RNA–Protein interactions for RNA: ENST00000530226.1

SIPA1-206, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 2

Gene SIPA1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-206ENST00000530226 NTSR2O95665 410 aa18.39■□□□□ 0.53
SIPA1-206ENST00000530226 ERFEQ4G0M1 354 aa18.39■□□□□ 0.53
SIPA1-206ENST00000530226 RPGRQ92834 1020 aaKnown RBP18.39■□□□□ 0.53
SIPA1-206ENST00000530226 CHPF2Q9P2E5 772 aa18.39■□□□□ 0.53
SIPA1-206ENST00000530226 ZNF316A6NFI3 1004 aaPredicted RBP18.38■□□□□ 0.53
SIPA1-206ENST00000530226 XAGE3Q8WTP9 111 aa18.38■□□□□ 0.53
SIPA1-206ENST00000530226 MBIPQ9NS73 344 aa18.38■□□□□ 0.53
SIPA1-206ENST00000530226 GNAI1P63096 354 aa18.37■□□□□ 0.53
SIPA1-206ENST00000530226 AIMP1Q12904 312 aaKnown RBP18.37■□□□□ 0.53
SIPA1-206ENST00000530226 SUSD4Q5VX71 490 aa18.37■□□□□ 0.53
SIPA1-206ENST00000530226 COPS6Q7L5N1 327 aa18.37■□□□□ 0.53
SIPA1-206ENST00000530226 DBF4Q9UBU7 674 aaPredicted RBP18.37■□□□□ 0.53
SIPA1-206ENST00000530226 FKBP4Q02790 459 aaKnown RBP eCLIP18.36■□□□□ 0.53
SIPA1-206ENST00000530226 RTKN2Q8IZC4 609 aa18.36■□□□□ 0.53
SIPA1-206ENST00000530226 C7orf43Q8WVR3 580 aa18.36■□□□□ 0.53
SIPA1-206ENST00000530226 UTP14AQ9BVJ6 771 aaKnown RBP18.36■□□□□ 0.53
SIPA1-206ENST00000530226 POTECB2RU33 542 aa18.35■□□□□ 0.53
SIPA1-206ENST00000530226 ANP32CO43423 234 aa18.35■□□□□ 0.53
SIPA1-206ENST00000530226 ZNF853P0CG23 659 aa18.35■□□□□ 0.53
SIPA1-206ENST00000530226 VEGFAP15692 232 aaPredicted RBP18.35■□□□□ 0.53
SIPA1-206ENST00000530226 HTRA3P83110 453 aa18.35■□□□□ 0.53
SIPA1-206ENST00000530226 DUSP27Q5VZP5 1158 aa18.35■□□□□ 0.53
SIPA1-206ENST00000530226 DPY19L2Q6NUT2 758 aa18.35■□□□□ 0.53
SIPA1-206ENST00000530226 SNED1Q8TER0 1413 aa18.34■□□□□ 0.53
SIPA1-206ENST00000530226 HOXA10P31260 410 aaPredicted RBP18.34■□□□□ 0.53
SIPA1-206ENST00000530226 CC2D2BQ6DHV5 1058 aa18.34■□□□□ 0.53
SIPA1-206ENST00000530226 HYPKQ9NX55 129 aa18.34■□□□□ 0.53
SIPA1-206ENST00000530226 DDX60Q8IY21 1712 aaKnown RBP18.34■□□□□ 0.53
SIPA1-206ENST00000530226 NLRP10Q86W26 655 aa18.33■□□□□ 0.52
SIPA1-206ENST00000530226 SMC1BQ8NDV3 1235 aa18.33■□□□□ 0.52
SIPA1-206ENST00000530226 RBM17Q96I25 401 aaKnown RBP18.33■□□□□ 0.52
SIPA1-206ENST00000530226 NLRP3Q96P20 1036 aa18.33■□□□□ 0.52
SIPA1-206ENST00000530226 MRS2Q9HD23 443 aa18.33■□□□□ 0.52
SIPA1-206ENST00000530226 SCN4AP35499 1836 aa18.33■□□□□ 0.52
SIPA1-206ENST00000530226 TCIRG1Q13488 830 aa18.32■□□□□ 0.52
SIPA1-206ENST00000530226 GRIPAP1Q4V328 841 aa18.32■□□□□ 0.52
SIPA1-206ENST00000530226 JMYQ8N9B5 988 aa18.32■□□□□ 0.52
SIPA1-206ENST00000530226 PLBD2Q8NHP8 589 aa18.32■□□□□ 0.52
SIPA1-206ENST00000530226 KLRG1Q96E93 195 aa18.32■□□□□ 0.52
SIPA1-206ENST00000530226 CRAMP1Q96RY5 1269 aa18.32■□□□□ 0.52
SIPA1-206ENST00000530226 CHMP4AQ9BY43 222 aa18.32■□□□□ 0.52
SIPA1-206ENST00000530226 SH3TC1Q8TE82 1336 aa18.31■□□□□ 0.52
SIPA1-206ENST00000530226 PPEF1O14829 653 aaPredicted RBP18.31■□□□□ 0.52
SIPA1-206ENST00000530226 CCDC184Q52MB2 194 aa18.31■□□□□ 0.52
SIPA1-206ENST00000530226 OLFM4Q6UX06 510 aa18.31■□□□□ 0.52
SIPA1-206ENST00000530226 PSMD1Q99460 953 aa18.31■□□□□ 0.52
SIPA1-206ENST00000530226 ZNF277Q9NRM2 450 aaPredicted RBP18.31■□□□□ 0.52
SIPA1-206ENST00000530226 GOLGA2Q08379 1002 aa18.3■□□□□ 0.52
SIPA1-206ENST00000530226 CCDC27Q2M243 656 aa18.3■□□□□ 0.52
SIPA1-206ENST00000530226 TRMT112Q9UI30 125 aaKnown RBP18.3■□□□□ 0.52
SIPA1-206ENST00000530226 LRRC37AA6NMS7 1700 aa18.29■□□□□ 0.52
SIPA1-206ENST00000530226 IARSP41252 1262 aaKnown RBP18.29■□□□□ 0.52
SIPA1-206ENST00000530226 SLC10A5Q5PT55 438 aa18.29■□□□□ 0.52
SIPA1-206ENST00000530226 ANKRD13DQ6ZTN6 518 aa18.29■□□□□ 0.52
SIPA1-206ENST00000530226 C3orf67Q6ZVT6 689 aa18.29■□□□□ 0.52
SIPA1-206ENST00000530226 TMX4Q9H1E5 349 aaPredicted RBP18.29■□□□□ 0.52
SIPA1-206ENST00000530226 ABCC4O15439 1325 aa18.28■□□□□ 0.52
SIPA1-206ENST00000530226 IQCA1LA6NCM1 817 aa18.27■□□□□ 0.52
SIPA1-206ENST00000530226 HCLS1P14317 486 aaPredicted RBP18.26■□□□□ 0.51
SIPA1-206ENST00000530226 NCBP3Q53F19 620 aaKnown RBP18.26■□□□□ 0.51
SIPA1-206ENST00000530226 CCDC30Q5VVM6 783 aa18.26■□□□□ 0.51
SIPA1-206ENST00000530226 SYNE4Q8N205 404 aa18.26■□□□□ 0.51
SIPA1-206ENST00000530226 JDP2Q8WYK2 163 aa18.26■□□□□ 0.51
SIPA1-206ENST00000530226 ISCA1Q9BUE6 129 aa18.26■□□□□ 0.51
SIPA1-206ENST00000530226 IL16Q14005 1332 aa18.25■□□□□ 0.51
SIPA1-206ENST00000530226 ZNF541Q9H0D2 1346 aa18.25■□□□□ 0.51
SIPA1-206ENST00000530226 ELL2O00472 640 aaPredicted RBP18.25■□□□□ 0.51
SIPA1-206ENST00000530226 DDNO94850 711 aaPredicted RBP18.25■□□□□ 0.51
SIPA1-206ENST00000530226 DDX46Q7L014 1031 aaKnown RBP18.25■□□□□ 0.51
SIPA1-206ENST00000530226 RIC3Q7Z5B4 369 aa18.25■□□□□ 0.51
SIPA1-206ENST00000530226 WWC1Q8IX03 1113 aa18.25■□□□□ 0.51
SIPA1-206ENST00000530226 C8orf58Q8NAV2 365 aa18.25■□□□□ 0.51
SIPA1-206ENST00000530226 L3MBTL3Q96JM7 780 aaPredicted RBP18.25■□□□□ 0.51
SIPA1-206ENST00000530226 DDX58O95786 925 aaKnown RBP18.24■□□□□ 0.51
SIPA1-206ENST00000530226 TSR2Q969E8 191 aaKnown RBP18.24■□□□□ 0.51
SIPA1-206ENST00000530226 ATP6V0A2Q9Y487 856 aa18.24■□□□□ 0.51
SIPA1-206ENST00000530226 COL4A5P29400 1685 aa18.24■□□□□ 0.51
SIPA1-206ENST00000530226 TAF1P21675 1872 aa18.23■□□□□ 0.51
SIPA1-206ENST00000530226 ATP5J2-PTCD1G3V325 749 aa18.23■□□□□ 0.51
SIPA1-206ENST00000530226 TCERG1O14776 1098 aaKnown RBP18.23■□□□□ 0.51
SIPA1-206ENST00000530226 CACNA1FO60840 1977 aa18.22■□□□□ 0.51
SIPA1-206ENST00000530226 FZD9O00144 591 aa18.22■□□□□ 0.51
SIPA1-206ENST00000530226 BBOX1O75936 387 aa18.22■□□□□ 0.51
SIPA1-206ENST00000530226 HSP90B1P14625 803 aaKnown RBP18.22■□□□□ 0.51
SIPA1-206ENST00000530226 TRIM28Q13263 835 aaKnown RBP18.22■□□□□ 0.51
SIPA1-206ENST00000530226 GRAPQ13588 217 aa18.22■□□□□ 0.51
SIPA1-206ENST00000530226 TMC4Q7Z404 712 aa18.22■□□□□ 0.51
SIPA1-206ENST00000530226 LARGE2Q8N3Y3 721 aa18.22■□□□□ 0.51
SIPA1-206ENST00000530226 GRAPLQ8TC17 118 aaPredicted RBP18.22■□□□□ 0.51
SIPA1-206ENST00000530226 STK31Q9BXU1 1019 aa18.22■□□□□ 0.51
SIPA1-206ENST00000530226 EIF6P56537 245 aaKnown RBP18.21■□□□□ 0.51
SIPA1-206ENST00000530226 GPC2Q8N158 579 aa18.21■□□□□ 0.51
SIPA1-206ENST00000530226 SUPT20HQ8NEM7 779 aa18.21■□□□□ 0.51
SIPA1-206ENST00000530226 FAM89AQ96GI7 184 aa18.21■□□□□ 0.51
SIPA1-206ENST00000530226 PHAXQ9H814 394 aaKnown RBP18.21■□□□□ 0.51
SIPA1-206ENST00000530226 ADAMTSL1Q8N6G6 1762 aa18.21■□□□□ 0.51
SIPA1-206ENST00000530226 DUOX1Q9NRD9 1551 aa18.21■□□□□ 0.51
SIPA1-206ENST00000530226 MYH3P11055 1940 aa18.2■□□□□ 0.5
SIPA1-206ENST00000530226 PPIP5K2O43314 1243 aa18.2■□□□□ 0.5
SIPA1-206ENST00000530226 POTEIP0CG38 1075 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms