RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 NSFL1CQ9UNZ2 370 aaKnown RBP14.55□□□□□ -0.08
SCN3B-206ENST00000530277 F13A1P00488 732 aa14.55□□□□□ -0.08
SCN3B-206ENST00000530277 TDO2P48775 406 aa14.55□□□□□ -0.08
SCN3B-206ENST00000530277 MYOM2P54296 1465 aa14.55□□□□□ -0.08
SCN3B-206ENST00000530277 PLEKHG3A1L390 1219 aa14.54□□□□□ -0.08
SCN3B-206ENST00000530277 RRP9O43818 475 aaKnown RBP14.54□□□□□ -0.08
SCN3B-206ENST00000530277 PIP4K2BP78356 416 aa14.54□□□□□ -0.08
SCN3B-206ENST00000530277 IFIT5Q13325 482 aaKnown RBP14.54□□□□□ -0.08
SCN3B-206ENST00000530277 OTUD7BQ6GQQ9 843 aa14.54□□□□□ -0.08
SCN3B-206ENST00000530277 TBX22Q9Y458 520 aa14.54□□□□□ -0.08
SCN3B-206ENST00000530277 TMEM2Q9UHN6 1383 aa14.54□□□□□ -0.08
SCN3B-206ENST00000530277 GOLGA8BA8MQT2 603 aa14.54□□□□□ -0.08
SCN3B-206ENST00000530277 MARCH6O60337 910 aa14.54□□□□□ -0.08
SCN3B-206ENST00000530277 APOBRQ0VD83 1088 aa14.54□□□□□ -0.08
SCN3B-206ENST00000530277 LRP2BPQ9P2M1 347 aa14.54□□□□□ -0.08
SCN3B-206ENST00000530277 CROCC2H7BZ55 1655 aa14.54□□□□□ -0.08
SCN3B-206ENST00000530277 E9PCH4 1651 aa14.54□□□□□ -0.08
SCN3B-206ENST00000530277 FAM89AQ96GI7 184 aa14.54□□□□□ -0.08
SCN3B-206ENST00000530277 SH2B1Q9NRF2 756 aaPredicted RBP14.54□□□□□ -0.08
SCN3B-206ENST00000530277 SGSM2O43147 1006 aa14.53□□□□□ -0.08
SCN3B-206ENST00000530277 LETM1O95202 739 aaPredicted RBP14.53□□□□□ -0.08
SCN3B-206ENST00000530277 UBE2HP62256 183 aa14.53□□□□□ -0.08
SCN3B-206ENST00000530277 SBNO1A3KN83 1393 aa14.53□□□□□ -0.08
SCN3B-206ENST00000530277 G3V3G9 751 aa14.53□□□□□ -0.08
SCN3B-206ENST00000530277 SERPINC1P01008 464 aa14.53□□□□□ -0.08
SCN3B-206ENST00000530277 ZNF165P49910 485 aa14.53□□□□□ -0.08
SCN3B-206ENST00000530277 ADCK5Q3MIX3 580 aa14.53□□□□□ -0.08
SCN3B-206ENST00000530277 DCAF8Q5TAQ9 597 aa14.53□□□□□ -0.08
SCN3B-206ENST00000530277 TLR7Q9NYK1 1049 aaKnown RBP14.53□□□□□ -0.08
SCN3B-206ENST00000530277 KRT32Q14532 448 aa14.53□□□□□ -0.08
SCN3B-206ENST00000530277 ZNF790Q6PG37 636 aa14.53□□□□□ -0.08
SCN3B-206ENST00000530277 GPT2Q8TD30 523 aa14.53□□□□□ -0.08
SCN3B-206ENST00000530277 AIDAQ96BJ3 306 aa14.53□□□□□ -0.08
SCN3B-206ENST00000530277 EAF2Q96CJ1 260 aaPredicted RBP14.53□□□□□ -0.08
SCN3B-206ENST00000530277 U3KPZ7 1027 aaPredicted RBP14.53□□□□□ -0.08
SCN3B-206ENST00000530277 MADDQ8WXG6 1647 aa14.53□□□□□ -0.08
SCN3B-206ENST00000530277 IMMTQ16891 758 aaKnown RBP14.52□□□□□ -0.08
SCN3B-206ENST00000530277 LUZP1Q86V48 1076 aa14.52□□□□□ -0.08
SCN3B-206ENST00000530277 FSIP1Q8NA03 581 aa14.52□□□□□ -0.08
SCN3B-206ENST00000530277 ZNF396Q96N95 335 aaPredicted RBP14.52□□□□□ -0.08
SCN3B-206ENST00000530277 DNAJC25Q9H1X3 360 aa14.52□□□□□ -0.08
SCN3B-206ENST00000530277 RAI14Q9P0K7 980 aa14.52□□□□□ -0.08
SCN3B-206ENST00000530277 JAK2O60674 1132 aa14.52□□□□□ -0.08
SCN3B-206ENST00000530277 TPM2P07951 284 aa14.52□□□□□ -0.08
SCN3B-206ENST00000530277 ACSBG1Q96GR2 724 aa14.52□□□□□ -0.08
SCN3B-206ENST00000530277 CFAP45Q9UL16 551 aa14.52□□□□□ -0.08
SCN3B-206ENST00000530277 TSPOAP1O95153 1857 aa14.52□□□□□ -0.09
SCN3B-206ENST00000530277 C8orf76Q96K31 380 aa14.52□□□□□ -0.09
SCN3B-206ENST00000530277 PCMTD1Q96MG8 357 aaPredicted RBP14.52□□□□□ -0.09
SCN3B-206ENST00000530277 CWC25Q9NXE8 425 aaPredicted RBP14.52□□□□□ -0.09
SCN3B-206ENST00000530277 MAP3K4Q9Y6R4 1608 aa14.52□□□□□ -0.09
SCN3B-206ENST00000530277 KIF1BO60333 1816 aa14.51□□□□□ -0.09
SCN3B-206ENST00000530277 ZNF771Q7L3S4 317 aaPredicted RBP14.51□□□□□ -0.09
SCN3B-206ENST00000530277 ANO6Q4KMQ2 910 aa14.51□□□□□ -0.09
SCN3B-206ENST00000530277 KLHL10Q6JEL2 608 aa14.51□□□□□ -0.09
SCN3B-206ENST00000530277 SCAND2PQ9GZW5 306 aaPredicted RBP14.51□□□□□ -0.09
SCN3B-206ENST00000530277 MARCKSP29966 332 aaPredicted RBP14.5□□□□□ -0.09
SCN3B-206ENST00000530277 CBX1P83916 185 aa14.5□□□□□ -0.09
SCN3B-206ENST00000530277 SLFNL1Q499Z3 407 aa14.5□□□□□ -0.09
SCN3B-206ENST00000530277 CCDC34Q96HJ3 373 aa14.5□□□□□ -0.09
SCN3B-206ENST00000530277 CCDC171Q6TFL3 1326 aa14.5□□□□□ -0.09
SCN3B-206ENST00000530277 EFCAB6Q5THR3 1501 aa14.5□□□□□ -0.09
SCN3B-206ENST00000530277 ANAPC15P60006 121 aa14.5□□□□□ -0.09
SCN3B-206ENST00000530277 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.5□□□□□ -0.09
SCN3B-206ENST00000530277 DDX21Q9NR30 783 aaKnown RBP eCLIP14.5□□□□□ -0.09
SCN3B-206ENST00000530277 ORC3Q9UBD5 711 aaPredicted RBP14.5□□□□□ -0.09
SCN3B-206ENST00000530277 JAG2Q9Y219 1238 aa14.5□□□□□ -0.09
SCN3B-206ENST00000530277 A0A087WWV3 80 aa14.49□□□□□ -0.09
SCN3B-206ENST00000530277 A0A0D9SFI3 127 aa14.49□□□□□ -0.09
SCN3B-206ENST00000530277 ZNF213O14771 459 aa14.49□□□□□ -0.09
SCN3B-206ENST00000530277 CCDC186Q7Z3E2 898 aa14.49□□□□□ -0.09
SCN3B-206ENST00000530277 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.49□□□□□ -0.09
SCN3B-206ENST00000530277 V9GYY5 206 aaPredicted RBP14.49□□□□□ -0.09
SCN3B-206ENST00000530277 CCDC69A6NI79 296 aa14.49□□□□□ -0.09
SCN3B-206ENST00000530277 NAT10Q9H0A0 1025 aaKnown RBP14.49□□□□□ -0.09
SCN3B-206ENST00000530277 UNC13BO14795 1591 aa14.49□□□□□ -0.09
SCN3B-206ENST00000530277 ABCA6Q8N139 1617 aa14.49□□□□□ -0.09
SCN3B-206ENST00000530277 KLF18A0A0U1RQI7 1052 aa14.49□□□□□ -0.09
SCN3B-206ENST00000530277 SPDYE4A6NLX3 237 aa14.49□□□□□ -0.09
SCN3B-206ENST00000530277 ALDH1L1O75891 902 aa14.49□□□□□ -0.09
SCN3B-206ENST00000530277 CLIP2Q9UDT6 1046 aa14.49□□□□□ -0.09
SCN3B-206ENST00000530277 ABCC3O15438 1527 aa14.49□□□□□ -0.09
SCN3B-206ENST00000530277 CDC37L1Q7L3B6 337 aa14.49□□□□□ -0.09
SCN3B-206ENST00000530277 CCAR1Q8IX12 1150 aaKnown RBP14.49□□□□□ -0.09
SCN3B-206ENST00000530277 GIGYF1O75420 1035 aaPredicted RBP14.48□□□□□ -0.09
SCN3B-206ENST00000530277 STARD3NLO95772 234 aa14.48□□□□□ -0.09
SCN3B-206ENST00000530277 OLFM4Q6UX06 510 aa14.48□□□□□ -0.09
SCN3B-206ENST00000530277 PLXNC1O60486 1568 aa14.48□□□□□ -0.09
SCN3B-206ENST00000530277 RNF17Q9BXT8 1623 aaKnown RBP14.48□□□□□ -0.09
SCN3B-206ENST00000530277 IGSF3O75054 1194 aa14.48□□□□□ -0.09
SCN3B-206ENST00000530277 RUFY3Q7L099 469 aa14.48□□□□□ -0.09
SCN3B-206ENST00000530277 CEP57L1Q8IYX8 460 aa14.48□□□□□ -0.09
SCN3B-206ENST00000530277 KIF2CQ99661 725 aa14.48□□□□□ -0.09
SCN3B-206ENST00000530277 NAPBQ9H115 298 aa14.48□□□□□ -0.09
SCN3B-206ENST00000530277 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.48□□□□□ -0.09
SCN3B-206ENST00000530277 SART3Q15020 963 aaKnown RBP14.47□□□□□ -0.09
SCN3B-206ENST00000530277 ME3Q16798 604 aa14.47□□□□□ -0.09
SCN3B-206ENST00000530277 CFAP100Q494V2 611 aa14.47□□□□□ -0.09
SCN3B-206ENST00000530277 BEND3Q5T5X7 828 aa14.47□□□□□ -0.09
SCN3B-206ENST00000530277 ZCRB1Q8TBF4 217 aaKnown RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms