 aa13.84□□□□□ -0.19
GPATCH4-216ENST00000531900 CCDC88AQ3V6T2 1871 aa13.83□□□□□ -0.2
GPATCH4-216ENST00000531900 GLTPD2A6NH11 291 aa13.83□□□□□ -0.2
GPATCH4-216ENST00000531900 TCERG1O14776 1098 aaKnown RBP13.83□□□□□ -0.2
GPATCH4-216ENST00000531900 IGKV5-2P06315 115 aa13.83□□□□□ -0.2
GPATCH4-216ENST00000531900 HSP90B1P14625 803 aaKnown RBP13.83□□□□□ -0.2
GPATCH4-216ENST00000531900 APLP1P51693 650 aa13.83□□□□□ -0.2
GPATCH4-216ENST00000531900 SF3B3Q15393 1217 aaKnown RBP13.83□□□□□ -0.2
GPATCH4-216ENST00000531900 C3orf67Q6ZVT6 689 aa13.83□□□□□ -0.2
GPATCH4-216ENST00000531900 SYNE4Q8N205 404 aa13.83□□□□□ -0.2
GPATCH4-216ENST00000531900 MYD88Q99836 296 aa13.83□□□□□ -0.2
GPATCH4-216ENST00000531900 DICER1Q9UPY3 1922 aaKnown RBP13.83□□□□□ -0.2
GPATCH4-216ENST00000531900 SNED1Q8TER0 1413 aa13.82□□□□□ -0.2
GPATCH4-216ENST00000531900 PCCAP05165 728 aaPredicted RBP13.82□□□□□ -0.2
GPATCH4-216ENST00000531900 FSTL1Q12841 308 aa13.82□□□□□ -0.2
GPATCH4-216ENST00000531900 GRIPAP1Q4V328 841 aa13.82□□□□□ -0.2
GPATCH4-216ENST00000531900 CC2D2BQ6DHV5 1058 aa13.82□□□□□ -0.2
GPATCH4-216ENST00000531900 FAM89AQ96GI7 184 aa13.82□□□□□ -0.2
GPATCH4-216ENST00000531900 RBM17Q96I25 401 aaKnown RBP13.82□□□□□ -0.2
GPATCH4-216ENST00000531900 TAOK3Q9H2K8 898 aa13.82□□□□□ -0.2
GPATCH4-216ENST00000531900 CWC25Q9NXE8 425 aaPredicted RBP13.82□□□□□ -0.2
GPATCH4-216ENST00000531900 CEP350Q5VT06 3117 aa13.82□□□□□ -0.2
GPATCH4-216ENST00000531900 VEGFAP15692 232 aaPredicted RBP13.81□□□□□ -0.2
GPATCH4-216ENST00000531900 PRELPP51888 382 aa13.81□□□□□ -0.2
GPATCH4-216ENST00000531900 BRPF1P55201 1214 aaPredicted RBP13.81□□□□□ -0.2
GPATCH4-216ENST00000531900 NEXNQ0ZGT2 675 aa13.81□□□□□ -0.2
GPATCH4-216ENST00000531900 FKBP5Q13451 457 aaPredicted RBP13.81□□□□□ -0.2
GPATCH4-216ENST00000531900 ALDH1L2Q3SY69 923 aa13.81□□□□□ -0.2
GPATCH4-216ENST00000531900 DNAAF4Q8WXU2 420 aa13.81□□□□□ -0.2
GPATCH4-216ENST00000531900 RPGRQ92834 1020 aaKnown RBP13.81□□□□□ -0.2
GPATCH4-216ENST00000531900 CDHR2Q9BYE9 1310 aa13.81□□□□□ -0.2
GPATCH4-216ENST00000531900 NEURL1BA8MQ27 555 aa13.8□□□□□ -0.2
GPATCH4-216ENST00000531900 IRS4O14654 1257 aaPredicted RBP13.8□□□□□ -0.2
GPATCH4-216ENST00000531900 BBOX1O75936 387 aa13.8□□□□□ -0.2
GPATCH4-216ENST00000531900 HCLS1P14317 486 aaPredicted RBP13.8□□□□□ -0.2
GPATCH4-216ENST00000531900 CCDC93Q567U6 631 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms