RNA–Protein interactions for RNA: ENST00000531504.5

HIPK3-205, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 2

Gene HIPK3, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-205ENST00000531504 USP50Q70EL3 339 aaPredicted RBP26.5■■□□□ 1.83
HIPK3-205ENST00000531504 LAMB4A4D0S4 1761 aa26.5■■□□□ 1.83
HIPK3-205ENST00000531504 NPC1L1Q9UHC9 1359 aa26.49■■□□□ 1.83
HIPK3-205ENST00000531504 NBPF26B4DH59 902 aa26.49■■□□□ 1.83
HIPK3-205ENST00000531504 SCNN1DP51172 638 aa26.49■■□□□ 1.83
HIPK3-205ENST00000531504 NBPF10Q6P3W6 841 aaKnown RBP26.49■■□□□ 1.83
HIPK3-205ENST00000531504 LARGE2Q8N3Y3 721 aa26.49■■□□□ 1.83
HIPK3-205ENST00000531504 NBPF15Q8N660 670 aa26.49■■□□□ 1.83
HIPK3-205ENST00000531504 PHACTR3Q96KR7 559 aa26.49■■□□□ 1.83
HIPK3-205ENST00000531504 COL4A5P29400 1685 aa26.49■■□□□ 1.83
HIPK3-205ENST00000531504 MAP2K2P36507 400 aa26.48■■□□□ 1.83
HIPK3-205ENST00000531504 RPGRQ92834 1020 aaKnown RBP26.48■■□□□ 1.83
HIPK3-205ENST00000531504 TLL2Q9Y6L7 1015 aa26.48■■□□□ 1.83
HIPK3-205ENST00000531504 EPS15P42566 896 aa26.47■■□□□ 1.83
HIPK3-205ENST00000531504 ABCC12Q96J65 1359 aa26.46■■□□□ 1.83
HIPK3-205ENST00000531504 CA12O43570 354 aa26.46■■□□□ 1.83
HIPK3-205ENST00000531504 HLFQ16534 295 aa26.46■■□□□ 1.83
HIPK3-205ENST00000531504 CFAP53Q96M91 514 aa26.46■■□□□ 1.83
HIPK3-205ENST00000531504 RSPH6AQ9H0K4 717 aa26.46■■□□□ 1.83
HIPK3-205ENST00000531504 RIC1Q4ADV7 1423 aa26.46■■□□□ 1.83
HIPK3-205ENST00000531504 NUP98P52948 1817 aa26.45■■□□□ 1.82
HIPK3-205ENST00000531504 FMR1Q06787 632 aaKnown RBP eCLIP26.45■■□□□ 1.82
HIPK3-205ENST00000531504 CST9Q5W186 159 aa26.45■■□□□ 1.82
HIPK3-205ENST00000531504 NIM1KQ8IY84 436 aa26.45■■□□□ 1.82
HIPK3-205ENST00000531504 PCDH10Q9P2E7 1040 aa26.45■■□□□ 1.82
HIPK3-205ENST00000531504 MCM10Q7L590 875 aa26.44■■□□□ 1.82
HIPK3-205ENST00000531504 TRAF5O00463 557 aa26.43■■□□□ 1.82
HIPK3-205ENST00000531504 HOXA10P31260 410 aaPredicted RBP26.43■■□□□ 1.82
HIPK3-205ENST00000531504 NUTM1Q86Y26 1132 aa26.43■■□□□ 1.82
HIPK3-205ENST00000531504 IBTKQ9P2D0 1353 aaPredicted RBP26.43■■□□□ 1.82
HIPK3-205ENST00000531504 ERVV-1B6SEH8 477 aa26.42■■□□□ 1.82
HIPK3-205ENST00000531504 ADARB2Q9NS39 739 aaKnown RBP26.42■■□□□ 1.82
HIPK3-205ENST00000531504 TSKSQ9UJT2 592 aa26.42■■□□□ 1.82
HIPK3-205ENST00000531504 NUDCQ9Y266 331 aa26.42■■□□□ 1.82
HIPK3-205ENST00000531504 CNGB1Q14028 1251 aaPredicted RBP26.41■■□□□ 1.82
HIPK3-205ENST00000531504 RBM17Q96I25 401 aaKnown RBP26.41■■□□□ 1.82
HIPK3-205ENST00000531504 CFAP44Q96MT7 982 aa26.41■■□□□ 1.82
HIPK3-205ENST00000531504 TMX4Q9H1E5 349 aaPredicted RBP26.41■■□□□ 1.82
HIPK3-205ENST00000531504 PPEF1O14829 653 aaPredicted RBP26.4■■□□□ 1.82
HIPK3-205ENST00000531504 AOC2O75106 756 aa26.4■■□□□ 1.82
HIPK3-205ENST00000531504 KIF6Q6ZMV9 814 aa26.4■■□□□ 1.82
HIPK3-205ENST00000531504 CRAMP1Q96RY5 1269 aa26.4■■□□□ 1.82
HIPK3-205ENST00000531504 PPIP5K2O43314 1243 aa26.39■■□□□ 1.82
HIPK3-205ENST00000531504 HTATSF1O43719 755 aaKnown RBP26.39■■□□□ 1.82
HIPK3-205ENST00000531504 SAPCD2Q86UD0 394 aa26.39■■□□□ 1.82
HIPK3-205ENST00000531504 HHIPL1Q96JK4 782 aa26.39■■□□□ 1.82
HIPK3-205ENST00000531504 GPRC5DQ9NZD1 345 aa26.39■■□□□ 1.82
HIPK3-205ENST00000531504 MAP3K15Q6ZN16 1313 aa26.39■■□□□ 1.81
HIPK3-205ENST00000531504 BRPF1P55201 1214 aaPredicted RBP26.38■■□□□ 1.81
HIPK3-205ENST00000531504 MCOLN1Q9GZU1 580 aa26.38■■□□□ 1.81
HIPK3-205ENST00000531504 VPS33BQ9H267 617 aa26.38■■□□□ 1.81
HIPK3-205ENST00000531504 CELF2O95319 508 aaKnown RBP26.37■■□□□ 1.81
HIPK3-205ENST00000531504 NGEFQ8N5V2 710 aa26.37■■□□□ 1.81
HIPK3-205ENST00000531504 CASP8AP2Q9UKL3 1982 aa26.37■■□□□ 1.81
HIPK3-205ENST00000531504 TAF7Q15545 349 aaPredicted RBP26.36■■□□□ 1.81
HIPK3-205ENST00000531504 U2AF1L5P0DN76 240 aaPredicted RBP26.35■■□□□ 1.81
HIPK3-205ENST00000531504 U2AF1Q01081 240 aaKnown RBP eCLIP26.35■■□□□ 1.818e-15■■■■■ 28.3
HIPK3-205ENST00000531504 DCTN1Q14203 1278 aa26.35■■□□□ 1.81
HIPK3-205ENST00000531504 CDHR2Q9BYE9 1310 aa26.35■■□□□ 1.81
HIPK3-205ENST00000531504 TCERG1O14776 1098 aaKnown RBP26.34■■□□□ 1.81
HIPK3-205ENST00000531504 GPTP24298 496 aa26.34■■□□□ 1.81
HIPK3-205ENST00000531504 AOC3Q16853 763 aa26.34■■□□□ 1.81
HIPK3-205ENST00000531504 SUPT20HQ8NEM7 779 aa26.34■■□□□ 1.81
HIPK3-205ENST00000531504 ZNRF3Q9ULT6 936 aa26.33■■□□□ 1.81
HIPK3-205ENST00000531504 UBN2Q6ZU65 1347 aa26.33■■□□□ 1.81
HIPK3-205ENST00000531504 KDM3BQ7LBC6 1761 aa26.33■■□□□ 1.8
HIPK3-205ENST00000531504 CXCL9Q07325 125 aa26.31■■□□□ 1.8
HIPK3-205ENST00000531504 DGKZQ13574 1117 aa26.31■■□□□ 1.8
HIPK3-205ENST00000531504 SUSD4Q5VX71 490 aa26.31■■□□□ 1.8
HIPK3-205ENST00000531504 PNISRQ8TF01 805 aaKnown RBP26.31■■□□□ 1.8
HIPK3-205ENST00000531504 ZC3H15Q8WU90 426 aaKnown RBP26.31■■□□□ 1.8
HIPK3-205ENST00000531504 GLIS2Q9BZE0 524 aaPredicted RBP26.31■■□□□ 1.8
HIPK3-205ENST00000531504 RRP7AQ9Y3A4 280 aaKnown RBP26.31■■□□□ 1.8
HIPK3-205ENST00000531504 ATP6V0A2Q9Y487 856 aa26.31■■□□□ 1.8
HIPK3-205ENST00000531504 GMPSP49915 693 aaPredicted RBP26.3■■□□□ 1.8
HIPK3-205ENST00000531504 TTLL7Q6ZT98 887 aa26.3■■□□□ 1.8
HIPK3-205ENST00000531504 PPP1R42Q7Z4L9 355 aa26.3■■□□□ 1.8
HIPK3-205ENST00000531504 NLRP3Q96P20 1036 aa26.3■■□□□ 1.8
HIPK3-205ENST00000531504 ZBTB3Q9H5J0 574 aa26.3■■□□□ 1.8
HIPK3-205ENST00000531504 ZNF408Q9H9D4 720 aa26.3■■□□□ 1.8
HIPK3-205ENST00000531504 PGAP2Q9UHJ9 254 aa26.3■■□□□ 1.8
HIPK3-205ENST00000531504 NTSR2O95665 410 aa26.29■■□□□ 1.8
HIPK3-205ENST00000531504 NOGQ13253 232 aa26.29■■□□□ 1.8
HIPK3-205ENST00000531504 CIAPIN1Q6FI81 312 aa26.29■■□□□ 1.8
HIPK3-205ENST00000531504 MIS18AQ9NYP9 233 aa26.29■■□□□ 1.8
HIPK3-205ENST00000531504 CDC37L1Q7L3B6 337 aa26.28■■□□□ 1.8
HIPK3-205ENST00000531504 ZNF34Q8IZ26 560 aa26.28■■□□□ 1.8
HIPK3-205ENST00000531504 BCL2L13Q9BXK5 485 aa26.28■■□□□ 1.8
HIPK3-205ENST00000531504 MYL6BP14649 208 aa26.27■■□□□ 1.8
HIPK3-205ENST00000531504 PARP10Q53GL7 1025 aa26.27■■□□□ 1.8
HIPK3-205ENST00000531504 SLC51AQ86UW1 340 aa26.27■■□□□ 1.8
HIPK3-205ENST00000531504 RTFDC1Q9BY42 306 aaPredicted RBP26.27■■□□□ 1.8
HIPK3-205ENST00000531504 TNIP1Q15025 636 aa26.26■■□□□ 1.79
HIPK3-205ENST00000531504 GIGYF2Q6Y7W6 1299 aaKnown RBP26.26■■□□□ 1.79
HIPK3-205ENST00000531504 PDE4DIPQ5VU43 2346 aa26.26■■□□□ 1.79
HIPK3-205ENST00000531504 NEFMP07197 916 aa26.25■■□□□ 1.79
HIPK3-205ENST00000531504 ZEB1P37275 1124 aaPredicted RBP26.25■■□□□ 1.79
HIPK3-205ENST00000531504 DPP8Q6V1X1 898 aaPredicted RBP26.25■■□□□ 1.79
HIPK3-205ENST00000531504 C3orf67Q6ZVT6 689 aa26.25■■□□□ 1.79
HIPK3-205ENST00000531504 DLG5Q8TDM6 1919 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms