RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 PUS7Q96PZ0 661 aaKnown RBP16.58■□□□□ 0.24
PCF11-204ENST00000530660 EFCAB6Q5THR3 1501 aa16.58■□□□□ 0.24
PCF11-204ENST00000530660 CFAP65Q6ZU64 1925 aaKnown RBP16.58■□□□□ 0.24
PCF11-204ENST00000530660 GOLGA6L4A6NEF3 574 aa16.58■□□□□ 0.24
PCF11-204ENST00000530660 LEKR1Q6ZMV7 388 aa16.58■□□□□ 0.24
PCF11-204ENST00000530660 C11orf57Q6ZUT1 292 aaPredicted RBP16.58■□□□□ 0.24
PCF11-204ENST00000530660 CARD6Q9BX69 1037 aa16.58■□□□□ 0.24
PCF11-204ENST00000530660 DNAI1Q9UI46 699 aa16.58■□□□□ 0.24
PCF11-204ENST00000530660 LIMCH1Q9UPQ0 1083 aa16.57■□□□□ 0.24
PCF11-204ENST00000530660 ERCC6L2Q5T890 1561 aa16.57■□□□□ 0.24
PCF11-204ENST00000530660 GNAI3P08754 354 aa16.57■□□□□ 0.24
PCF11-204ENST00000530660 HOMER1Q86YM7 354 aa16.57■□□□□ 0.24
PCF11-204ENST00000530660 MRFAP1L1Q96HT8 127 aa16.57■□□□□ 0.24
PCF11-204ENST00000530660 SUFUQ9UMX1 484 aa16.57■□□□□ 0.24
PCF11-204ENST00000530660 FAM135BQ49AJ0 1406 aa16.57■□□□□ 0.24
PCF11-204ENST00000530660 IQCB1Q15051 598 aa16.57■□□□□ 0.24
PCF11-204ENST00000530660 IQUBQ8NA54 791 aa16.57■□□□□ 0.24
PCF11-204ENST00000530660 DONSONQ9NYP3 566 aa16.57■□□□□ 0.24
PCF11-204ENST00000530660 KRT85P78386 507 aa16.56■□□□□ 0.24
PCF11-204ENST00000530660 CCDC91Q7Z6B0 441 aa16.56■□□□□ 0.24
PCF11-204ENST00000530660 OSBPL3Q9H4L5 887 aa16.56■□□□□ 0.24
PCF11-204ENST00000530660 PLEKHA4Q9H4M7 779 aa16.56■□□□□ 0.24
PCF11-204ENST00000530660 PNPLA6Q8IY17 1366 aa16.56■□□□□ 0.24
PCF11-204ENST00000530660 IFIT2P09913 472 aaKnown RBP16.56■□□□□ 0.24
PCF11-204ENST00000530660 HSPA4P34932 840 aa16.56■□□□□ 0.24
PCF11-204ENST00000530660 RASEFQ8IZ41 740 aa16.56■□□□□ 0.24
PCF11-204ENST00000530660 TTC14Q96N46 770 aa16.56■□□□□ 0.24
PCF11-204ENST00000530660 GLI2P10070 1586 aa16.55■□□□□ 0.24
PCF11-204ENST00000530660 FAM83GA6ND36 823 aa16.55■□□□□ 0.24
PCF11-204ENST00000530660 TADA3O75528 432 aa16.55■□□□□ 0.24
PCF11-204ENST00000530660 CLSTN2Q9H4D0 955 aa16.55■□□□□ 0.24
PCF11-204ENST00000530660 URI1O94763 535 aaPredicted RBP16.55■□□□□ 0.24
PCF11-204ENST00000530660 ZNF853P0CG23 659 aa16.55■□□□□ 0.24
PCF11-204ENST00000530660 EVCP57679 992 aa16.55■□□□□ 0.24
PCF11-204ENST00000530660 FANCGO15287 622 aa16.55■□□□□ 0.24
PCF11-204ENST00000530660 TRHP20396 242 aaPredicted RBP16.55■□□□□ 0.24
PCF11-204ENST00000530660 PPM1EQ8WY54 764 aa16.55■□□□□ 0.24
PCF11-204ENST00000530660 VPS18Q9P253 973 aa16.55■□□□□ 0.24
PCF11-204ENST00000530660 DCTN1Q14203 1278 aa16.54■□□□□ 0.24
PCF11-204ENST00000530660 CDC37L1Q7L3B6 337 aa16.54■□□□□ 0.24
PCF11-204ENST00000530660 PSD3Q9NYI0 1048 aa16.54■□□□□ 0.24
PCF11-204ENST00000530660 SNX14Q9Y5W7 946 aa16.54■□□□□ 0.24
PCF11-204ENST00000530660 PPLO60437 1756 aa16.54■□□□□ 0.24
PCF11-204ENST00000530660 GSCP56915 257 aaPredicted RBP16.54■□□□□ 0.24
PCF11-204ENST00000530660 GNL2Q13823 731 aaKnown RBP16.54■□□□□ 0.24
PCF11-204ENST00000530660 MCTP2Q6DN12 878 aa16.54■□□□□ 0.24
PCF11-204ENST00000530660 SARM1Q6SZW1 724 aa16.54■□□□□ 0.24
PCF11-204ENST00000530660 CWC27Q6UX04 472 aaKnown RBP16.54■□□□□ 0.24
PCF11-204ENST00000530660 RBM43Q6ZSC3 357 aaKnown RBP16.54■□□□□ 0.24
PCF11-204ENST00000530660 FBXW7Q969H0 707 aa16.54■□□□□ 0.24
PCF11-204ENST00000530660 FUT8Q9BYC5 575 aa16.54■□□□□ 0.24
PCF11-204ENST00000530660 TERF2IPQ9NYB0 399 aa16.54■□□□□ 0.24
PCF11-204ENST00000530660 MINK1Q8N4C8 1332 aaPredicted RBP16.54■□□□□ 0.24
PCF11-204ENST00000530660 IVLP07476 585 aa16.53■□□□□ 0.24
PCF11-204ENST00000530660 NECAB1Q8N987 351 aa16.53■□□□□ 0.24
PCF11-204ENST00000530660 STAG3Q9UJ98 1225 aa16.53■□□□□ 0.24
PCF11-204ENST00000530660 ATP8B1O43520 1251 aa16.53■□□□□ 0.24
PCF11-204ENST00000530660 DDX54Q8TDD1 881 aaKnown RBP16.53■□□□□ 0.24
PCF11-204ENST00000530660 FANCAO15360 1455 aa16.53■□□□□ 0.24
PCF11-204ENST00000530660 SKIDA1Q1XH10 827 aa16.53■□□□□ 0.24
PCF11-204ENST00000530660 TTLL5Q6EMB2 1281 aa16.53■□□□□ 0.24
PCF11-204ENST00000530660 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.53■□□□□ 0.24
PCF11-204ENST00000530660 BICD2Q8TD16 824 aa16.53■□□□□ 0.24
PCF11-204ENST00000530660 ARFGAP3Q9NP61 516 aa16.53■□□□□ 0.24
PCF11-204ENST00000530660 DDX19AQ9NUU7 478 aaKnown RBP16.53■□□□□ 0.24
PCF11-204ENST00000530660 MSH6P52701 1360 aa16.53■□□□□ 0.24
PCF11-204ENST00000530660 BECN2A8MW95 431 aa16.52■□□□□ 0.24
PCF11-204ENST00000530660 MAP4K4O95819 1239 aaPredicted RBP16.52■□□□□ 0.24
PCF11-204ENST00000530660 CORO7P57737 925 aa16.52■□□□□ 0.24
PCF11-204ENST00000530660 ARHGEF28Q8N1W1 1705 aaKnown RBP16.52■□□□□ 0.24
PCF11-204ENST00000530660 MAP2K2P36507 400 aa16.52■□□□□ 0.24
PCF11-204ENST00000530660 CCDC158Q5M9N0 1113 aa16.52■□□□□ 0.24
PCF11-204ENST00000530660 SPATA32Q96LK8 384 aa16.52■□□□□ 0.24
PCF11-204ENST00000530660 ZSCAN16Q9H4T2 348 aaPredicted RBP16.52■□□□□ 0.24
PCF11-204ENST00000530660 KCND1Q9NSA2 647 aa16.52■□□□□ 0.24
PCF11-204ENST00000530660 NBPF6Q5VWK0 638 aa16.52■□□□□ 0.23
PCF11-204ENST00000530660 NBPF4Q96M43 638 aa16.52■□□□□ 0.23
PCF11-204ENST00000530660 PRAM1Q96QH2 718 aa16.52■□□□□ 0.23
PCF11-204ENST00000530660 TTC21BQ7Z4L5 1316 aa16.51■□□□□ 0.23
PCF11-204ENST00000530660 ETF1P62495 437 aaKnown RBP16.51■□□□□ 0.23
PCF11-204ENST00000530660 LARP1BQ659C4 914 aaKnown RBP16.51■□□□□ 0.23
PCF11-204ENST00000530660 SUGP1Q8IWZ8 645 aaKnown RBP16.51■□□□□ 0.23
PCF11-204ENST00000530660 ZCCHC11Q5TAX3 1644 aaKnown RBP16.51■□□□□ 0.23
PCF11-204ENST00000530660 MMS22LQ6ZRQ5 1243 aa16.51■□□□□ 0.23
PCF11-204ENST00000530660 NBPF11Q86T75 865 aa16.51■□□□□ 0.23
PCF11-204ENST00000530660 IL17RAQ96F46 866 aa16.51■□□□□ 0.23
PCF11-204ENST00000530660 CAMSAP1Q5T5Y3 1602 aa16.51■□□□□ 0.23
PCF11-204ENST00000530660 EFCAB8A8MWE9 144 aa16.5■□□□□ 0.23
PCF11-204ENST00000530660 TDO2P48775 406 aa16.5■□□□□ 0.23
PCF11-204ENST00000530660 ST3GAL1Q11201 340 aa16.5■□□□□ 0.23
PCF11-204ENST00000530660 SWT1Q5T5J6 900 aaKnown RBP16.5■□□□□ 0.23
PCF11-204ENST00000530660 FAM177A1Q8N128 213 aaPredicted RBP16.5■□□□□ 0.23
PCF11-204ENST00000530660 ANKRD20A12PQ8NF67 263 aa16.5■□□□□ 0.23
PCF11-204ENST00000530660 ARMCX5Q6P1M9 558 aa16.5■□□□□ 0.23
PCF11-204ENST00000530660 PGBD1Q96JS3 809 aa16.5■□□□□ 0.23
PCF11-204ENST00000530660 PARD6BQ9BYG5 372 aa16.5■□□□□ 0.23
PCF11-204ENST00000530660 CD163L1Q9NR16 1453 aa16.5■□□□□ 0.23
PCF11-204ENST00000530660 N4BP1O75113 896 aaKnown RBP16.5■□□□□ 0.23
PCF11-204ENST00000530660 EGFL6Q8IUX8 553 aa16.5■□□□□ 0.23
PCF11-204ENST00000530660 PDE11AQ9HCR9 933 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms