RNA–Protein interactions for RNA: ENST00000529724.1

PPP1CA-206, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 2

Gene PPP1CA, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-206ENST00000529724 ALDH1B1P30837 517 aa14.42□□□□□ -0.1
PPP1CA-206ENST00000529724 PKN2Q16513 984 aaKnown RBP14.42□□□□□ -0.1
PPP1CA-206ENST00000529724 ZC3H15Q8WU90 426 aaKnown RBP14.42□□□□□ -0.1
PPP1CA-206ENST00000529724 ZNF496Q96IT1 587 aaPredicted RBP14.42□□□□□ -0.1
PPP1CA-206ENST00000529724 AKAP11Q9UKA4 1901 aa14.42□□□□□ -0.1
PPP1CA-206ENST00000529724 A0A0C4DFX4 3053 aa14.41□□□□□ -0.1
PPP1CA-206ENST00000529724 CC2D2BQ6DHV5 1058 aa14.41□□□□□ -0.1
PPP1CA-206ENST00000529724 DZIP3Q86Y13 1208 aaKnown RBP14.41□□□□□ -0.1
PPP1CA-206ENST00000529724 TRPM4Q8TD43 1214 aa14.41□□□□□ -0.1
PPP1CA-206ENST00000529724 CSRNP1Q96S65 589 aa14.41□□□□□ -0.1
PPP1CA-206ENST00000529724 NPC1L1Q9UHC9 1359 aa14.41□□□□□ -0.1
PPP1CA-206ENST00000529724 HEG1Q9ULI3 1381 aa14.41□□□□□ -0.1
PPP1CA-206ENST00000529724 GMPSP49915 693 aaPredicted RBP14.4□□□□□ -0.1
PPP1CA-206ENST00000529724 CDCA8Q53HL2 280 aa14.4□□□□□ -0.1
PPP1CA-206ENST00000529724 CLEC4GQ6UXB4 293 aa14.4□□□□□ -0.1
PPP1CA-206ENST00000529724 NIM1KQ8IY84 436 aa14.4□□□□□ -0.1
PPP1CA-206ENST00000529724 CCDC102AQ96A19 550 aa14.4□□□□□ -0.1
PPP1CA-206ENST00000529724 CEP290O15078 2479 aa14.4□□□□□ -0.1
PPP1CA-206ENST00000529724 SLC10A3P09131 477 aa14.39□□□□□ -0.11
PPP1CA-206ENST00000529724 CXCL9Q07325 125 aa14.39□□□□□ -0.11
PPP1CA-206ENST00000529724 CRY2Q49AN0 593 aa14.39□□□□□ -0.11
PPP1CA-206ENST00000529724 TPTE2Q6XPS3 522 aa14.39□□□□□ -0.11
PPP1CA-206ENST00000529724 USP48Q86UV5 1035 aa14.39□□□□□ -0.11
PPP1CA-206ENST00000529724 TTC5Q8N0Z6 440 aa14.39□□□□□ -0.11
PPP1CA-206ENST00000529724 TEX13AQ9BXU3 409 aaPredicted RBP14.39□□□□□ -0.11
PPP1CA-206ENST00000529724 ZNF157P51786 506 aaPredicted RBP14.38□□□□□ -0.11
PPP1CA-206ENST00000529724 HTTP42858 3142 aa14.38□□□□□ -0.11
PPP1CA-206ENST00000529724 SHTN1A0MZ66 631 aa14.37□□□□□ -0.11
PPP1CA-206ENST00000529724 IL13P35225 146 aa14.37□□□□□ -0.11
PPP1CA-206ENST00000529724 ZNF296Q8WUU4 475 aaPredicted RBP14.37□□□□□ -0.11
PPP1CA-206ENST00000529724 GBA2Q9HCG7 927 aaPredicted RBP14.37□□□□□ -0.11
PPP1CA-206ENST00000529724 CDHR2Q9BYE9 1310 aa14.37□□□□□ -0.11
PPP1CA-206ENST00000529724 KIAA0100Q14667 2235 aaKnown RBP14.37□□□□□ -0.11
PPP1CA-206ENST00000529724 ABCC12Q96J65 1359 aa14.36□□□□□ -0.11
PPP1CA-206ENST00000529724 FAM177BA6PVY3 158 aa14.36□□□□□ -0.11
PPP1CA-206ENST00000529724 PPIP5K2O43314 1243 aa14.36□□□□□ -0.11
PPP1CA-206ENST00000529724 PIP4K2AP48426 406 aaPredicted RBP14.36□□□□□ -0.11
PPP1CA-206ENST00000529724 AOC3Q16853 763 aa14.36□□□□□ -0.11
PPP1CA-206ENST00000529724 ZNF790Q6PG37 636 aa14.36□□□□□ -0.11
PPP1CA-206ENST00000529724 FBXO46Q6PJ61 603 aaPredicted RBP14.36□□□□□ -0.11
PPP1CA-206ENST00000529724 NIP7Q9Y221 180 aaKnown RBP eCLIP14.36□□□□□ -0.11
PPP1CA-206ENST00000529724 MTHFSDQ2M296 383 aaKnown RBP14.35□□□□□ -0.11
PPP1CA-206ENST00000529724 GRIPAP1Q4V328 841 aa14.35□□□□□ -0.11
PPP1CA-206ENST00000529724 NPM2Q86SE8 214 aaKnown RBP14.35□□□□□ -0.11
PPP1CA-206ENST00000529724 HDAC9Q9UKV0 1011 aa14.35□□□□□ -0.11
PPP1CA-206ENST00000529724 ZNRF3Q9ULT6 936 aa14.35□□□□□ -0.11
PPP1CA-206ENST00000529724 COLQQ9Y215 455 aaPredicted RBP14.35□□□□□ -0.11
PPP1CA-206ENST00000529724 RIC1Q4ADV7 1423 aa14.34□□□□□ -0.11
PPP1CA-206ENST00000529724 HOXA10P31260 410 aaPredicted RBP14.34□□□□□ -0.11
PPP1CA-206ENST00000529724 C2orf69Q8N8R5 385 aa14.34□□□□□ -0.11
PPP1CA-206ENST00000529724 ZNF652Q9Y2D9 606 aa14.34□□□□□ -0.11
PPP1CA-206ENST00000529724 BRCA2P51587 3418 aa14.33□□□□□ -0.12
PPP1CA-206ENST00000529724 POTEFA5A3E0 1075 aa14.33□□□□□ -0.12
PPP1CA-206ENST00000529724 ADM5C9JUS6 153 aa14.32□□□□□ -0.12
PPP1CA-206ENST00000529724 RGL2O15211 777 aa14.32□□□□□ -0.12
PPP1CA-206ENST00000529724 KRT26Q7Z3Y9 468 aa14.32□□□□□ -0.12
PPP1CA-206ENST00000529724 RASAL3Q86YV0 1011 aa14.32□□□□□ -0.12
PPP1CA-206ENST00000529724 REM2Q8IYK8 340 aaPredicted RBP14.32□□□□□ -0.12
PPP1CA-206ENST00000529724 FMNL2Q96PY5 1086 aa14.32□□□□□ -0.12
PPP1CA-206ENST00000529724 BCL2L13Q9BXK5 485 aa14.32□□□□□ -0.12
PPP1CA-206ENST00000529724 CNOT7Q9UIV1 285 aaKnown RBP14.32□□□□□ -0.12
PPP1CA-206ENST00000529724 TCERG1O14776 1098 aaKnown RBP14.31□□□□□ -0.12
PPP1CA-206ENST00000529724 PPEF1O14829 653 aaPredicted RBP14.31□□□□□ -0.12
PPP1CA-206ENST00000529724 TBC1D8O95759 1140 aa14.31□□□□□ -0.12
PPP1CA-206ENST00000529724 SLC17A8Q8NDX2 589 aa14.31□□□□□ -0.12
PPP1CA-206ENST00000529724 VPS33BQ9H267 617 aa14.31□□□□□ -0.12
PPP1CA-206ENST00000529724 USP16Q9Y5T5 823 aa14.31□□□□□ -0.12
PPP1CA-206ENST00000529724 KIF7Q2M1P5 1343 aa14.31□□□□□ -0.12
PPP1CA-206ENST00000529724 SIPA1L3O60292 1781 aaPredicted RBP14.31□□□□□ -0.12
PPP1CA-206ENST00000529724 RANBP2P49792 3224 aaKnown RBP14.31□□□□□ -0.12
PPP1CA-206ENST00000529724 POLR2AP24928 1970 aaKnown RBP14.31□□□□□ -0.12
PPP1CA-206ENST00000529724 RAD17O75943 681 aa14.3□□□□□ -0.12
PPP1CA-206ENST00000529724 NUTM1Q86Y26 1132 aa14.3□□□□□ -0.12
PPP1CA-206ENST00000529724 MICALL2Q8IY33 904 aa14.3□□□□□ -0.12
PPP1CA-206ENST00000529724 COL6A3P12111 3177 aa14.3□□□□□ -0.12
PPP1CA-206ENST00000529724 CENPFP49454 3210 aa14.3□□□□□ -0.12
PPP1CA-206ENST00000529724 KCNQ3O43525 872 aa14.29□□□□□ -0.12
PPP1CA-206ENST00000529724 EGFRP00533 1210 aa14.29□□□□□ -0.12
PPP1CA-206ENST00000529724 HMOX1P09601 288 aa14.29□□□□□ -0.12
PPP1CA-206ENST00000529724 GTF2E1P29083 439 aaPredicted RBP14.29□□□□□ -0.12
PPP1CA-206ENST00000529724 HLFQ16534 295 aa14.29□□□□□ -0.12
PPP1CA-206ENST00000529724 NOM1Q5C9Z4 860 aaKnown RBP14.29□□□□□ -0.12
PPP1CA-206ENST00000529724 SAMD7Q7Z3H4 446 aa14.29□□□□□ -0.12
PPP1CA-206ENST00000529724 IL17REQ8NFR9 667 aa14.29□□□□□ -0.12
PPP1CA-206ENST00000529724 RPGRQ92834 1020 aaKnown RBP14.29□□□□□ -0.12
PPP1CA-206ENST00000529724 CRAMP1Q96RY5 1269 aa14.29□□□□□ -0.12
PPP1CA-206ENST00000529724 RTFDC1Q9BY42 306 aaPredicted RBP14.29□□□□□ -0.12
PPP1CA-206ENST00000529724 PRAMEF22A3QJZ6 481 aa14.28□□□□□ -0.12
PPP1CA-206ENST00000529724 GPR25O00155 361 aa14.28□□□□□ -0.12
PPP1CA-206ENST00000529724 TNIP1Q15025 636 aa14.28□□□□□ -0.12
PPP1CA-206ENST00000529724 RBBP6Q7Z6E9 1792 aaKnown RBP14.27□□□□□ -0.12
PPP1CA-206ENST00000529724 YDJCA8MPS7 323 aa14.27□□□□□ -0.13
PPP1CA-206ENST00000529724 NBPF26B4DH59 902 aa14.27□□□□□ -0.13
PPP1CA-206ENST00000529724 H7C1D1 291 aa14.27□□□□□ -0.13
PPP1CA-206ENST00000529724 KIAA2012Q0VF49 1180 aa14.27□□□□□ -0.13
PPP1CA-206ENST00000529724 TEFQ10587 303 aa14.27□□□□□ -0.13
PPP1CA-206ENST00000529724 TBC1D10BQ4KMP7 808 aaPredicted RBP14.27□□□□□ -0.13
PPP1CA-206ENST00000529724 NBPF10Q6P3W6 841 aaKnown RBP14.27□□□□□ -0.13
PPP1CA-206ENST00000529724 C3orf67Q6ZVT6 689 aa14.27□□□□□ -0.13
PPP1CA-206ENST00000529724 PAPPA2Q9BXP8 1791 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms