RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 ZNF330Q9Y3S2 320 aaPredicted RBP13.94□□□□□ -0.18
USP35-207ENST00000530546 STRCQ7RTU9 1775 aa13.94□□□□□ -0.18
USP35-207ENST00000530546 CRYBG1Q9Y4K1 1723 aa13.94□□□□□ -0.18
USP35-207ENST00000530546 EAF2Q96CJ1 260 aaPredicted RBP13.94□□□□□ -0.18
USP35-207ENST00000530546 COL5A2P05997 1499 aaPredicted RBP13.94□□□□□ -0.18
USP35-207ENST00000530546 A0A087WZG4 1122 aa13.93□□□□□ -0.18
USP35-207ENST00000530546 NBPF26B4DH59 902 aa13.93□□□□□ -0.18
USP35-207ENST00000530546 GOLGA6L22H0YM25 854 aa13.93□□□□□ -0.18
USP35-207ENST00000530546 MCM5P33992 734 aa13.93□□□□□ -0.18
USP35-207ENST00000530546 NBPF14Q5TI25 921 aa13.93□□□□□ -0.18
USP35-207ENST00000530546 NBPF10Q6P3W6 841 aaKnown RBP13.93□□□□□ -0.18
USP35-207ENST00000530546 NBPF15Q8N660 670 aa13.93□□□□□ -0.18
USP35-207ENST00000530546 GPATCH3Q96I76 525 aa13.93□□□□□ -0.18
USP35-207ENST00000530546 CARD10Q9BWT7 1032 aa13.93□□□□□ -0.18
USP35-207ENST00000530546 TLR7Q9NYK1 1049 aaKnown RBP13.93□□□□□ -0.18
USP35-207ENST00000530546 TTLL7Q6ZT98 887 aa13.93□□□□□ -0.18
USP35-207ENST00000530546 BCL11BQ9C0K0 894 aaPredicted RBP13.93□□□□□ -0.18
USP35-207ENST00000530546 DIAPH3Q9NSV4 1193 aa13.93□□□□□ -0.18
USP35-207ENST00000530546 TTC41PQ6P2S7 1318 aa13.93□□□□□ -0.18
USP35-207ENST00000530546 DMTNQ08495 405 aa13.92□□□□□ -0.18
USP35-207ENST00000530546 PKP1Q13835 747 aa13.92□□□□□ -0.18
USP35-207ENST00000530546 CLEC17AQ6ZS10 378 aa13.92□□□□□ -0.18
USP35-207ENST00000530546 CHMP3Q9Y3E7 222 aa13.92□□□□□ -0.18
USP35-207ENST00000530546 SGSM2O43147 1006 aa13.92□□□□□ -0.18
USP35-207ENST00000530546 KLHL40Q2TBA0 621 aa13.92□□□□□ -0.18
USP35-207ENST00000530546 ZBTB3Q9H5J0 574 aa13.92□□□□□ -0.18
USP35-207ENST00000530546 FOXD4L5Q5VV16 416 aaPredicted RBP13.92□□□□□ -0.18
USP35-207ENST00000530546 FOXD4L4Q8WXT5 416 aaPredicted RBP13.92□□□□□ -0.18
USP35-207ENST00000530546 BOLA2Q9H3K6 86 aa13.91□□□□□ -0.18
USP35-207ENST00000530546 MRC1P22897 1456 aa13.91□□□□□ -0.18
USP35-207ENST00000530546 ERVV-2B6SEH9 535 aa13.91□□□□□ -0.18
USP35-207ENST00000530546 PLBD2Q8NHP8 589 aa13.91□□□□□ -0.18
USP35-207ENST00000530546 TMX3Q96JJ7 454 aa13.91□□□□□ -0.18
USP35-207ENST00000530546 BTG4Q9NY30 223 aa13.91□□□□□ -0.18
USP35-207ENST00000530546 CCDC9Q9Y3X0 531 aaKnown RBP13.91□□□□□ -0.18
USP35-207ENST00000530546 ABCC6O95255 1503 aa13.91□□□□□ -0.18
USP35-207ENST00000530546 ZNF445P59923 1031 aa13.9□□□□□ -0.18
USP35-207ENST00000530546 CCDC94Q9BW85 323 aaPredicted RBP13.9□□□□□ -0.18
USP35-207ENST00000530546 USP42Q9H9J4 1324 aaKnown RBP13.9□□□□□ -0.18
USP35-207ENST00000530546 PDLIM2Q96JY6 352 aa13.9□□□□□ -0.18
USP35-207ENST00000530546 PKD1L3Q7Z443 1732 aa13.9□□□□□ -0.18
USP35-207ENST00000530546 TUBGCP6Q96RT7 1819 aa13.89□□□□□ -0.19
USP35-207ENST00000530546 HSPA4P34932 840 aa13.89□□□□□ -0.19
USP35-207ENST00000530546 SASS6Q6UVJ0 657 aa13.89□□□□□ -0.19
USP35-207ENST00000530546 ANAPC15P60006 121 aa13.89□□□□□ -0.19
USP35-207ENST00000530546 LMBR1LQ6UX01 489 aa13.89□□□□□ -0.19
USP35-207ENST00000530546 LARP6Q9BRS8 491 aaKnown RBP13.89□□□□□ -0.19
USP35-207ENST00000530546 LSG1Q9H089 658 aaKnown RBP13.89□□□□□ -0.19
USP35-207ENST00000530546 TMOD3Q9NYL9 352 aa13.89□□□□□ -0.19
USP35-207ENST00000530546 NUCB2P80303 420 aa13.88□□□□□ -0.19
USP35-207ENST00000530546 RAD50Q92878 1312 aa13.88□□□□□ -0.19
USP35-207ENST00000530546 BAG4O95429 457 aaKnown RBP13.88□□□□□ -0.19
USP35-207ENST00000530546 TFCP2Q12800 502 aa13.88□□□□□ -0.19
USP35-207ENST00000530546 ZKSCAN5Q9Y2L8 839 aa13.88□□□□□ -0.19
USP35-207ENST00000530546 PTH1RQ03431 593 aa13.87□□□□□ -0.19
USP35-207ENST00000530546 PTPN12Q05209 780 aaKnown RBP13.87□□□□□ -0.19
USP35-207ENST00000530546 NKX1-1Q15270 411 aaPredicted RBP13.87□□□□□ -0.19
USP35-207ENST00000530546 MCTP1Q6DN14 999 aa13.87□□□□□ -0.19
USP35-207ENST00000530546 RASEFQ8IZ41 740 aa13.87□□□□□ -0.19
USP35-207ENST00000530546 RUFY2Q8WXA3 655 aa13.87□□□□□ -0.19
USP35-207ENST00000530546 EVI5LQ96CN4 794 aa13.87□□□□□ -0.19
USP35-207ENST00000530546 EDC3Q96F86 508 aaKnown RBP13.87□□□□□ -0.19
USP35-207ENST00000530546 CPA1P15085 419 aa13.87□□□□□ -0.19
USP35-207ENST00000530546 CHAMP1Q96JM3 812 aa13.87□□□□□ -0.19
USP35-207ENST00000530546 FAM227BQ96M60 508 aa13.87□□□□□ -0.19
USP35-207ENST00000530546 FSD1Q9BTV5 496 aa13.87□□□□□ -0.19
USP35-207ENST00000530546 CWC22Q9HCG8 908 aaKnown RBP13.87□□□□□ -0.19
USP35-207ENST00000530546 ASAP1Q9ULH1 1129 aa13.87□□□□□ -0.19
USP35-207ENST00000530546 SNX14Q9Y5W7 946 aa13.87□□□□□ -0.19
USP35-207ENST00000530546 NDUFB9Q9Y6M9 179 aa13.87□□□□□ -0.19
USP35-207ENST00000530546 AK9Q5TCS8 1911 aa13.87□□□□□ -0.19
USP35-207ENST00000530546 RFX5P48382 616 aaPredicted RBP13.86□□□□□ -0.19
USP35-207ENST00000530546 PLEKHG2Q9H7P9 1386 aa13.86□□□□□ -0.19
USP35-207ENST00000530546 MCM2P49736 904 aa13.86□□□□□ -0.19
USP35-207ENST00000530546 CWC25Q9NXE8 425 aaPredicted RBP13.86□□□□□ -0.19
USP35-207ENST00000530546 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.86□□□□□ -0.19
USP35-207ENST00000530546 DDX49Q9Y6V7 483 aaKnown RBP13.86□□□□□ -0.19
USP35-207ENST00000530546 NMIQ13287 307 aaPredicted RBP13.86□□□□□ -0.19
USP35-207ENST00000530546 GTPBP4Q9BZE4 634 aaKnown RBP13.86□□□□□ -0.19
USP35-207ENST00000530546 COPRSQ9NQ92 184 aa13.86□□□□□ -0.19
USP35-207ENST00000530546 A0A0G2JS52 829 aa13.85□□□□□ -0.19
USP35-207ENST00000530546 KCNJ4P48050 445 aa13.85□□□□□ -0.19
USP35-207ENST00000530546 PRPF40BQ6NWY9 871 aaKnown RBP13.85□□□□□ -0.19
USP35-207ENST00000530546 KIF20AO95235 890 aa13.85□□□□□ -0.19
USP35-207ENST00000530546 ZSCAN20P17040 1043 aaPredicted RBP13.85□□□□□ -0.19
USP35-207ENST00000530546 CASP7P55210 303 aa13.85□□□□□ -0.19
USP35-207ENST00000530546 DNAJC10Q8IXB1 793 aa13.85□□□□□ -0.19
USP35-207ENST00000530546 PIGBQ92521 554 aa13.85□□□□□ -0.19
USP35-207ENST00000530546 SYTL4Q96C24 671 aaPredicted RBP13.85□□□□□ -0.19
USP35-207ENST00000530546 ZHX1Q9UKY1 873 aaPredicted RBP13.85□□□□□ -0.19
USP35-207ENST00000530546 PARP4Q9UKK3 1724 aaKnown RBP13.85□□□□□ -0.19
USP35-207ENST00000530546 RABL6Q3YEC7 729 aaPredicted RBP13.84□□□□□ -0.19
USP35-207ENST00000530546 TNNI3KQ59H18 835 aa13.84□□□□□ -0.19
USP35-207ENST00000530546 DBNLQ9UJU6 430 aaKnown RBP13.84□□□□□ -0.19
USP35-207ENST00000530546 ZDHHC9Q9Y397 364 aa13.84□□□□□ -0.19
USP35-207ENST00000530546 FPGT-TNNI3KV9GXZ4 949 aa13.84□□□□□ -0.19
USP35-207ENST00000530546 DBNDD2Q9BQY9 259 aa13.84□□□□□ -0.19
USP35-207ENST00000530546 H7C1W4 665 aa13.83□□□□□ -0.19
USP35-207ENST00000530546 CYP2E1P05181 493 aaPredicted RBP13.83□□□□□ -0.19
USP35-207ENST00000530546 CCDC85AQ96PX6 553 aaPredicted RBP13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms