RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 LRRC27Q9C0I9 530 aa9.8□□□□□ -0.84
CTNND1-221ENST00000529873 BMP2KLQ5H9B9 411 aa9.8□□□□□ -0.84
CTNND1-221ENST00000529873 KANK3Q6NY19 840 aa9.8□□□□□ -0.84
CTNND1-221ENST00000529873 TNPO1Q92973 898 aaKnown RBP9.8□□□□□ -0.84
CTNND1-221ENST00000529873 NEK1Q96PY6 1258 aa9.8□□□□□ -0.84
CTNND1-221ENST00000529873 WDHD1O75717 1129 aaPredicted RBP9.79□□□□□ -0.84
CTNND1-221ENST00000529873 HLA-DOAP06340 250 aa9.79□□□□□ -0.84
CTNND1-221ENST00000529873 UBXN4Q92575 508 aa9.79□□□□□ -0.84
CTNND1-221ENST00000529873 DMRT2Q9Y5R5 561 aa9.79□□□□□ -0.84
CTNND1-221ENST00000529873 FOXO3O43524 673 aa9.79□□□□□ -0.84
CTNND1-221ENST00000529873 ESPNB1AK53 854 aa9.79□□□□□ -0.84
CTNND1-221ENST00000529873 TMCO3Q6UWJ1 677 aa9.79□□□□□ -0.84
CTNND1-221ENST00000529873 CRNKL1Q9BZJ0 848 aaKnown RBP9.79□□□□□ -0.84
CTNND1-221ENST00000529873 CFAP43Q8NDM7 1665 aa9.79□□□□□ -0.84
CTNND1-221ENST00000529873 STX6O43752 255 aa9.79□□□□□ -0.84
CTNND1-221ENST00000529873 NUCB1Q02818 461 aa9.79□□□□□ -0.84
CTNND1-221ENST00000529873 PPM1EQ8WY54 764 aa9.79□□□□□ -0.84
CTNND1-221ENST00000529873 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.79□□□□□ -0.847e-6■□□□□ 8.3
CTNND1-221ENST00000529873 FAM107BQ9H098 131 aa9.79□□□□□ -0.84
CTNND1-221ENST00000529873 MSH6P52701 1360 aa9.79□□□□□ -0.84
CTNND1-221ENST00000529873 IARSP41252 1262 aaKnown RBP9.78□□□□□ -0.84
CTNND1-221ENST00000529873 GSDMDP57764 484 aa9.78□□□□□ -0.84
CTNND1-221ENST00000529873 STXBP4Q6ZWJ1 553 aa9.78□□□□□ -0.84
CTNND1-221ENST00000529873 ZNF622Q969S3 477 aaKnown RBP eCLIP9.78□□□□□ -0.843e-7■□□□□ 10.1
CTNND1-221ENST00000529873 ALS2CR12Q96Q35 445 aa9.78□□□□□ -0.84
CTNND1-221ENST00000529873 CALCOCO1Q9P1Z2 691 aa9.78□□□□□ -0.84
CTNND1-221ENST00000529873 ZNF608Q9ULD9 1512 aaPredicted RBP9.78□□□□□ -0.84
CTNND1-221ENST00000529873 PLCH2O75038 1416 aa9.78□□□□□ -0.84
CTNND1-221ENST00000529873 POTEB2H3BUK9 544 aa9.78□□□□□ -0.84
CTNND1-221ENST00000529873 TTLL12Q14166 644 aaPredicted RBP9.78□□□□□ -0.84
CTNND1-221ENST00000529873 ARHGAP45Q92619 1136 aa9.78□□□□□ -0.84
CTNND1-221ENST00000529873 TBC1D2Q9BYX2 928 aa9.78□□□□□ -0.84
CTNND1-221ENST00000529873 KRT23Q9C075 422 aa9.78□□□□□ -0.84
CTNND1-221ENST00000529873 USP16Q9Y5T5 823 aa9.78□□□□□ -0.84
CTNND1-221ENST00000529873 ABCC1P33527 1531 aa9.78□□□□□ -0.84
CTNND1-221ENST00000529873 RIMS2Q9UQ26 1411 aa9.78□□□□□ -0.84
CTNND1-221ENST00000529873 GTF2A1P52655 376 aaPredicted RBP9.78□□□□□ -0.84
CTNND1-221ENST00000529873 FERMT2Q96AC1 680 aa9.78□□□□□ -0.84
CTNND1-221ENST00000529873 CRACR2AQ9BSW2 395 aa9.78□□□□□ -0.84
CTNND1-221ENST00000529873 CABP5Q9NP86 173 aa9.78□□□□□ -0.84
CTNND1-221ENST00000529873 TCP11L1Q9NUJ3 509 aa9.78□□□□□ -0.84
CTNND1-221ENST00000529873 STAMBPO95630 424 aa9.78□□□□□ -0.84
CTNND1-221ENST00000529873 RFC4P35249 363 aa9.78□□□□□ -0.84
CTNND1-221ENST00000529873 LDHAL6AQ6ZMR3 332 aa9.78□□□□□ -0.84
CTNND1-221ENST00000529873 CCDC144CPQ8IYA2 1237 aa9.78□□□□□ -0.84
CTNND1-221ENST00000529873 CGNQ9P2M7 1197 aaKnown RBP9.78□□□□□ -0.84
CTNND1-221ENST00000529873 SHTN1A0MZ66 631 aa9.77□□□□□ -0.84
CTNND1-221ENST00000529873 TSPY2A6NKD2 308 aa9.77□□□□□ -0.84
CTNND1-221ENST00000529873 KIF18AQ8NI77 898 aa9.77□□□□□ -0.84
CTNND1-221ENST00000529873 NGLY1Q96IV0 654 aa9.77□□□□□ -0.84
CTNND1-221ENST00000529873 FAM83GA6ND36 823 aa9.77□□□□□ -0.85
CTNND1-221ENST00000529873 C6orf229H3BNL8 230 aa9.77□□□□□ -0.85
CTNND1-221ENST00000529873 CEBPAP49715 358 aaPredicted RBP9.77□□□□□ -0.85
CTNND1-221ENST00000529873 MPHOSPH6Q99547 160 aaKnown RBP9.77□□□□□ -0.85
CTNND1-221ENST00000529873 ZNF518AQ6AHZ1 1483 aa9.77□□□□□ -0.85
CTNND1-221ENST00000529873 ATP5J2-PTCD1G3V325 749 aa9.77□□□□□ -0.85
CTNND1-221ENST00000529873 GCOM1H8Y6P7 765 aaPredicted RBP9.77□□□□□ -0.85
CTNND1-221ENST00000529873 MYZAPP0CAP1 466 aa9.77□□□□□ -0.85
CTNND1-221ENST00000529873 IBSPP21815 317 aaPredicted RBP9.77□□□□□ -0.85
CTNND1-221ENST00000529873 MTIF2P46199 727 aaKnown RBP9.77□□□□□ -0.85
CTNND1-221ENST00000529873 ANAPC15P60006 121 aa9.77□□□□□ -0.85
CTNND1-221ENST00000529873 HDAC1Q13547 482 aaPredicted RBP9.77□□□□□ -0.85
CTNND1-221ENST00000529873 CCDC82Q8N4S0 544 aa9.77□□□□□ -0.85
CTNND1-221ENST00000529873 SLC26A6Q9BXS9 759 aa9.77□□□□□ -0.85
CTNND1-221ENST00000529873 A2MP01023 1474 aa9.77□□□□□ -0.85
CTNND1-221ENST00000529873 ZGPATQ8N5A5 531 aaKnown RBP9.77□□□□□ -0.85
CTNND1-221ENST00000529873 ZSCAN16Q9H4T2 348 aaPredicted RBP9.77□□□□□ -0.85
CTNND1-221ENST00000529873 RMND1Q9NWS8 449 aa9.77□□□□□ -0.85
CTNND1-221ENST00000529873 PPP4R3BQ5MIZ7 849 aa9.77□□□□□ -0.85
CTNND1-221ENST00000529873 GOPCQ9HD26 462 aa9.77□□□□□ -0.85
CTNND1-221ENST00000529873 CETN1Q12798 172 aa9.76□□□□□ -0.85
CTNND1-221ENST00000529873 UVSSAQ2YD98 709 aa9.76□□□□□ -0.85
CTNND1-221ENST00000529873 LUZP1Q86V48 1076 aa9.76□□□□□ -0.85
CTNND1-221ENST00000529873 PI4KAP2A4QPH2 592 aa9.76□□□□□ -0.85
CTNND1-221ENST00000529873 MCM5P33992 734 aa9.76□□□□□ -0.85
CTNND1-221ENST00000529873 KIF4BQ2VIQ3 1234 aa9.76□□□□□ -0.85
CTNND1-221ENST00000529873 CCDC40Q4G0X9 1142 aa9.76□□□□□ -0.85
CTNND1-221ENST00000529873 CKAP2LQ8IYA6 745 aa9.76□□□□□ -0.85
CTNND1-221ENST00000529873 PI4KAP1Q8N8J0 262 aa9.76□□□□□ -0.85
CTNND1-221ENST00000529873 CHPF2Q9P2E5 772 aa9.76□□□□□ -0.85
CTNND1-221ENST00000529873 AKAP4Q5JQC9 854 aa9.76□□□□□ -0.85
CTNND1-221ENST00000529873 TMC6Q7Z403 805 aa9.76□□□□□ -0.85
CTNND1-221ENST00000529873 CEP63Q96MT8 703 aa9.76□□□□□ -0.85
CTNND1-221ENST00000529873 CNNM2Q9H8M5 875 aa9.76□□□□□ -0.85
CTNND1-221ENST00000529873 ZNF219Q9P2Y4 722 aaPredicted RBP9.76□□□□□ -0.85
CTNND1-221ENST00000529873 KIAA0556O60303 1618 aa9.76□□□□□ -0.85
CTNND1-221ENST00000529873 MAP2K1Q02750 393 aaPredicted RBP9.76□□□□□ -0.85
CTNND1-221ENST00000529873 TDRD12Q587J7 1177 aaKnown RBP9.76□□□□□ -0.85
CTNND1-221ENST00000529873 UHRF1BP1LA0JNW5 1464 aa9.76□□□□□ -0.85
CTNND1-221ENST00000529873 ZFYP08048 801 aaPredicted RBP9.75□□□□□ -0.85
CTNND1-221ENST00000529873 UBE3BQ7Z3V4 1068 aa9.75□□□□□ -0.85
CTNND1-221ENST00000529873 MRPL50Q8N5N7 158 aaKnown RBP9.75□□□□□ -0.85
CTNND1-221ENST00000529873 ZFYVE9O95405 1425 aa9.75□□□□□ -0.85
CTNND1-221ENST00000529873 WDR7Q9Y4E6 1490 aa9.75□□□□□ -0.85
CTNND1-221ENST00000529873 GOLGA6L9A6NEM1 432 aa9.75□□□□□ -0.85
CTNND1-221ENST00000529873 UBE2HP62256 183 aa9.75□□□□□ -0.85
CTNND1-221ENST00000529873 ANKRD13DQ6ZTN6 518 aa9.75□□□□□ -0.85
CTNND1-221ENST00000529873 ZCRB1Q8TBF4 217 aaKnown RBP9.75□□□□□ -0.85
CTNND1-221ENST00000529873 CFAP57Q96MR6 1250 aa9.75□□□□□ -0.85
CTNND1-221ENST00000529873 LARP6Q9BRS8 491 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms