RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 ARFGEF2Q9Y6D5 1785 aa18.03■□□□□ 0.48
TTC39A-216ENST00000530004 IGKV5-2P06315 115 aa18.02■□□□□ 0.48
TTC39A-216ENST00000530004 TBC1D9BQ66K14 1250 aa18.02■□□□□ 0.48
TTC39A-216ENST00000530004 NLGN1Q8N2Q7 840 aa18.02■□□□□ 0.48
TTC39A-216ENST00000530004 SLC16A10Q8TF71 515 aa18.02■□□□□ 0.48
TTC39A-216ENST00000530004 GPTP24298 496 aa18.02■□□□□ 0.47
TTC39A-216ENST00000530004 TRIM28Q13263 835 aaKnown RBP18.02■□□□□ 0.47
TTC39A-216ENST00000530004 CWF19L2Q2TBE0 894 aaKnown RBP18.02■□□□□ 0.47
TTC39A-216ENST00000530004 SIRT2Q8IXJ6 389 aa18.02■□□□□ 0.47
TTC39A-216ENST00000530004 NIP7Q9Y221 180 aaKnown RBP eCLIP18.02■□□□□ 0.47
TTC39A-216ENST00000530004 GNAI3P08754 354 aa18.01■□□□□ 0.47
TTC39A-216ENST00000530004 BICDL1Q6ZP65 573 aa18.01■□□□□ 0.47
TTC39A-216ENST00000530004 UBN2Q6ZU65 1347 aa18.01■□□□□ 0.47
TTC39A-216ENST00000530004 NEURL1BA8MQ27 555 aa18■□□□□ 0.47
TTC39A-216ENST00000530004 GNAI2P04899 355 aa18■□□□□ 0.47
TTC39A-216ENST00000530004 NFIXQ14938 502 aa18■□□□□ 0.47
TTC39A-216ENST00000530004 CEP85Q6P2H3 762 aa18■□□□□ 0.47
TTC39A-216ENST00000530004 SMC5Q8IY18 1101 aa18■□□□□ 0.47
TTC39A-216ENST00000530004 PDZRN3Q9UPQ7 1066 aa18■□□□□ 0.47
TTC39A-216ENST00000530004 ALDH1L1O75891 902 aa17.99■□□□□ 0.47
TTC39A-216ENST00000530004 TM4SF1P30408 202 aa17.99■□□□□ 0.47
TTC39A-216ENST00000530004 RGS3P49796 1198 aa17.99■□□□□ 0.47
TTC39A-216ENST00000530004 MSL1Q68DK7 614 aa17.99■□□□□ 0.47
TTC39A-216ENST00000530004 NLRP10Q86W26 655 aa17.99■□□□□ 0.47
TTC39A-216ENST00000530004 RPAP2Q8IXW5 612 aaPredicted RBP17.99■□□□□ 0.47
TTC39A-216ENST00000530004 ANKRD44Q8N8A2 993 aa17.99■□□□□ 0.47
TTC39A-216ENST00000530004 CCDC191Q8NCU4 936 aa17.99■□□□□ 0.47
TTC39A-216ENST00000530004 SETDB2Q96T68 719 aa17.99■□□□□ 0.47
TTC39A-216ENST00000530004 NUP98P52948 1817 aa17.99■□□□□ 0.47
TTC39A-216ENST00000530004 PARP10Q53GL7 1025 aa17.99■□□□□ 0.47
TTC39A-216ENST00000530004 USP44Q9H0E7 712 aa17.99■□□□□ 0.47
TTC39A-216ENST00000530004 GCKRQ14397 625 aa17.98■□□□□ 0.47
TTC39A-216ENST00000530004 CWC25Q9NXE8 425 aaPredicted RBP17.98■□□□□ 0.47
TTC39A-216ENST00000530004 UBTFL1P0CB47 393 aaPredicted RBP17.97■□□□□ 0.47
TTC39A-216ENST00000530004 SUSD4Q5VX71 490 aa17.97■□□□□ 0.47
TTC39A-216ENST00000530004 CASZ1Q86V15 1759 aa17.97■□□□□ 0.47
TTC39A-216ENST00000530004 ZBTB7AO95365 584 aa17.96■□□□□ 0.47
TTC39A-216ENST00000530004 GCC1Q96CN9 775 aa17.96■□□□□ 0.47
TTC39A-216ENST00000530004 MTFR1LQ9H019 292 aa17.96■□□□□ 0.47
TTC39A-216ENST00000530004 CARMIL3Q8ND23 1372 aa17.96■□□□□ 0.47
TTC39A-216ENST00000530004 IBTKQ9P2D0 1353 aaPredicted RBP17.96■□□□□ 0.47
TTC39A-216ENST00000530004 DDR1Q08345 913 aa17.96■□□□□ 0.47
TTC39A-216ENST00000530004 FAM177BA6PVY3 158 aa17.95■□□□□ 0.46
TTC39A-216ENST00000530004 POLRMTO00411 1230 aaKnown RBP17.95■□□□□ 0.46
TTC39A-216ENST00000530004 MMP10P09238 476 aa17.95■□□□□ 0.46
TTC39A-216ENST00000530004 ANKRD36CQ5JPF3 1778 aa17.95■□□□□ 0.46
TTC39A-216ENST00000530004 PPP1R42Q7Z4L9 355 aa17.95■□□□□ 0.46
TTC39A-216ENST00000530004 LRRFIP2Q9Y608 721 aaKnown RBP17.95■□□□□ 0.46
TTC39A-216ENST00000530004 NTSR2O95665 410 aa17.94■□□□□ 0.46
TTC39A-216ENST00000530004 UTP14AQ9BVJ6 771 aaKnown RBP17.94■□□□□ 0.46
TTC39A-216ENST00000530004 GRM8O00222 908 aa17.94■□□□□ 0.46
TTC39A-216ENST00000530004 SERPINB2P05120 415 aa17.94■□□□□ 0.46
TTC39A-216ENST00000530004 NBPF7P0C2Y1 421 aaPredicted RBP17.94■□□□□ 0.46
TTC39A-216ENST00000530004 NUCB1Q02818 461 aa17.94■□□□□ 0.46
TTC39A-216ENST00000530004 NBPF5PQ86XG9 351 aaPredicted RBP17.94■□□□□ 0.46
TTC39A-216ENST00000530004 ZBTB38Q8NAP3 1195 aaPredicted RBP17.94■□□□□ 0.46
TTC39A-216ENST00000530004 C9orf78Q9NZ63 289 aaPredicted RBP17.94■□□□□ 0.46
TTC39A-216ENST00000530004 TRMT112Q9UI30 125 aaKnown RBP17.94■□□□□ 0.46
TTC39A-216ENST00000530004 H7C1W4 665 aa17.93■□□□□ 0.46
TTC39A-216ENST00000530004 HMMRO75330 724 aa17.93■□□□□ 0.46
TTC39A-216ENST00000530004 PCCAP05165 728 aaPredicted RBP17.93■□□□□ 0.46
TTC39A-216ENST00000530004 TPTE2Q6XPS3 522 aa17.93■□□□□ 0.46
TTC39A-216ENST00000530004 NYXQ9GZU5 481 aa17.93■□□□□ 0.46
TTC39A-216ENST00000530004 ATF5Q9Y2D1 282 aaPredicted RBP17.93■□□□□ 0.46
TTC39A-216ENST00000530004 PARP3Q9Y6F1 533 aa17.93■□□□□ 0.46
TTC39A-216ENST00000530004 UTYO14607 1347 aa17.92■□□□□ 0.46
TTC39A-216ENST00000530004 FAM89AQ96GI7 184 aa17.92■□□□□ 0.46
TTC39A-216ENST00000530004 DCTPP1Q9H773 170 aa17.92■□□□□ 0.46
TTC39A-216ENST00000530004 SH3TC1Q8TE82 1336 aa17.92■□□□□ 0.46
TTC39A-216ENST00000530004 RTL5Q5HYW3 569 aaPredicted RBP17.91■□□□□ 0.46
TTC39A-216ENST00000530004 UBE3BQ7Z3V4 1068 aa17.91■□□□□ 0.46
TTC39A-216ENST00000530004 NUTM1Q86Y26 1132 aa17.91■□□□□ 0.46
TTC39A-216ENST00000530004 JARID2Q92833 1246 aaPredicted RBP17.91■□□□□ 0.46
TTC39A-216ENST00000530004 COL24A1Q17RW2 1714 aa17.91■□□□□ 0.46
TTC39A-216ENST00000530004 CASP7P55210 303 aa17.91■□□□□ 0.46
TTC39A-216ENST00000530004 ANKRD45Q5TZF3 282 aa17.91■□□□□ 0.46
TTC39A-216ENST00000530004 CHD1LQ86WJ1 897 aa17.91■□□□□ 0.46
TTC39A-216ENST00000530004 SYNE4Q8N205 404 aa17.91■□□□□ 0.46
TTC39A-216ENST00000530004 CNBD1Q8NA66 436 aa17.91■□□□□ 0.46
TTC39A-216ENST00000530004 GTF2E1P29083 439 aaPredicted RBP17.9■□□□□ 0.46
TTC39A-216ENST00000530004 ATP8B2P98198 1209 aa17.9■□□□□ 0.46
TTC39A-216ENST00000530004 PRR5LQ6MZQ0 368 aa17.9■□□□□ 0.46
TTC39A-216ENST00000530004 LNPKQ9C0E8 428 aa17.9■□□□□ 0.46
TTC39A-216ENST00000530004 AFDNP55196 1824 aaKnown RBP17.9■□□□□ 0.46
TTC39A-216ENST00000530004 PNMA6EA0A0J9YXQ4 647 aa17.89■□□□□ 0.45
TTC39A-216ENST00000530004 NPHP1O15259 732 aa17.89■□□□□ 0.45
TTC39A-216ENST00000530004 PDE4AP27815 886 aa17.89■□□□□ 0.45
TTC39A-216ENST00000530004 ERFEQ4G0M1 354 aa17.89■□□□□ 0.45
TTC39A-216ENST00000530004 SGIP1Q9BQI5 828 aa17.89■□□□□ 0.45
TTC39A-216ENST00000530004 CDHR2Q9BYE9 1310 aa17.89■□□□□ 0.45
TTC39A-216ENST00000530004 POLD1P28340 1107 aa17.89■□□□□ 0.45
TTC39A-216ENST00000530004 IRS4O14654 1257 aaPredicted RBP17.88■□□□□ 0.45
TTC39A-216ENST00000530004 CCDC24Q8N4L8 307 aa17.88■□□□□ 0.45
TTC39A-216ENST00000530004 HDAC5Q9UQL6 1122 aa17.88■□□□□ 0.45
TTC39A-216ENST00000530004 PTGER2P43116 358 aa17.87■□□□□ 0.45
TTC39A-216ENST00000530004 SLC10A5Q5PT55 438 aa17.87■□□□□ 0.45
TTC39A-216ENST00000530004 SUCLG2Q96I99 432 aa17.87■□□□□ 0.45
TTC39A-216ENST00000530004 SPON1Q9HCB6 807 aa17.87■□□□□ 0.45
TTC39A-216ENST00000530004 ABCC12Q96J65 1359 aa17.87■□□□□ 0.45
TTC39A-216ENST00000530004 ST5P78524 1137 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms